Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0145 Marchantia polymorpha HOM05D008307 ORTHO05D010374 0.0e+00 1316.6 687 100.0
Pp3c6_16530 Physcomitrium patens HOM05D008307 ORTHO05D010374 1.2e-71 275.4 627 32.5
AagrBONN_evm.TU.Sc2ySwM_369.432 Anthoceros agrestis HOM05D008307 ORTHO05D010374 5.5e-61 240.0 705 30.6
Pp3c5_17310 Physcomitrium patens HOM05D008307 ORTHO05D010374 2.7e-60 237.7 607 32.5
SMO165G0083 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.9e-45 188.3 762 27.8
SMO329G0060 Selaginella moellendorffii HOM05D008307 ORTHO05D010374 1.4e-40 172.2 615 28.5
ATR0736G143 Amborella trichopoda HOM05D008307 ORTHO05D010374 1.4e-27 129.0 355 29.6
SEGI_00673 Sequoiadendron giganteum HOM05D008307 ORTHO05D010374 1.4e-27 129.0 475 26.9
SEGI_31757 Sequoiadendron giganteum HOM05D008757 ORTHO05D010583 7.3e-21 106.7 206 32.0
Cfa014722 Carpinus fangiana HOM05D008307 ORTHO05D010374 1.2e-18 99.4 346 27.5
Rhsim04G0177000 Rhododendron simsii HOM05D008307 ORTHO05D010374 2.9e-17 94.7 299 27.1
Haze_11405 Corylus avellana HOM05D008307 ORTHO05D010374 3.7e-17 94.4 345 26.7
MBI07_g31095_MAGBIO Magnolia biondii HOM05D008307 ORTHO05D010374 9.2e-16 89.7 410 25.6
Aqoxy7G00920 Aquilegia oxysepala HOM05D008307 ORTHO05D010374 2.1e-15 88.6 287 26.5
Dinv29844 Davidia involucrata HOM05D008307 ORTHO05D010374 5.1e-14 84.0 403 24.8
RcHm_v2.0_Chr4g0393941 Rosa chinensis HOM05D008307 ORTHO05D010374 5.1e-14 84.0 300 25.7
Migut.N00284 Erythranthe guttata HOM05D008307 ORTHO05D010374 6.6e-14 83.6 394 25.4
TWI73G0959 Tripterygium wilfordii HOM05D008307 ORTHO05D010374 1.1e-13 82.8 296 28.7
QL06p018536 Quercus lobata HOM05D008307 ORTHO05D010374 2.5e-13 81.6 414 26.3
vmacro08510 Vaccinium macrocarpon HOM05D008307 ORTHO05D010374 9.5e-13 79.7 306 27.8
MD16G1220900 Malus domestica HOM05D008307 ORTHO05D010374 4.7e-12 77.4 296 25.0
CARHR099340 Cardamine hirsuta HOM05D008307 ORTHO05D010374 1.1e-11 76.3 331 22.7
Peaxi162Scf00041g00209 Petunia axillaris HOM05D008307 ORTHO05D010374 1.1e-11 76.3 300 24.0
FvH4_4g03920 Fragaria vesca HOM05D008307 ORTHO05D010374 1.8e-11 75.5 280 25.0
FAN22G1022 Fragaria x ananassa HOM05D000478 ORTHO05D010374 2.3e-11 75.1 280 25.0
THA.LOC104822237 Tarenaya hassleriana HOM05D008307 ORTHO05D010374 4.0e-11 74.3 295 22.7
Actinidia35796 Actinidia chinensis HOM05D008307 ORTHO05D010374 5.2e-11 73.9 573 24.3
BraA07t28701Z Brassica rapa HOM05D008307 ORTHO05D010374 1.2e-10 72.8 295 24.1
Nitab4.5_0000044g0470 Nicotiana tabacum HOM05D008307 ORTHO05D010374 1.5e-10 72.4 294 25.9
A07p09070 Brassica napus HOM05D008307 ORTHO05D010374 4.4e-10 70.9 295 24.1
Potri.010G070001 Populus trichocarpa HOM05D008307 ORTHO05D010374 4.4e-10 70.9 441 23.6
Solyc09g090290.3 Solanum lycopersicum HOM05D008307 ORTHO05D010374 5.8e-10 70.5 300 24.3
C07p14040 Brassica napus HOM05D008307 ORTHO05D010374 9.9e-10 69.7 295 24.4
Prupe.1G041400 Prunus persica HOM05D008307 ORTHO05D010374 3.8e-09 67.8 143 30.8
BcaC06g35512 Brassica carinata HOM05D008307 ORTHO05D010374 4.9e-09 67.4 295 24.1
BolC7t41901H Brassica oleracea HOM05D008307 ORTHO05D010374 4.9e-09 67.4 295 24.1
ATR0706G029 Amborella trichopoda HOM05D008757 ORTHO05D010583 6.4e-09 67.0 240 22.9
AL3G38030 Arabidopsis lyrata HOM05D008307 ORTHO05D010374 6.4e-09 67.0 331 22.1
Sopen09g033190 Solanum pennellii HOM05D008307 ORTHO05D010374 8.4e-09 66.6 300 24.0
CSS0044876 Camellia sinensis var. sinensis HOM05D008307 ORTHO05D010374 1.1e-08 66.2 103 32.0
PGR031G2080 Punica granatum HOM05D008307 ORTHO05D010374 3.2e-08 64.7 167 26.3
TPR.G31356 Trifolium pratense HOM05D008057 ORTHO05D003476 1.6e-07 62.4 159 30.2
Thhalv10020149m.g Eutrema salsugineum HOM05D008307 ORTHO05D010374 2.1e-07 62.0 204 25.0
Gohir.D02G118700 Gossypium hirsutum HOM05D008057 ORTHO05D003476 4.6e-07 60.8 75 48.0
TAR365G0480 Trochodendron aralioides HOM05D008307 ORTHO05D010374 7.8e-07 60.1 596 23.5
Gohir.A03G090600 Gossypium hirsutum HOM05D008057 ORTHO05D003476 1.3e-06 59.3 75 46.7
Gorai.005G135100 Gossypium raimondii HOM05D008057 ORTHO05D003476 1.3e-06 59.3 75 46.7
Cpa.g.sc124.3 Carica papaya HOM05D008057 ORTHO05D003476 1.7e-06 58.9 129 35.7
Psat1g117960 Pisum sativum HOM05D008057 ORTHO05D003476 2.3e-06 58.5 77 40.3
ClCG03G001720 Citrullus lanatus HOM05D008057 ORTHO05D003476 3.0e-06 58.2 153 28.1
TAR629G2050 Trochodendron aralioides HOM05D008057 ORTHO05D003476 6.6e-06 57.0 75 42.7


User provided reference genes

Program Settings