Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0198 Marchantia polymorpha HOM05D006914 ORTHO05D008583 7.6e-121 437.6 289 100.0
SMO304G0019 Selaginella moellendorffii HOM05D006914 ORTHO05D008583 9.2e-26 121.7 73 84.9
Pp3c19_17380 Physcomitrium patens HOM05D006914 ORTHO05D008583 7.8e-25 118.6 75 81.3
AagrBONN_evm.TU.Sc2ySwM_362.2477 Anthoceros agrestis HOM05D006914 ORTHO05D008583 6.6e-24 115.5 80 75.0
Ciclev10009995m.g Citrus clementina HOM05D006914 ORTHO05D008583 9.5e-23 111.7 78 69.2
EL10Ac3g05865 Beta vulgaris HOM05D006914 ORTHO05D008583 2.1e-22 110.5 78 70.5
AT5G57860 Arabidopsis thaliana HOM05D006914 ORTHO05D008583 2.8e-22 110.2 78 69.2
Actinidia23563 Actinidia chinensis HOM05D006914 ORTHO05D008583 3.6e-22 109.8 78 71.8
RcHm_v2.0_Chr2g0085261 Rosa chinensis HOM05D006914 ORTHO05D008583 3.6e-22 109.8 85 63.5
TWI63G1652 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 3.6e-22 109.8 78 70.5
Actinidia28379 Actinidia chinensis HOM05D006914 ORTHO05D008583 4.7e-22 109.4 77 70.1
Ah.13g066550 Amaranthus hybridus HOM05D006914 ORTHO05D008583 4.7e-22 109.4 77 70.1
Dinv41349 Davidia involucrata HOM05D006914 ORTHO05D008583 4.7e-22 109.4 78 69.2
Sp6g19550 Schrenkiella parvula HOM05D006914 ORTHO05D008583 4.7e-22 109.4 78 69.2
Gohir.D08G256600 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.2e-22 109.0 78 69.2
Gorai.004G273700 Gossypium raimondii HOM05D006914 ORTHO05D008583 6.2e-22 109.0 78 69.2
AUR62015440 Chenopodium quinoa HOM05D006914 ORTHO05D008583 8.1e-22 108.6 78 69.2
FAN23G1758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 8.1e-22 108.6 85 62.4
FAN26G2758 Fragaria x ananassa HOM05D006914 ORTHO05D008583 8.1e-22 108.6 85 62.4
Aqoxy5G02159 Aquilegia oxysepala HOM05D006914 ORTHO05D008583 1.1e-21 108.2 93 61.3
Nn8g40004 Nelumbo nucifera HOM05D006914 ORTHO05D008583 1.1e-21 108.2 78 69.2
Atru.chr7.325 Acer truncatum HOM05D006914 ORTHO05D008583 1.4e-21 107.8 78 69.2
CSS0049762 Camellia sinensis var. sinensis HOM05D006914 ORTHO05D008583 1.4e-21 107.8 78 67.9
Thecc.09G152600 Theobroma cacao HOM05D006914 ORTHO05D008583 1.4e-21 107.8 78 67.9
CARHR271600 Cardamine hirsuta HOM05D006914 ORTHO05D008583 1.8e-21 107.5 78 67.9
PSO111G0010 Papaver somniferum HOM05D006914 ORTHO05D008583 1.8e-21 107.5 78 70.5
Cpa.g.sc46.184 Carica papaya HOM05D006914 ORTHO05D008583 2.3e-21 107.1 78 69.2
MD15G1149500 Malus domestica HOM05D006914 ORTHO05D008583 2.3e-21 107.1 85 62.4
TAR626G0439 Trochodendron aralioides HOM05D006914 ORTHO05D008583 2.3e-21 107.1 75 70.7
