Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0193 Marchantia polymorpha HOM05D000897 ORTHO05D000716 2.1e-188 662.1 327 100.0
Cfa024545 Carpinus fangiana HOM05D000897 ORTHO05D000716 2.5e-27 127.1 283 31.8
SMO353G0299 Selaginella moellendorffii HOM05D000897 ORTHO05D000716 3.3e-11 73.6 295 27.5
SMO200G0245 Selaginella moellendorffii HOM05D000897 ORTHO05D000716 7.2e-11 72.4 290 25.9
THA.LOC104820533 Tarenaya hassleriana HOM05D000897 ORTHO05D000716 7.2e-11 72.4 302 27.5
Os07g0687900 Oryza sativa ssp. japonica HOM05D000897 ORTHO05D000716 2.8e-10 70.5 305 27.2
Zm00001eb331150 Zea mays HOM05D000897 ORTHO05D000716 4.7e-10 69.7 300 28.3
MELO3C012925.2 Cucumis melo HOM05D000897 ORTHO05D000716 1.0e-09 68.6 290 27.2
FAN28G1928 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.0e-09 68.6 299 25.4
HanXRQChr10g0284881 Helianthus annuus HOM05D000897 ORTHO05D000716 1.0e-09 68.6 288 26.4
Thecc.04G307600 Theobroma cacao HOM05D000897 ORTHO05D000716 1.8e-09 67.8 302 25.5
CARHR009320 Cardamine hirsuta HOM05D000897 ORTHO05D000716 2.3e-09 67.4 284 27.1
Sed0015729 Sechium edule HOM05D000897 ORTHO05D000716 2.3e-09 67.4 282 27.7
unitig_736.g22927 Utricularia gibba HOM05D000897 ORTHO05D000716 3.0e-09 67.0 287 26.5
Carub.0002s0489 Capsella rubella HOM05D000897 ORTHO05D000716 4.0e-09 66.6 300 25.0
CBR_g39922 Chara braunii HOM05D000897 ORTHO05D000716 4.0e-09 66.6 276 26.8
Os03g0316200 Oryza sativa ssp. japonica HOM05D000897 ORTHO05D000716 4.0e-09 66.6 276 28.3
THA.LOC104802138 Tarenaya hassleriana HOM05D000897 ORTHO05D000716 4.0e-09 66.6 314 24.8
MSTRG.2400 Avicennia marina HOM05D000897 ORTHO05D000716 5.2e-09 66.2 290 26.2
Zm00001eb395600 Zea mays HOM05D000897 ORTHO05D000716 5.2e-09 66.2 266 29.7
Thhalv10023858m.g Eutrema salsugineum HOM05D000897 ORTHO05D000716 6.8e-09 65.9 292 26.0
Cfa006709 Carpinus fangiana HOM05D000897 ORTHO05D000716 8.9e-09 65.5 296 25.0
ClCG10G011650 Citrullus lanatus HOM05D000897 ORTHO05D000716 1.2e-08 65.1 309 25.9
BcaB07g31215 Brassica carinata HOM05D000897 ORTHO05D000716 1.5e-08 64.7 303 25.7
CsaV3_3G031720 Cucumis sativus L. HOM05D000897 ORTHO05D000716 1.5e-08 64.7 290 26.6
FAN26G0205 Fragaria x ananassa HOM05D000897 ORTHO05D000716 2.0e-08 64.3 299 25.4
Hma1.2p1_0536F.1_g173930 Hydrangea macrophylla HOM05D000897 ORTHO05D000716 2.0e-08 64.3 306 26.8
BcaB07g31216 Brassica carinata HOM05D000897 ORTHO05D000716 3.4e-08 63.5 291 26.1
Duzib151G0086 Durio zibethinus HOM05D000897 ORTHO05D000716 4.4e-08 63.2 309 24.9
Gohir.D09G242000 Gossypium hirsutum HOM05D000897 ORTHO05D000716 4.4e-08 63.2 283 26.5
BcaC04g22227 Brassica carinata HOM05D000897 ORTHO05D000716 5.7e-08 62.8 305 25.2
A09p17550 Brassica napus HOM05D000897 ORTHO05D000716 5.7e-08 62.8 299 25.4
C01p37030 Brassica napus HOM05D000897 ORTHO05D000716 5.7e-08 62.8 304 24.7
C09p21840 Brassica napus HOM05D000897 ORTHO05D000716 5.7e-08 62.8 305 25.2
