Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 4.0e-81 304.7 151 100.0
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 2.2e-15 86.3 92 42.4
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 4.0e-12 75.5 96 40.6
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 8.8e-12 74.3 94 44.7
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 2.6e-11 72.8 74 45.9
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 4.4e-11 72.0 83 44.6
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 4.4e-11 72.0 79 48.1
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 9.7e-11 70.9 88 43.2
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 9.7e-11 70.9 92 46.7
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 1.7e-10 70.1 101 41.6
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 2.2e-10 69.7 59 54.2
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 2.2e-10 69.7 89 48.3
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 3.7e-10 68.9 107 41.1
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 3.7e-10 68.9 110 43.6
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 4.8e-10 68.6 90 43.3
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 8.2e-10 67.8 104 30.8
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 1.1e-09 67.4 79 44.3
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 1.1e-09 67.4 100 45.0
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 1.4e-09 67.0 83 44.6
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 1.4e-09 67.0 85 43.5
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 1.8e-09 66.6 76 47.4
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 1.8e-09 66.6 76 47.4
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 1.8e-09 66.6 57 52.6
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-09 66.2 89 39.3
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 2.4e-09 66.2 89 39.3
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.4e-09 66.2 102 39.2
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 2.4e-09 66.2 79 41.8
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 3.1e-09 65.9 75 49.3
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 3.1e-09 65.9 105 39.0
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 4.1e-09 65.5 56 55.4
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 4.1e-09 65.5 88 40.9
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 4.1e-09 65.5 79 45.6
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 5.3e-09 65.1 95 38.9
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 5.3e-09 65.1 95 38.9
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 5.3e-09 65.1 60 51.7
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 7.0e-09 64.7 89 38.2
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 7.0e-09 64.7 89 38.2
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 7.0e-09 64.7 96 38.5
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 9.1e-09 64.3 60 53.3
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.2e-08 63.9 60 50.0
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 1.2e-08 63.9 80 43.8
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 1.6e-08 63.5 54 53.7
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 2.0e-08 63.2 95 38.9
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 2.0e-08 63.2 48 60.4
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 2.0e-08 63.2 72 45.8
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 2.0e-08 63.2 88 38.6
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 2.7e-08 62.8 83 38.6
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 3.5e-08 62.4 75 44.0
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 3.5e-08 62.4 74 43.2
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 4.5e-08 62.0 57 52.6
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 5.9e-08 61.6 85 44.7
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 7.7e-08 61.2 90 38.9
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 7.7e-08 61.2 45 60.0
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 7.7e-08 61.2 67 44.8
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 7.7e-08 61.2 75 42.7
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 1.0e-07 60.8 89 36.0
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 1.0e-07 60.8 70 45.7
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.0e-07 60.8 54 51.9
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 1.0e-07 60.8 77 41.6
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.3e-07 60.5 73 46.6
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.3e-07 60.5 73 46.6
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 1.7e-07 60.1 51 56.9
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.7e-07 60.1 54 51.9
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.7e-07 60.1 99 35.4
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 2.2e-07 59.7 53 56.6
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.2e-07 59.7 99 34.3
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 2.2e-07 59.7 55 49.1
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.9e-07 59.3 51 58.8
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 2.9e-07 59.3 64 48.4
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 2.9e-07 59.3 64 45.3
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 2.9e-07 59.3 51 52.9
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.9e-07 59.3 101 33.7
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 2.9e-07 59.3 60 48.3
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 2.9e-07 59.3 89 37.1
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 3.8e-07 58.9 111 33.3
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 3.8e-07 58.9 52 51.9
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 3.8e-07 58.9 76 38.2
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 3.8e-07 58.9 115 33.9
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 5.0e-07 58.5 42 66.7
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 5.0e-07 58.5 42 66.7
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 5.0e-07 58.5 42 66.7
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 5.0e-07 58.5 51 58.8
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 6.5e-07 58.2 73 45.2
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 6.5e-07 58.2 51 52.9
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 6.5e-07 58.2 83 37.3
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 6.5e-07 58.2 54 50.0
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.1e-06 57.4 51 51.0
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 1.5e-06 57.0 51 56.9
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 1.5e-06 57.0 79 43.0
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 1.5e-06 57.0 81 35.8
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.5e-06 56.2 53 47.2
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 9.4e-06 54.3 53 45.3
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 9.4e-06 54.3 61 44.3


User provided reference genes

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