GSVIVG01008452001 Vitis vinifera HOM05D006914 ORTHO05D008583 2.3e-21 107.1 102 54.9
Carub.0008s1839 Capsella rubella HOM05D006914 ORTHO05D008583 3.1e-21 106.7 78 65.4
FvH4_1g00640 Fragaria vesca HOM05D006914 ORTHO05D008583 3.1e-21 106.7 85 62.4
Hma1.2p1_2085F.1_g313670 Hydrangea macrophylla HOM05D006914 ORTHO05D008583 3.1e-21 106.7 84 64.3
MELO3C004120.2 Cucumis melo HOM05D006914 ORTHO05D008583 4.0e-21 106.3 78 69.2
CsaV3_2G007660 Cucumis sativus L. HOM05D006914 ORTHO05D008583 4.0e-21 106.3 78 69.2
TWI34G0278 Tripterygium wilfordii HOM05D006914 ORTHO05D008583 5.2e-21 105.9 85 61.2
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 6.8e-21 105.5 83 60.2
QL02p093962 Quercus lobata HOM05D006914 ORTHO05D008583 6.8e-21 105.5 77 67.5
Hund04582 Selenicereus undatus HOM05D000185 ORTHO05D000105 6.8e-21 105.5 84 63.1
TAR383G0505 Trochodendron aralioides HOM05D006914 ORTHO05D008583 6.8e-21 105.5 90 62.2
CANSAT56G0295 Cannabis sativa HOM05D006914 ORTHO05D008583 8.9e-21 105.1 76 69.7
Cfa020795 Carpinus fangiana HOM05D006914 ORTHO05D008583 8.9e-21 105.1 84 58.3
Duzib150G1072 Durio zibethinus HOM05D006914 ORTHO05D008583 8.9e-21 105.1 76 68.4
Manes.14G142700 Manihot esculenta HOM05D006914 ORTHO05D008583 8.9e-21 105.1 78 69.2
Prupe.7G265800 Prunus persica HOM05D006914 ORTHO05D008583 8.9e-21 105.1 85 62.4
Aa31LG3G13700 Aethionema arabicum HOM05D006914 ORTHO05D008583 1.2e-20 104.8 85 58.8
AL8G33910 Arabidopsis lyrata HOM05D006914 ORTHO05D008583 1.2e-20 104.8 76 67.1
MSTRG.10711 Avicennia marina HOM05D006914 ORTHO05D008583 1.2e-20 104.8 83 62.7
AUR62002229 Chenopodium quinoa HOM05D006914 ORTHO05D008583 1.2e-20 104.8 76 68.4
COL.COLO4_23940 Corchorus olitorius HOM05D006914 ORTHO05D008583 1.2e-20 104.8 76 69.7
Potri.006G181400 Populus trichocarpa HOM05D006914 ORTHO05D008583 1.2e-20 104.8 85 62.4
CiPaw.15G165400 Carya illinoinensis HOM05D006914 ORTHO05D008583 1.5e-20 104.4 85 61.2
Ca_02367_v3 Cicer arietinum L. HOM05D006914 ORTHO05D008583 1.5e-20 104.4 85 62.4
ClCG02G014340 Citrullus lanatus HOM05D006914 ORTHO05D008583 1.5e-20 104.4 78 67.9
Thhalv10015128m.g Eutrema salsugineum HOM05D006914 ORTHO05D008583 1.5e-20 104.4 78 64.1
HanXRQChr03g0066101 Helianthus annuus HOM05D006914 ORTHO05D008583 2.0e-20 104.0 78 67.9
MD02G1005200 Malus domestica HOM05D006914 ORTHO05D008583 2.0e-20 104.0 85 61.2
Haze_19153 Corylus avellana HOM05D006914 ORTHO05D008583 2.6e-20 103.6 75 64.0
Lsat_1_v5_gn_7_49520 Lactuca sativa HOM05D006914 ORTHO05D008583 2.6e-20 103.6 78 66.7
