Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0086 Marchantia polymorpha HOM05D005866 ORTHO05D007078 1.2e-153 546.6 294 100.0
Pp3c5_19930 Physcomitrium patens HOM05D005866 ORTHO05D007078 1.3e-48 197.6 207 54.1
AagrBONN_evm.TU.Sc2ySwM_117.2545 Anthoceros agrestis HOM05D005866 ORTHO05D007078 3.3e-47 193.0 210 51.9
SMO143G0029 Selaginella moellendorffii HOM05D001879 ORTHO05D007648 2.1e-33 147.1 210 42.9
SEGI_33363 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 9.7e-31 138.3 210 40.0
Pp3c20_9600 Physcomitrium patens HOM05D005866 ORTHO05D007078 2.1e-25 120.6 225 36.4
TPR.G1580 Trifolium pratense HOM05D005866 ORTHO05D007078 1.4e-24 117.9 211 36.0
Psat3g131120 Pisum sativum HOM05D005866 ORTHO05D007078 1.8e-24 117.5 200 35.5
Potri.006G096700 Populus trichocarpa HOM05D005866 ORTHO05D007078 2.3e-24 117.1 216 33.3
Pp3c23_6870 Physcomitrium patens HOM05D005866 ORTHO05D007078 3.0e-24 116.7 228 37.3
Aa31LG3G1580 Aethionema arabicum HOM05D005866 ORTHO05D007078 3.9e-24 116.3 204 36.3
Glyma.07G145800 Glycine max HOM05D005866 ORTHO05D007078 3.9e-24 116.3 221 33.5
BraA01t04319Z Brassica rapa HOM05D005866 ORTHO05D007078 5.1e-24 115.9 214 36.4
Mapoly0010s0127 Marchantia polymorpha HOM05D005866 ORTHO05D007078 6.7e-24 115.5 232 38.4
SEGI_17473 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 6.7e-24 115.5 187 39.6
Ca_07614_v3 Cicer arietinum L. HOM05D005866 ORTHO05D007078 1.5e-23 114.4 211 34.1
FAN14G3518 Fragaria x ananassa HOM05D005866 ORTHO05D007078 4.4e-23 112.8 218 35.3
Lj1g0011685 Lotus japonicus HOM05D005866 ORTHO05D007078 2.2e-22 110.5 209 34.0
Medtr7g067000 Medicago truncatula HOM05D005866 ORTHO05D007078 2.2e-22 110.5 211 34.6
Phvul.008G107300 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 2.8e-22 110.2 232 33.2
Aqoxy1G00701 Aquilegia oxysepala HOM05D005866 ORTHO05D007078 1.1e-21 108.2 216 35.2
VMungo1383G0141 Vigna mungo HOM05D005866 ORTHO05D007078 1.4e-21 107.8 253 32.0
arahy.Tifrunner.gnm1.ann1.LP8IIZ Arachis hypogaea HOM05D005866 ORTHO05D007078 1.8e-21 107.5 210 34.8
FAN09G2814 Fragaria x ananassa HOM05D000012 ORTHO05D007078 4.1e-21 106.3 223 33.6
Glyma.18G197300 Glycine max HOM05D005866 ORTHO05D007078 4.1e-21 106.3 217 31.3
arahy.Tifrunner.gnm1.ann1.Q1H550 Arachis hypogaea HOM05D005866 ORTHO05D007078 5.3e-21 105.9 210 35.2
ECA247G0127 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.5e-20 104.4 205 30.2
AUR62042946 Chenopodium quinoa HOM05D005866 ORTHO05D007078 2.0e-20 104.0 228 29.8
Lj2C80T14 Lonicera japonica HOM05D005866 ORTHO05D007078 2.6e-20 103.6 205 32.2
