Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 1.7e-90 335.9 155 100.0
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.3e-84 315.5 155 94.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 3.3e-62 241.9 141 73.0
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 8.3e-58 227.3 144 69.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 7.1e-57 224.2 136 69.1
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.6e-56 223.0 143 65.7
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 2.7e-56 222.2 143 65.7
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 3.0e-55 218.8 154 63.0
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 3.9e-55 218.4 155 61.3
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.5e-54 216.5 142 64.8
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.5e-54 215.7 154 61.7
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.3e-54 214.9 152 61.8
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.3e-54 214.9 142 64.1
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 5.6e-54 214.5 142 62.7
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 7.3e-54 214.2 142 64.1
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 7.3e-54 214.2 138 65.2
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 9.5e-54 213.8 142 64.1
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 2.1e-53 212.6 142 62.0
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 2.1e-53 212.6 142 63.4
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 2.1e-53 212.6 142 64.1
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 2.8e-53 212.2 136 66.9
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 2.8e-53 212.2 136 64.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 3.6e-53 211.8 143 62.2
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 3.6e-53 211.8 152 61.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.6e-53 211.8 142 62.7
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 3.6e-53 211.8 142 64.8
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 3.6e-53 211.8 142 62.7
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.6e-53 211.8 142 62.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 4.7e-53 211.5 139 62.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 4.7e-53 211.5 152 61.2
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 4.7e-53 211.5 142 62.7
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.2e-53 211.1 142 61.3
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 6.2e-53 211.1 142 62.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 8.1e-53 210.7 148 60.1
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 1.1e-52 210.3 136 64.0
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-52 210.3 141 63.1
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.1e-52 210.3 142 62.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.1e-52 210.3 142 62.0
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.1e-52 210.3 142 62.0
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.1e-52 210.3 142 62.7
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.4e-52 209.9 141 62.4
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.8e-52 209.5 141 62.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.8e-52 209.5 142 61.3
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.4e-52 209.1 141 61.7
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.4e-52 209.1 154 58.4
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.4e-52 209.1 139 64.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.4e-52 209.1 154 59.7
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.4e-52 209.1 141 62.4
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.1e-52 208.8 142 60.6
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 3.1e-52 208.8 142 61.3
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 3.1e-52 208.8 142 60.6
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 4.0e-52 208.4 141 62.4
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 60.6
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 60.6
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 60.6
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 60.6
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 63.4
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.0e-52 208.4 142 63.4
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.2e-52 208.0 142 59.9
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 6.8e-52 207.6 142 61.3
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 8.9e-52 207.2 141 61.0
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.9e-52 207.2 137 62.8
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 8.9e-52 207.2 142 61.3
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 8.9e-52 207.2 137 66.4
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.2e-51 206.8 141 61.7
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.2e-51 206.8 142 61.3
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.2e-51 206.8 142 61.3
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.5e-51 206.5 142 62.7
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 2.0e-51 206.1 143 60.1
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.6e-51 205.7 140 64.3
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.6e-51 205.7 134 64.9
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.6e-51 205.7 142 61.3
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.4e-51 205.3 140 60.0
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 4.4e-51 204.9 137 61.3
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.8e-51 204.5 134 64.2
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 5.8e-51 204.5 143 62.2
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 5.8e-51 204.5 140 59.3
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 5.8e-51 204.5 140 60.0
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 7.6e-51 204.1 140 62.1
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 9.9e-51 203.8 142 59.2
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 9.9e-51 203.8 142 61.3
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 9.9e-51 203.8 154 57.8
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.3e-50 203.4 142 59.2
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.3e-50 203.4 142 61.3
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.7e-50 203.0 149 59.7
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.7e-50 203.0 149 59.7
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.7e-50 203.0 143 58.0
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.9e-50 202.2 142 59.2
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.9e-50 202.2 142 59.2
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 3.8e-50 201.8 142 59.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 6.4e-50 201.1 142 58.5
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 8.4e-50 200.7 135 62.2
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.1e-49 200.3 142 59.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.4e-49 199.9 142 58.5
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.4e-49 198.0 142 60.6
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 2.1e-48 196.1 142 59.9
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 1.5e-46 189.9 125 64.0
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 2.8e-45 185.7 195 45.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 6.2e-45 184.5 140 59.3
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.4e-44 182.6 141 57.4
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 2.4e-44 182.6 126 61.1
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 5.3e-44 181.4 140 58.6
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.4e-43 178.3 117 64.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.7e-42 176.4 123 61.8
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.2e-42 176.0 123 59.3
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 3.8e-42 175.3 136 56.6
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 8.4e-42 174.1 131 63.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 4.2e-41 171.8 121 57.9
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 9.3e-41 170.6 102 68.6
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 3.5e-40 168.7 116 59.5
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-39 166.8 102 67.6
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 9.6e-38 160.6 96 67.7
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.1e-37 159.5 104 65.4
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.8e-36 156.4 102 62.7
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 9.0e-36 154.1 126 55.6
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.5e-35 153.3 95 67.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 2.6e-35 152.5 98 61.2
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.3e-31 139.4 171 39.8
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 6.2e-29 131.3 142 43.7
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.9e-26 121.7 89 56.2
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 2.7e-24 115.9 141 44.7
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 4.8e-21 105.1 75 57.3
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 2.0e-19 99.8 68 61.8
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.4e-19 99.0 73 57.5
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 1.3e-18 97.1 67 59.7
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 7.4e-14 81.3 52 61.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 2.6e-11 72.8 53 60.4


User provided reference genes

Program Settings