Oeu055276.1 Olea europaea HOM05D006914 ORTHO05D008583 3.4e-20 103.2 96 57.3
A02p08150 Brassica napus HOM05D006914 ORTHO05D008583 4.4e-20 102.8 78 64.1
A03p12500 Brassica napus HOM05D006914 ORTHO05D008583 4.4e-20 102.8 78 64.1
Rhsim03G0258700 Rhododendron simsii HOM05D000079 ORTHO05D000211 4.4e-20 102.8 75 68.0
BraA02t05889Z Brassica rapa HOM05D006914 ORTHO05D008583 5.8e-20 102.4 77 63.6
Peaxi162Scf00156g01316 Petunia axillaris HOM05D006914 ORTHO05D008583 5.8e-20 102.4 76 67.1
ATR0763G197 Amborella trichopoda HOM05D006914 ORTHO05D008583 7.6e-20 102.1 75 68.0
CBR_g51779 Chara braunii HOM05D006914 ORTHO05D008583 7.6e-20 102.1 76 65.8
Nitab4.5_0009003g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.6e-20 102.1 77 64.9
vmacro06059 Vaccinium macrocarpon HOM05D000079 ORTHO05D000211 7.6e-20 102.1 74 70.3
Cc06_g14590 Coffea canephora HOM05D006914 ORTHO05D008583 1.3e-19 101.3 76 68.4
Duzib187G0910 Durio zibethinus HOM05D006914 ORTHO05D008583 1.3e-19 101.3 76 67.1
Migut.K00305 Erythranthe guttata HOM05D006914 ORTHO05D008583 1.3e-19 101.3 83 60.2
C02p13800 Brassica napus HOM05D006914 ORTHO05D008583 1.7e-19 100.9 76 64.5
BolC2t07499H Brassica oleracea HOM05D006914 ORTHO05D008583 1.7e-19 100.9 76 64.5
SGA_v2.0_scaffold222G42803 Striga asiatica HOM05D006914 ORTHO05D008583 1.7e-19 100.9 74 67.6
C09p49750 Brassica napus HOM05D006914 ORTHO05D008583 2.2e-19 100.5 78 61.5
BolC3t13912H Brassica oleracea HOM05D006914 ORTHO05D008583 2.2e-19 100.5 76 64.5
Eucgr.C02509 Eucalyptus grandis HOM05D006914 ORTHO05D008583 2.2e-19 100.5 75 64.0
Sed0012601 Sechium edule HOM05D006914 ORTHO05D008583 2.2e-19 100.5 78 66.7
Sed0026010 Sechium edule HOM05D006914 ORTHO05D008583 2.2e-19 100.5 78 65.4
Glyma.04G155300 Glycine max HOM05D006914 ORTHO05D008583 2.9e-19 100.1 85 60.0
unitig_748.g7196 Utricularia gibba HOM05D006914 ORTHO05D008583 3.7e-19 99.8 83 59.0
HPP92_020604 Vanilla planifolia HOM05D006914 ORTHO05D008583 3.7e-19 99.8 77 63.6
BraA03t10565Z Brassica rapa HOM05D006914 ORTHO05D008583 4.9e-19 99.4 76 63.2
CDE05G0490 Ceratophyllum demersum HOM05D006914 ORTHO05D008583 4.9e-19 99.4 78 60.3
Nitab4.5_0001448g0020 Nicotiana tabacum HOM05D006914 ORTHO05D008583 4.9e-19 99.4 77 62.3
Os03g0364000 Oryza sativa ssp. japonica HOM05D006914 ORTHO05D008583 6.4e-19 99.0 84 60.7
PGR102G2895 Punica granatum HOM05D006914 ORTHO05D008583 6.4e-19 99.0 78 61.5
PGSC0003DMG400023462 Solanum tuberosum HOM05D006914 ORTHO05D008583 8.3e-19 98.6 75 62.7
