Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 6.1e-186 654.1 340 100.0
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 5.5e-86 322.0 259 63.7
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 2.7e-85 319.7 252 62.7
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 6.0e-85 318.5 196 75.0
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 7.9e-85 318.2 232 65.9
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.3e-84 317.4 266 58.3
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.3e-84 317.4 193 75.1
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 5.1e-84 315.5 273 58.6
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 6.7e-84 315.1 194 74.2
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.9e-83 313.5 229 64.6
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.3e-83 312.8 193 73.1
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 3.3e-83 312.8 193 74.1
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 5.7e-83 312.0 272 59.9
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 7.4e-83 311.6 244 61.1
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 7.4e-83 311.6 193 73.6
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 7.4e-83 311.6 193 74.6
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 9.6e-83 311.2 193 74.1
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 9.6e-83 311.2 221 69.2
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.3e-82 310.8 190 73.7
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.6e-82 310.5 215 69.3
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.6e-82 310.5 193 74.6
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 1.6e-82 310.5 195 71.8
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 3.7e-82 309.3 258 60.5
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 4.8e-82 308.9 196 71.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 6.2e-82 308.5 194 72.7
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 6.2e-82 308.5 205 70.7
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 8.2e-82 308.1 227 65.2
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.1e-81 307.8 273 57.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.1e-81 307.8 273 57.9
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.4e-81 307.4 192 74.0
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.4e-81 307.4 192 74.0
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 1.4e-81 307.4 194 71.6
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.4e-81 307.4 210 68.1
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 1.8e-81 307.0 252 62.3
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 2.4e-81 306.6 199 70.4
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.4e-81 306.6 240 62.5
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.4e-81 306.6 196 72.4
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.1e-81 306.2 204 68.6
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 3.1e-81 306.2 192 74.5
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 5.3e-81 305.4 205 69.8
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 5.3e-81 305.4 290 56.6
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 6.9e-81 305.1 204 68.6
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 6.9e-81 305.1 245 62.4
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 9.0e-81 304.7 211 67.3
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 9.0e-81 304.7 196 71.4
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 9.0e-81 304.7 196 71.4
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 1.2e-80 304.3 270 58.1
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 1.5e-80 303.9 205 68.8
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 2.0e-80 303.5 192 72.9
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 2.0e-80 303.5 194 71.1
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.6e-80 303.1 197 72.6
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 4.5e-80 302.4 211 67.3
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 4.5e-80 302.4 194 71.6
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 4.5e-80 302.4 194 71.6
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 5.8e-80 302.0 193 72.0
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 5.8e-80 302.0 201 71.1
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 7.6e-80 301.6 291 55.3
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.0e-79 301.2 240 62.5
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.7e-79 300.4 194 70.6
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.7e-79 300.4 252 61.1
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 2.9e-79 299.7 192 72.4
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 3.8e-79 299.3 194 68.0
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 5.0e-79 298.9 256 58.2
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 6.5e-79 298.5 187 71.7
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.4e-78 297.4 194 71.6
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.4e-78 297.4 194 71.6
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.4e-78 297.4 212 66.5
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 1.9e-78 297.0 280 53.9
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.5e-78 296.6 225 64.9
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 4.2e-78 295.8 256 57.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 4.2e-78 295.8 256 57.8
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 9.3e-78 294.7 197 70.6
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.2e-77 294.3 248 58.1
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.6e-77 293.9 267 57.7
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 1.6e-77 293.9 195 67.7
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 2.1e-77 293.5 185 73.0
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 6.1e-77 292.0 277 57.0
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 7.9e-77 291.6 193 70.5
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 1.3e-76 290.8 193 68.9
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 6.7e-76 288.5 193 66.3
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 9.7e-75 284.6 198 67.2
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 1.8e-73 280.4 225 59.6
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 6.9e-73 278.5 251 57.0
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.5e-72 277.3 208 66.3
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.9e-71 273.1 239 56.5
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.5e-70 270.0 205 63.4
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-68 264.2 189 67.2
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 6.7e-68 261.9 167 71.3
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.5e-67 260.8 174 68.4
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 5.7e-67 258.8 254 53.1
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.2e-66 256.9 166 69.9
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 9.1e-65 251.5 254 52.0
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 1.7e-63 247.3 161 67.7
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.9e-63 246.5 274 47.8
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 6.1e-61 238.8 245 53.5
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 3.0e-60 236.5 174 66.7
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.8e-58 229.2 144 74.3
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 2.2e-47 193.7 120 73.3
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.2e-47 193.7 123 74.8
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.7e-45 186.8 121 68.6
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.0e-44 183.3 204 52.0
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 3.0e-44 183.3 144 62.5
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 2.2e-39 167.2 201 47.8
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 5.2e-36 156.0 254 40.9
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.5e-35 154.5 100 71.0
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 5.7e-35 152.5 218 45.4
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 1.7e-34 151.0 102 70.6
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.5e-32 143.3 159 52.2
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 8.6e-31 138.7 92 67.4
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 7.5e-27 125.6 72 72.2
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.2e-26 124.0 95 62.1
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.1e-25 119.8 78 67.9
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 2.5e-22 110.5 70 71.4
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.7e-10 71.2 95 41.1


User provided reference genes

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