Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.4e-89 332.0 155 100.0
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.0e-84 315.1 155 94.2
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 5.8e-59 231.1 141 70.2
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 1.7e-55 219.5 144 67.4
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 9.5e-54 213.8 136 66.2
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 2.1e-53 212.6 143 62.9
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 3.6e-53 211.8 143 62.9
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 1.1e-52 210.3 155 59.4
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.8e-52 209.5 142 63.4
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.8e-52 209.5 142 61.3
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 2.4e-52 209.1 154 60.4
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 5.2e-52 208.0 154 60.4
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 6.8e-52 207.6 152 59.9
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.2e-51 206.8 142 62.7
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.2e-51 206.8 142 62.0
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.5e-51 206.5 142 60.6
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.5e-51 206.5 142 62.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.6e-51 205.7 154 59.1
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.6e-51 205.7 142 60.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 2.6e-51 205.7 142 60.6
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 2.6e-51 205.7 138 63.0
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 3.4e-51 205.3 143 60.8
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 61.3
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 62.0
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 59.9
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 3.4e-51 205.3 142 61.3
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.4e-51 204.9 142 61.3
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 4.4e-51 204.9 136 61.8
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 5.8e-51 204.5 148 58.8
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 5.8e-51 204.5 152 59.2
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.8e-51 204.5 142 60.6
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 7.6e-51 204.1 142 60.6
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 7.6e-51 204.1 142 60.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 7.6e-51 204.1 152 59.2
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 7.6e-51 204.1 136 64.7
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 9.9e-51 203.8 141 61.7
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 9.9e-51 203.8 142 60.6
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 9.9e-51 203.8 142 62.7
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 9.9e-51 203.8 157 56.1
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 1.3e-50 203.4 142 59.9
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.3e-50 203.4 142 60.6
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.3e-50 203.4 141 61.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 1.7e-50 203.0 141 61.0
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.7e-50 203.0 142 60.6
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 2.2e-50 202.6 141 60.3
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 2.2e-50 202.6 142 59.2
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.2e-50 202.6 134 64.2
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 2.2e-50 202.6 154 57.1
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 2.2e-50 202.6 141 61.0
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 2.2e-50 202.6 142 59.2
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.9e-50 202.2 136 61.8
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 2.9e-50 202.2 140 63.6
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.8e-50 201.8 141 61.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.8e-50 201.8 139 59.7
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 3.8e-50 201.8 142 58.5
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.9e-50 201.4 134 63.4
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 4.9e-50 201.4 142 62.0
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 4.9e-50 201.4 142 62.0
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 4.9e-50 201.4 139 62.6
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 8.4e-50 200.7 141 59.6
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.4e-50 200.7 137 61.3
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.4e-50 200.7 142 59.9
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 8.4e-50 200.7 142 59.9
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-49 200.3 141 60.3
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.1e-49 200.3 142 60.6
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.1e-49 200.3 137 65.0
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.4e-49 199.9 143 58.7
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.4e-49 199.9 142 59.2
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 1.9e-49 199.5 142 61.3
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 2.4e-49 199.1 142 58.5
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.2e-49 198.7 142 59.9
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 3.2e-49 198.7 140 61.4
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 3.2e-49 198.7 137 59.9
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 7.1e-49 197.6 142 57.7
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 7.1e-49 197.6 143 60.8
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 7.1e-49 197.6 154 57.8
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 7.1e-49 197.6 140 58.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 1.2e-48 196.8 142 59.9
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 1.2e-48 196.8 143 57.3
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.2e-48 196.8 142 58.5
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-48 196.8 140 57.9
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 1.6e-48 196.4 149 58.4
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 1.6e-48 196.4 149 58.4
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 2.1e-48 196.1 142 57.7
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 2.1e-48 196.1 142 57.7
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.7e-48 195.7 142 58.5
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.7e-48 195.7 140 57.9
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 4.6e-48 194.9 142 57.0
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.0e-47 193.7 135 60.7
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 1.7e-47 193.0 142 57.0
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.7e-47 193.0 142 57.7
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 5.1e-47 191.4 142 59.2
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 3.3e-46 188.7 142 58.5
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 6.2e-45 184.5 125 63.2
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.4e-43 178.3 195 44.1
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 2.2e-42 176.0 141 56.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 4.9e-42 174.9 125 60.0
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 8.4e-42 174.1 150 54.7
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.9e-41 172.9 117 62.4
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 3.2e-41 172.2 140 56.4
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 4.2e-41 171.8 123 58.5
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 2.7e-40 169.1 120 59.2
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 4.6e-40 168.3 136 55.1
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 1.3e-39 166.8 116 59.5
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 2.3e-39 166.0 131 61.1
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.1e-38 163.7 116 58.6
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.3e-38 162.2 102 65.7
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 9.6e-38 160.6 102 65.7
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 4.0e-36 155.2 96 65.6
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 2.0e-35 152.9 104 63.5
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 7.6e-35 151.0 102 60.8
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 3.8e-34 148.7 98 60.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 1.1e-33 147.1 95 65.3
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.2e-33 145.6 95 62.1
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 9.6e-30 134.0 171 38.6
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 3.1e-28 129.0 142 43.0
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 1.6e-24 116.7 89 55.1
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.5e-22 110.2 136 44.9
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 3.8e-18 95.5 68 60.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 6.5e-18 94.7 73 56.2
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 1.1e-17 94.0 67 58.2
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 2.5e-17 92.8 67 58.2
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 1.3e-13 80.5 52 61.5
BolC2t07570H Brassica oleracea HOM05D006321 ORTHO05D007929 1.0e-10 70.9 53 58.5
Nn1g04056 Nelumbo nucifera HOM05D001170 ORTHO05D006602 4.3e-06 55.5 95 32.6


User provided reference genes

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