ECA240G0809 Erigeron canadensis HOM05D006914 ORTHO05D008583 1.1e-18 98.2 76 64.5
Lalb_Chr11g0072501 Lupinus albus HOM05D006914 ORTHO05D008583 1.1e-18 98.2 78 62.8
Oeu021334.1 Olea europaea HOM05D006914 ORTHO05D008583 1.1e-18 98.2 76 64.5
Pp3c17_5060 Physcomitrium patens HOM05D006914 ORTHO05D008583 1.1e-18 98.2 75 70.7
Sopen05g034470 Solanum pennellii HOM05D006914 ORTHO05D008583 1.1e-18 98.2 83 56.6
CAN.G694.81 Capsicum annuum HOM05D006914 ORTHO05D008583 3.2e-18 96.7 74 63.5
Glyma.06G225000 Glycine max HOM05D006914 ORTHO05D008583 3.2e-18 96.7 85 57.6
Lj6g0027463 Lotus japonicus HOM05D006914 ORTHO05D008583 3.2e-18 96.7 85 55.3
TPR.G25932 Trifolium pratense HOM05D006914 ORTHO05D008583 3.2e-18 96.7 85 55.3
Phvul.007G242700 Phaseolus vulgaris HOM05D006914 ORTHO05D008583 4.1e-18 96.3 78 62.8
VMungo0720G1978 Vigna mungo HOM05D006914 ORTHO05D008583 5.4e-18 95.9 85 57.6
Nitab4.5_0000233g0040 Nicotiana tabacum HOM05D006914 ORTHO05D008583 7.1e-18 95.5 77 61.0
Zm00001eb329210 Zea mays HOM05D006914 ORTHO05D008583 7.1e-18 95.5 76 61.8
arahy.Tifrunner.gnm1.ann1.S2MTQV Arachis hypogaea HOM05D006914 ORTHO05D008583 9.2e-18 95.1 73 65.8
AagrBONN_evm.TU.Sc2ySwM_228.3148 Anthoceros agrestis HOM05D006914 ORTHO05D008583 2.1e-17 94.0 78 61.5
arahy.Tifrunner.gnm1.ann1.6E7PQ4 Arachis hypogaea HOM05D006914 ORTHO05D008583 2.1e-17 94.0 73 64.4
Psat1g017920 Pisum sativum HOM05D006914 ORTHO05D008583 4.6e-17 92.8 75 62.7
Sc13g0007320 Simmondsia chinensis HOM05D006914 ORTHO05D008583 2.3e-16 90.5 64 75.0
Medtr2g046160 Medicago truncatula HOM05D006914 ORTHO05D008583 3.0e-16 90.1 85 51.8
Cre12.g554750 Chlamydomonas reinhardtii HOM05D006914 ORTHO05D008583 3.9e-16 89.7 78 57.7
Gohir.A08G236100 Gossypium hirsutum HOM05D006914 ORTHO05D008583 6.6e-16 89.0 64 67.2
BcaB05g22379 Brassica carinata HOM05D006914 ORTHO05D008583 2.8e-14 83.6 76 56.6
PSO782G4630 Papaver somniferum HOM05D006914 ORTHO05D008583 1.1e-13 81.6 78 55.1
Aa31LG1G14450 Aethionema arabicum HOM05D006914 ORTHO05D008583 4.9e-11 72.8 76 48.7
PRCOL_00002080 Prasinoderma coloniale HOM05D006914 ORTHO05D008583 6.4e-11 72.4 78 55.1
Haze_19154 Corylus avellana HOM05D002983 ORTHO05D003451 1.1e-10 71.6 62 59.7
SHI02838 Sapria himalayana HOM05D006914 ORTHO05D008583 1.1e-07 61.6 61 52.5
MCO12G243 Micromonas commoda HOM05D006914 ORTHO05D008583 1.5e-07 61.2 108 38.0
C08p16940 Brassica napus HOM05D006914 ORTHO05D008583 3.6e-06 56.6 37 67.6


User provided reference genes

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