MD04G1147400 Malus domestica HOM05D005866 ORTHO05D007078 4.5e-20 102.8 269 27.5
Gohir.D01G215200 Gossypium hirsutum HOM05D005866 ORTHO05D007078 1.7e-19 100.9 206 31.6
Atru.chr8.2203 Acer truncatum HOM05D005866 ORTHO05D007078 2.2e-19 100.5 205 34.6
CsaV3_4G026010 Cucumis sativus L. HOM05D005866 ORTHO05D007078 2.2e-19 100.5 246 29.7
SEGI_22580 Sequoiadendron giganteum HOM05D005866 ORTHO05D007078 5.0e-19 99.4 225 32.0
FvH4_6g11980 Fragaria vesca HOM05D005866 ORTHO05D007078 1.1e-18 98.2 217 33.2
FAN14G3397 Fragaria x ananassa HOM05D000012 ORTHO05D000567 1.1e-18 98.2 217 33.2
FAN02G1355 Fragaria x ananassa HOM05D005866 ORTHO05D007078 1.4e-18 97.8 206 34.0
BcaC09g48006 Brassica carinata HOM05D005866 ORTHO05D007078 4.2e-18 96.3 229 34.1
Lj3g0009346 Lotus japonicus HOM05D005866 ORTHO05D007078 5.5e-18 95.9 211 30.8
Lalb_Chr07g0193301 Lupinus albus HOM05D005866 ORTHO05D007078 1.6e-17 94.4 207 31.9
CSS0007949 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 2.1e-17 94.0 204 30.4
CSS0025068 Camellia sinensis var. sinensis HOM05D005866 ORTHO05D007078 2.1e-17 94.0 204 30.4
BcaC09g48050 Brassica carinata HOM05D005866 ORTHO05D007078 2.7e-17 93.6 228 33.8
CiPaw.09G206400 Carya illinoinensis HOM05D005866 ORTHO05D007078 3.6e-17 93.2 209 29.7
AUR62025814 Chenopodium quinoa HOM05D005866 ORTHO05D007078 3.6e-17 93.2 212 29.7
arahy.Tifrunner.gnm1.ann1.QNAF0W Arachis hypogaea HOM05D005866 ORTHO05D007078 4.7e-17 92.8 209 32.5
AT3G09050 Arabidopsis thaliana HOM05D005866 ORTHO05D007078 1.4e-16 91.3 208 31.7
BcaC09g48005 Brassica carinata HOM05D005866 ORTHO05D007078 1.4e-16 91.3 229 32.8
BolC1t05477H Brassica oleracea HOM05D005866 ORTHO05D007078 1.8e-16 90.9 232 33.6
arahy.Tifrunner.gnm1.ann1.6JA19R Arachis hypogaea HOM05D005866 ORTHO05D007078 3.0e-16 90.1 164 36.0
AL3G20110 Arabidopsis lyrata HOM05D005866 ORTHO05D007078 3.9e-16 89.7 195 32.3
Dinv35509 Davidia involucrata HOM05D005866 ORTHO05D007078 3.9e-16 89.7 216 28.7
Sp3g07500 Schrenkiella parvula HOM05D005866 ORTHO05D007078 3.9e-16 89.7 204 32.4
Carub.0003s0821 Capsella rubella HOM05D005866 ORTHO05D007078 5.2e-16 89.4 209 32.5
Psat7g247600 Pisum sativum HOM05D005866 ORTHO05D007078 5.2e-16 89.4 253 30.0
CDE03G0505 Ceratophyllum demersum HOM05D005866 ORTHO05D007078 6.7e-16 89.0 210 31.4
Dinv14530 Davidia involucrata HOM05D005866 ORTHO05D007078 8.8e-16 88.6 216 28.2
Thhalv10021354m.g Eutrema salsugineum HOM05D005866 ORTHO05D007078 1.5e-15 87.8 224 30.8
Zm00001eb367320 Zea mays HOM05D005866 ORTHO05D007078 2.0e-15 87.4 249 31.3
CARHR083410 Cardamine hirsuta HOM05D005866 ORTHO05D007078 3.3e-15 86.7 205 31.7
