Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 4.9e-131 471.1 230 100.0
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 1.8e-61 240.0 224 49.1
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 8.6e-59 231.1 218 47.2
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 4.7e-57 225.3 213 46.9
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 6.1e-57 224.9 218 45.9
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 2.3e-56 223.0 224 46.4
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.2e-55 220.7 218 45.0
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 1.5e-55 220.3 218 47.2
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 1.5e-55 220.3 215 45.6
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 2.0e-55 219.9 215 44.7
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 2.0e-55 219.9 209 47.8
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.0e-55 219.9 209 46.9
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 2.6e-55 219.5 228 43.9
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.4e-55 219.2 214 45.3
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 3.4e-55 219.2 215 46.0
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 3.4e-55 219.2 219 44.7
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 4.4e-55 218.8 217 44.2
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 5.8e-55 218.4 219 44.3
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.8e-55 218.4 217 44.2
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 5.8e-55 218.4 213 46.9
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 7.5e-55 218.0 221 44.3
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 9.8e-55 217.6 219 45.2
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 9.8e-55 217.6 217 44.2
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 1.3e-54 217.2 211 47.9
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 1.7e-54 216.9 217 46.5
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 4.9e-54 215.3 218 45.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.1e-53 214.2 223 45.3
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 1.1e-53 214.2 210 45.2
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 1.1e-53 214.2 215 46.0
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 1.1e-53 214.2 213 44.1
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 1.9e-53 213.4 219 43.4
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 1.9e-53 213.4 221 43.4
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 2.4e-53 213.0 218 45.9
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 3.2e-53 212.6 210 46.7
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 3.2e-53 212.6 215 43.7
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 5.4e-53 211.8 213 46.9
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 9.2e-53 211.1 218 43.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 9.2e-53 211.1 208 47.1
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.2e-52 210.7 213 44.1
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 1.6e-52 210.3 218 44.5
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.0e-52 209.9 208 44.2
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 2.7e-52 209.5 221 43.0
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 2.7e-52 209.5 219 45.2
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.5e-52 209.1 221 43.4
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 3.5e-52 209.1 224 44.2
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 4.6e-52 208.8 217 43.3
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 4.6e-52 208.8 221 41.6
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 4.6e-52 208.8 217 42.4
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 6.0e-52 208.4 222 41.9
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 6.0e-52 208.4 221 42.5
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 6.0e-52 208.4 218 45.0
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 6.0e-52 208.4 221 43.4
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 6.0e-52 208.4 218 44.0
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.0e-51 207.6 218 41.3
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.0e-51 207.6 216 44.0
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 1.3e-51 207.2 215 42.3
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 1.3e-51 207.2 215 43.7
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 1.3e-51 207.2 218 44.0
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 1.7e-51 206.8 221 43.4
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 2.3e-51 206.5 218 44.5
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 2.3e-51 206.5 211 43.6
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 3.0e-51 206.1 215 43.3
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 3.9e-51 205.7 212 42.9
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.9e-51 205.7 221 43.0
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 3.9e-51 205.7 212 42.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 5.0e-51 205.3 224 43.3
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 6.6e-51 204.9 215 41.4
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 6.6e-51 204.9 201 45.8
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 8.6e-51 204.5 218 40.4
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 8.6e-51 204.5 218 40.4
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 8.6e-51 204.5 218 40.4
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 8.6e-51 204.5 215 41.4
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 8.6e-51 204.5 217 43.8
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 1.5e-50 203.8 218 40.4
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 1.5e-50 203.8 221 43.0
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 1.9e-50 203.4 209 44.0
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.9e-50 203.4 215 41.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.9e-50 203.4 218 43.6
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 2.5e-50 203.0 215 41.9
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 4.3e-50 202.2 215 41.4
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 5.6e-50 201.8 219 42.5
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 5.6e-50 201.8 211 42.2
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 5.6e-50 201.8 213 43.7
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 9.5e-50 201.1 221 43.0
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.2e-49 200.7 213 41.8
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.1e-49 199.9 213 44.6
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 2.0e-47 193.4 274 36.5
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 3.4e-47 192.6 209 40.2
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 4.4e-47 192.2 217 41.0
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 5.8e-47 191.8 207 44.0
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 7.5e-47 191.4 218 42.7
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 1.3e-46 190.7 219 42.0
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 1.3e-46 190.7 185 45.4
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 6.4e-46 188.3 219 42.0
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 5.4e-45 185.3 216 41.2
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 2.1e-44 183.3 218 37.2
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 4.6e-44 182.2 241 37.3
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.3e-43 179.9 181 45.9
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 5.1e-43 178.7 210 40.5
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 6.6e-43 178.3 173 45.7
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 1.1e-42 177.6 182 45.6
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 8.9e-40 167.9 173 42.8
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 7.5e-39 164.9 179 43.6
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 3.0e-35 152.9 209 36.4
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 3.9e-35 152.5 215 34.9
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 8.6e-35 151.4 217 33.6
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 7.3e-34 148.3 209 36.8
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 2.1e-33 146.7 214 33.2
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 8.1e-33 144.8 150 42.0
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.2e-31 141.0 210 34.3
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 2.2e-30 136.7 156 37.2
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 4.9e-30 135.6 175 36.0
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 8.4e-30 134.8 215 32.6
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 1.6e-28 130.6 150 38.7
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 5.1e-27 125.6 225 30.2
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 5.1e-27 125.6 137 39.4
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 2.9e-22 109.8 163 31.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 3.8e-22 109.4 224 29.9
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 2.4e-21 106.7 113 43.4
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 3.8e-14 82.8 107 35.5
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.4e-13 80.1 92 40.2
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 5.4e-13 79.0 78 38.5
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 1.3e-06 57.8 63 44.4


User provided reference genes

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