Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 1.5e-281 972.2 501 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 5.2e-85 319.3 440 43.4
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 5.6e-79 299.3 452 43.1
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 9.6e-63 245.4 440 38.2
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 7.8e-57 225.7 447 34.5
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 1.0e-56 225.3 399 37.8
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 8.7e-56 222.2 395 35.9
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 9.6e-55 218.8 402 35.8
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 9.0e-53 212.2 353 36.5
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 1.2e-52 211.8 469 34.8
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 1.5e-52 211.5 395 35.9
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 1.5e-52 211.5 362 40.1
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 5.8e-52 209.5 347 37.2
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 5.8e-52 209.5 463 34.1
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 7.6e-52 209.1 372 37.1
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 9.9e-52 208.8 401 37.7
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 9.9e-52 208.8 413 36.3
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.3e-51 208.4 364 36.3
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 1.3e-51 208.4 468 35.5
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 4.9e-51 206.5 356 38.8
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 8.4e-51 205.7 400 34.5
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 8.4e-51 205.7 348 36.8
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 1.4e-50 204.9 436 33.7
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 1.4e-50 204.9 356 35.4
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 5.4e-50 203.0 413 35.1
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 5.4e-50 203.0 376 35.6
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 1.2e-49 201.8 413 35.1
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 1.6e-49 201.4 406 35.5
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 1.6e-49 201.4 351 37.9
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.1e-49 201.1 400 36.0
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 4.6e-49 199.9 357 35.3
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 6.0e-49 199.5 393 34.6
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 6.0e-49 199.5 403 36.0
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 7.9e-49 199.1 417 32.6
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 1.3e-48 198.4 442 33.3
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 1.3e-48 198.4 438 33.8
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 3.0e-48 197.2 413 34.9
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 3.0e-48 197.2 409 34.5
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 3.9e-48 196.8 454 31.9
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 6.7e-48 196.1 352 37.5
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 6.7e-48 196.1 353 37.7
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 1.5e-47 194.9 460 33.3
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 1.9e-47 194.5 412 33.3
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 2.5e-47 194.1 421 34.2
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 3.3e-47 193.7 359 33.7
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 4.3e-47 193.4 357 36.7
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 7.4e-47 192.6 480 32.9
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 1.3e-46 191.8 412 34.0
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 1.3e-46 191.8 441 32.7
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 1.3e-46 191.8 465 31.6
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 1.3e-46 191.8 357 36.1
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 1.6e-46 191.4 357 34.5
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 2.1e-46 191.0 279 42.7
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 2.8e-46 190.7 281 41.6
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 3.7e-46 190.3 465 32.5
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 4.8e-46 189.9 359 35.4
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 6.2e-46 189.5 410 34.6
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 6.2e-46 189.5 360 35.0
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 8.1e-46 189.1 412 33.7
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 8.1e-46 189.1 355 36.6
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 1.1e-45 188.7 355 35.8
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 1.1e-45 188.7 355 35.8
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 3.1e-45 187.2 359 32.9
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 4.0e-45 186.8 443 31.6
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 9.0e-45 185.7 412 34.0
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 9.0e-45 185.7 357 34.5
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 1.2e-44 185.3 485 30.1
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 2.0e-44 184.5 353 35.7
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 2.6e-44 184.1 334 35.9
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 3.4e-44 183.7 357 33.6
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 4.5e-44 183.3 357 33.3
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 7.6e-44 182.6 357 35.0
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 1.3e-43 181.8 358 36.6
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.3e-43 181.8 361 33.2
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 1.7e-43 181.4 219 43.8
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 2.2e-43 181.0 439 31.9
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 3.8e-43 180.3 363 33.9
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 3.8e-43 180.3 443 31.2
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.1e-42 178.7 360 36.4
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 1.1e-42 178.7 363 37.2
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 1.9e-42 177.9 370 33.5
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 3.2e-42 177.2 353 34.3
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 2.1e-41 174.5 363 36.6
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 4.6e-41 173.3 360 35.6
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 4.6e-41 173.3 376 34.0
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 3.0e-40 170.6 351 33.9
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 2.5e-39 167.5 400 31.0
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 3.3e-39 167.2 371 31.5
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 2.1e-38 164.5 391 29.9
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 6.5e-35 152.9 347 32.0
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 6.7e-32 142.9 202 42.6
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 1.5e-31 141.7 197 39.6
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 3.3e-31 140.6 163 47.9
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 5.7e-31 139.8 393 30.5
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 9.7e-31 139.0 160 47.5
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 1.3e-30 138.7 393 30.3
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 1.2e-28 132.1 165 47.3
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.1e-26 125.6 355 29.3
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.1e-26 125.6 355 29.3
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 7.2e-26 122.9 228 34.6
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 1.7e-19 101.7 295 28.5
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 2.2e-19 101.3 126 47.6
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 1.4e-18 98.6 297 30.3
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 9.7e-15 85.9 372 27.4
CBR_g49583 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-12 77.4 265 31.3
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 1.3e-11 75.5 326 26.4
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.2e-11 74.7 73 53.4
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 1.9e-10 71.6 320 23.8
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 4.2e-10 70.5 72 61.1
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 5.5e-10 70.1 83 45.8
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 2.2e-06 58.2 218 30.3


User provided reference genes

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