BcaC05g29639 Brassica carinata HOM05D005866 ORTHO05D007078 4.4e-15 86.3 250 29.2
Prupe.6G271100 Prunus persica HOM05D000012 ORTHO05D000567 5.7e-15 85.9 212 28.3
MELO3C003227.2 Cucumis melo HOM05D005866 ORTHO05D007078 7.4e-15 85.5 198 30.8
vmacro08602 Vaccinium macrocarpon HOM05D005866 ORTHO05D007078 7.4e-15 85.5 205 30.7
BolC5t34535H Brassica oleracea HOM05D005866 ORTHO05D007078 9.7e-15 85.1 209 32.1
ClCG04G007220 Citrullus lanatus HOM05D005866 ORTHO05D007078 9.7e-15 85.1 211 29.4
ECA247G1841 Erigeron canadensis HOM05D005866 ORTHO05D007078 1.3e-14 84.7 160 30.6
Nn2g11373 Nelumbo nucifera HOM05D005866 ORTHO05D007078 1.3e-14 84.7 233 29.2
TWI74G1551 Tripterygium wilfordii HOM05D005866 ORTHO05D007078 1.3e-14 84.7 205 30.2
Hund02698 Selenicereus undatus HOM05D005866 ORTHO05D007078 2.2e-14 84.0 238 27.7
A05p39790 Brassica napus HOM05D005866 ORTHO05D007078 2.8e-14 83.6 210 31.0
BraA05t22763Z Brassica rapa HOM05D005866 ORTHO05D007078 2.8e-14 83.6 210 31.0
Os01g0853000 Oryza sativa ssp. japonica HOM05D005866 ORTHO05D007078 3.7e-14 83.2 227 33.5
C05p58830 Brassica napus HOM05D005866 ORTHO05D007078 4.8e-14 82.8 209 31.6
Lsat_1_v5_gn_9_36061 Lactuca sativa HOM05D005866 ORTHO05D007078 6.3e-14 82.4 253 27.3
Thecc.05G021700 Theobroma cacao HOM05D005866 ORTHO05D007078 1.4e-13 81.3 217 30.0
TAR623G0986 Trochodendron aralioides HOM05D005866 ORTHO05D007078 1.8e-13 80.9 217 28.1
FAN05G0379 Fragaria x ananassa HOM05D000012 ORTHO05D000567 2.4e-13 80.5 217 30.4
Sabra06G0074300 Salix brachista HOM05D005866 ORTHO05D007078 4.1e-13 79.7 216 27.3
unitig_578.g15896 Utricularia gibba HOM05D005866 ORTHO05D007078 5.3e-13 79.3 206 28.2
Nitab4.5_0004912g0060 Nicotiana tabacum HOM05D005866 ORTHO05D007078 1.6e-12 77.8 227 30.8
GSVIVG01034004001 Vitis vinifera HOM05D000012 ORTHO05D000567 1.6e-12 77.8 215 28.4
SGA_v2.0_scaffold85G26760 Striga asiatica HOM05D005866 ORTHO05D007078 2.6e-12 77.0 141 38.3
Eucgr.B02792 Eucalyptus grandis HOM05D005866 ORTHO05D007078 3.5e-12 76.6 205 30.2
Haze_20956 Corylus avellana HOM05D005866 ORTHO05D007078 5.9e-12 75.9 216 26.4
Sed0005881 Sechium edule HOM05D005866 ORTHO05D007078 5.9e-12 75.9 245 26.1
Duzib128G1899 Durio zibethinus HOM05D005866 ORTHO05D007078 1.7e-11 74.3 219 28.3
RcHm_v2.0_Chr3g0463811 Rosa chinensis HOM05D005866 ORTHO05D007078 2.2e-11 73.9 144 36.8
DCAR_015452 Daucus carota HOM05D005866 ORTHO05D007078 5.0e-11 72.8 202 29.7
Cpa.g.sc56.117 Carica papaya HOM05D005866 ORTHO05D007078 6.5e-11 72.4 195 30.8
Sopen10g034540 Solanum pennellii HOM05D005866 ORTHO05D007078 6.5e-11 72.4 221 29.9