BolC9t55090H Brassica oleracea HOM05D000897 ORTHO05D000716 5.7e-08 62.8 305 25.2
BraA09t37379Z Brassica rapa HOM05D000897 ORTHO05D000716 5.7e-08 62.8 299 25.4
FvH4_1g26560 Fragaria vesca HOM05D000897 ORTHO05D000716 5.7e-08 62.8 299 25.1
Gohir.A09G241300 Gossypium hirsutum HOM05D000897 ORTHO05D000716 5.7e-08 62.8 284 26.8
CBR_g31702 Chara braunii HOM05D000897 ORTHO05D000716 7.5e-08 62.4 261 26.1
DCAR_002914 Daucus carota HOM05D000897 ORTHO05D000716 7.5e-08 62.4 278 25.2
RcHm_v2.0_Chr3g0486641 Rosa chinensis HOM05D000897 ORTHO05D000716 9.8e-08 62.0 303 23.8
unitig_747.g21327 Utricularia gibba HOM05D000897 ORTHO05D000716 9.8e-08 62.0 283 25.4
Gorai.006G265600 Gossypium raimondii HOM05D000897 ORTHO05D000716 1.3e-07 61.6 283 26.5
CANSAT78G0843 Cannabis sativa HOM05D000897 ORTHO05D000716 2.2e-07 60.8 290 24.5
vmacro19777 Vaccinium macrocarpon HOM05D000897 ORTHO05D000716 2.2e-07 60.8 311 25.7
RcHm_v2.0_Chr3g0457631 Rosa chinensis HOM05D000897 ORTHO05D000716 2.9e-07 60.5 296 24.7
Sed0012529 Sechium edule HOM05D000897 ORTHO05D000716 3.7e-07 60.1 282 25.2
AUR62022411 Chenopodium quinoa HOM05D000987 ORTHO05D000831 4.9e-07 59.7 305 22.6
DCAR_002912 Daucus carota HOM05D000897 ORTHO05D000716 6.4e-07 59.3 290 22.8
Dinv30920 Davidia involucrata HOM05D000897 ORTHO05D000716 6.4e-07 59.3 280 26.4
Thhalv10023585m.g Eutrema salsugineum HOM05D000897 ORTHO05D000716 6.4e-07 59.3 302 24.8
Aa31sc210G20 Aethionema arabicum HOM05D000987 ORTHO05D000831 8.3e-07 58.9 302 23.5
Thhalv10024741m.g Eutrema salsugineum HOM05D000987 ORTHO05D000831 8.3e-07 58.9 302 24.2
Rhsim12G0116400 Rhododendron simsii HOM05D000897 ORTHO05D000716 8.3e-07 58.9 293 26.6
FvH4_6g07930 Fragaria vesca HOM05D000897 ORTHO05D000716 1.1e-06 58.5 281 23.8
FAN14G2868 Fragaria x ananassa HOM05D000897 ORTHO05D000716 1.4e-06 58.2 281 23.8
CARHR241380 Cardamine hirsuta HOM05D000987 ORTHO05D000831 3.2e-06 57.0 302 22.8
AT4G33330 Arabidopsis thaliana HOM05D000987 ORTHO05D000831 4.1e-06 56.6 302 22.5
SEGI_00169 Sequoiadendron giganteum HOM05D000897 ORTHO05D000716 4.1e-06 56.6 280 26.1
AL7G18230 Arabidopsis lyrata HOM05D000987 ORTHO05D000831 5.4e-06 56.2 302 22.5
EL10Ac1g01730 Beta vulgaris HOM05D000987 ORTHO05D000831 5.4e-06 56.2 320 21.6
Sp7g31040 Schrenkiella parvula HOM05D000987 ORTHO05D000831 5.4e-06 56.2 302 23.5
Zm00001eb006350 Zea mays HOM05D000987 ORTHO05D000831 5.4e-06 56.2 270 25.2
Dinv30919 Davidia involucrata HOM05D000897 ORTHO05D000716 7.0e-06 55.8 300 25.3
SalBow6G7008 Salvia bowleyana HOM05D000987 ORTHO05D000831 7.0e-06 55.8 289 22.5
SGA_v2.0_scaffold25G10995 Striga asiatica HOM05D000987 ORTHO05D000831 7.0e-06 55.8 287 23.0
SalBow7G1593 Salvia bowleyana HOM05D000987 ORTHO05D000831 9.2e-06 55.5 311 21.5
Sp2g04310 Schrenkiella parvula HOM05D000897 ORTHO05D000716 9.2e-06 55.5 240 27.1


User provided reference genes

Program Settings