Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 7.8e-106 387.1 192 100.0
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 3.0e-33 146.0 105 61.0
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.2e-32 144.1 142 52.1
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 1.5e-32 143.7 179 45.3
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 2.6e-32 142.9 105 62.9
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 2.6e-32 142.9 122 55.7
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 2.6e-32 142.9 136 50.7
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 5.7e-32 141.7 142 51.4
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 7.5e-32 141.4 105 60.0
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 9.7e-32 141.0 105 57.1
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 1.7e-31 140.2 105 60.0
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 2.2e-31 139.8 99 62.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 2.2e-31 139.8 101 61.4
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 2.2e-31 139.8 105 60.0
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 2.2e-31 139.8 102 60.8
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.8e-31 139.4 105 59.0
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 2.8e-31 139.4 105 57.1
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 2.8e-31 139.4 146 49.3
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 2.8e-31 139.4 102 60.8
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 3.7e-31 139.0 150 48.0
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 3.7e-31 139.0 137 53.3
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 3.7e-31 139.0 114 57.9
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 3.7e-31 139.0 94 63.8
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 4.8e-31 138.7 136 52.9
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 6.3e-31 138.3 121 52.9
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 6.3e-31 138.3 142 50.0
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 6.3e-31 138.3 149 47.0
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 8.2e-31 137.9 105 59.0
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 8.2e-31 137.9 113 55.8
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 1.1e-30 137.5 150 48.0
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 1.4e-30 137.1 162 44.4
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 1.4e-30 137.1 105 57.1
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 1.8e-30 136.7 144 46.5
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 1.8e-30 136.7 102 57.8
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 1.8e-30 136.7 105 57.1
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 1.8e-30 136.7 114 56.1
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 1.8e-30 136.7 105 59.0
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.8e-30 136.7 135 50.4
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 2.4e-30 136.3 105 59.0
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 2.4e-30 136.3 105 57.1
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 2.4e-30 136.3 105 59.0
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.4e-30 136.3 118 55.9
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 3.1e-30 136.0 138 48.6
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 3.1e-30 136.0 118 53.4
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 3.1e-30 136.0 138 48.6
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 3.1e-30 136.0 138 48.6
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.1e-30 136.0 105 59.0
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 3.1e-30 136.0 105 59.0
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 3.1e-30 136.0 105 57.1
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 4.1e-30 135.6 109 56.9
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 4.1e-30 135.6 109 56.9
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 4.1e-30 135.6 99 58.6
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 4.1e-30 135.6 105 56.2
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 4.1e-30 135.6 105 59.0
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 5.3e-30 135.2 105 59.0
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 7.0e-30 134.8 105 58.1
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 7.0e-30 134.8 110 56.4
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 9.1e-30 134.4 105 58.1
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 9.1e-30 134.4 105 58.1
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 9.1e-30 134.4 119 52.1
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 1.2e-29 134.0 100 57.0
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 1.2e-29 134.0 118 55.1
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 1.2e-29 134.0 105 57.1
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.6e-29 133.7 105 57.1
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 1.6e-29 133.7 102 59.8
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 1.6e-29 133.7 139 47.5
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 2.0e-29 133.3 105 58.1
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 2.0e-29 133.3 121 53.7
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 3.5e-29 132.5 139 48.9
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.5e-29 132.5 105 56.2
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 7.7e-29 131.3 105 55.2
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 7.7e-29 131.3 191 41.9
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 1.0e-28 131.0 133 49.6
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.7e-28 130.2 103 54.4
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.7e-28 130.2 105 57.1
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 2.2e-28 129.8 114 50.9
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 6.5e-28 128.3 106 53.8
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 6.5e-28 128.3 134 50.7
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 1.5e-27 127.1 105 54.3
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 2.5e-27 126.3 134 47.8
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 3.6e-26 122.5 145 43.4
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 4.0e-25 119.0 105 52.4
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 5.2e-25 118.6 100 52.0
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 6.8e-25 118.2 89 62.9
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 7.5e-24 114.8 90 55.6
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 1.4e-22 110.5 135 44.4
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 4.1e-22 109.0 119 50.4
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 9.1e-22 107.8 96 50.0
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 2.7e-21 106.3 99 51.5
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 4.5e-21 105.5 103 52.4
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.5e-21 105.5 76 61.8
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 4.5e-21 105.5 76 61.8
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 4.5e-21 105.5 87 56.3
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 1.2e-18 97.4 76 53.9
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 3.6e-18 95.9 124 41.1
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 2.8e-15 86.3 76 50.0
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 2.8e-15 86.3 75 56.0
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.1e-14 84.3 73 52.1
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 7.0e-14 81.6 76 48.7
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.0e-12 77.8 118 36.4
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 2.1e-10 70.1 144 36.8
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 4.0e-09 65.9 60 50.0


User provided reference genes

Program Settings