PGSC0003DMG400011090 Solanum tuberosum HOM05D005866 ORTHO05D007078 1.1e-10 71.6 225 29.8
CAN.G1297.4 Capsicum annuum HOM05D005866 ORTHO05D007078 1.5e-10 71.2 211 28.4
PSO384G0902 Papaver somniferum HOM05D005866 ORTHO05D007078 1.5e-10 71.2 217 28.6
PGR031G2542 Punica granatum HOM05D005866 ORTHO05D007078 1.5e-10 71.2 216 27.3
Gohir.A01G225500 Gossypium hirsutum HOM05D005866 ORTHO05D007078 3.2e-10 70.1 206 28.2
Sc01g0006840 Simmondsia chinensis HOM05D005866 ORTHO05D007078 4.2e-10 69.7 212 27.4
TAR633G2503 Trochodendron aralioides HOM05D005866 ORTHO05D007078 4.2e-10 69.7 136 34.6
arahy.Tifrunner.gnm1.ann1.T33YJ3 Arachis hypogaea HOM05D005866 ORTHO05D007078 7.2e-10 68.9 217 24.4
Nitab4.5_0000652g0170 Nicotiana tabacum HOM05D005866 ORTHO05D007078 7.2e-10 68.9 208 30.3
COL.COLO4_14593 Corchorus olitorius HOM05D005866 ORTHO05D007078 9.4e-10 68.6 205 29.3
Peaxi162Scf00141g00718 Petunia axillaris HOM05D005866 ORTHO05D007078 9.4e-10 68.6 205 27.8
arahy.Tifrunner.gnm1.ann1.F83RTD Arachis hypogaea HOM05D005866 ORTHO05D007078 1.6e-09 67.8 217 24.4
Lj2P1203T18 Lonicera japonica HOM05D005866 ORTHO05D007078 1.6e-09 67.8 143 32.9
Phvul.010G008600 Phaseolus vulgaris HOM05D005866 ORTHO05D007078 3.6e-09 66.6 216 26.4
ATR0618G104 Amborella trichopoda HOM05D005866 ORTHO05D007078 6.1e-09 65.9 128 34.4
EL10Ac6g13875 Beta vulgaris HOM05D005866 ORTHO05D007078 6.1e-09 65.9 199 31.2
Manes.09G102400 Manihot esculenta HOM05D005866 ORTHO05D007078 1.0e-08 65.1 204 26.0
THA.LOC104816219 Tarenaya hassleriana HOM05D005866 ORTHO05D007078 1.8e-08 64.3 224 26.8
VMungo0331G1214 Vigna mungo HOM05D005866 ORTHO05D007078 2.3e-08 63.9 215 25.6
MSTRG.5595 Avicennia marina HOM05D005866 ORTHO05D007078 5.2e-08 62.8 206 26.7
CANSAT35G0638 Cannabis sativa HOM05D005866 ORTHO05D007078 5.2e-08 62.8 214 28.0
PSO339G5866 Papaver somniferum HOM05D005866 ORTHO05D007078 5.2e-08 62.8 113 38.1
Ah.12g060060 Amaranthus hybridus HOM05D005866 ORTHO05D007078 6.7e-08 62.4 216 23.1
Medtr4g015010 Medicago truncatula HOM05D005866 ORTHO05D007078 3.3e-07 60.1 213 27.7
Sopen09g007090 Solanum pennellii HOM05D005866 ORTHO05D007078 3.3e-07 60.1 205 25.9
TPR.G5230 Trifolium pratense HOM05D005866 ORTHO05D007078 5.7e-07 59.3 215 27.0
Cc06_g01630 Coffea canephora HOM05D005866 ORTHO05D007078 7.5e-07 58.9 204 24.5
Migut.J00221 Erythranthe guttata HOM05D005866 ORTHO05D007078 2.2e-06 57.4 205 26.8
Solyc10g085080.3 Solanum lycopersicum HOM05D005866 ORTHO05D007078 2.2e-06 57.4 237 26.6
Gorai.002G261300 Gossypium raimondii HOM05D005866 ORTHO05D007078 6.3e-06 55.8 206 25.7


User provided reference genes

Program Settings