Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 0.0e+00 1972.6 1125 100.0
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.0e-31 142.5 127 55.1
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 2.8e-30 138.7 130 53.8
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-29 136.7 129 51.9
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.1e-29 136.7 129 51.9
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.6e-25 122.9 127 49.6
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.1e-18 100.1 128 39.1
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 2.6e-15 89.0 128 35.2
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 7.5e-15 87.4 128 38.3
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.3e-14 86.7 128 34.4
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 2.8e-14 85.5 128 35.2
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.8e-14 85.5 128 37.5
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 3.7e-14 85.1 129 34.9
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 4.9e-14 84.7 127 36.2
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 6.3e-14 84.3 128 38.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 6.3e-14 84.3 128 38.3
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 8.3e-14 84.0 128 38.3
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 8.3e-14 84.0 128 38.3
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 1.1e-13 83.6 128 35.2
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 2.4e-13 82.4 140 35.0
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.4e-13 82.4 128 34.4
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 3.1e-13 82.0 128 35.9
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.4e-13 81.3 128 37.5
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.2e-12 80.1 129 32.6
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 1.2e-12 80.1 129 32.6
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 3.5e-12 78.6 128 34.4
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 4.5e-12 78.2 128 32.8
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 5.9e-12 77.8 128 34.4
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 5.9e-12 77.8 127 32.3
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 7.8e-12 77.4 128 32.8
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.0e-11 77.0 127 34.6
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.0e-11 77.0 130 36.9
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 1.3e-11 76.6 127 33.1
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 1.3e-11 76.6 128 32.8
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.7e-11 76.3 127 29.9
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.7e-11 76.3 131 36.6
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 1.7e-11 76.3 128 31.2
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.3e-11 75.9 127 29.1
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.3e-11 75.9 127 29.1
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 2.3e-11 75.9 127 35.4
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 2.9e-11 75.5 127 35.4
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 2.9e-11 75.5 127 29.9
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 3.8e-11 75.1 128 33.6
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.8e-11 75.1 128 32.8
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 3.8e-11 75.1 128 30.5
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 8.6e-11 73.9 127 32.3
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 8.6e-11 73.9 127 33.1
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 1.1e-10 73.6 128 31.2
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 1.5e-10 73.2 127 33.1
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 1.5e-10 73.2 128 32.0
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 1.9e-10 72.8 128 33.6
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 1.9e-10 72.8 127 33.1
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 1.9e-10 72.8 134 30.6
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 1.9e-10 72.8 127 34.6
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.3e-10 72.0 127 34.6
CBR_g20330 Chara braunii HOM05D006771 ORTHO05D008296 4.3e-10 71.6 83 44.6
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 5.6e-10 71.2 127 34.6
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 7.3e-10 70.9 128 29.7
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 1.2e-09 70.1 103 33.0
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 1.6e-09 69.7 127 33.1
AagrBONN_evm.TU.Sc2ySwM_344.4997 Anthoceros agrestis HOM05D062329 ORTHO05D008296 2.1e-09 69.3 101 41.6
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 2.1e-09 69.3 103 34.0
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 2.1e-09 69.3 130 32.3
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 2.8e-09 68.9 127 32.3
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 4.7e-09 68.2 131 31.3
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 4.7e-09 68.2 127 33.9
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 1.4e-08 66.6 127 32.3
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.4e-08 66.6 77 33.8
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 1.4e-08 66.6 127 31.5
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 1.8e-08 66.2 70 48.6
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 1.8e-08 66.2 127 29.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 1.8e-08 66.2 77 35.1
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.8e-08 66.2 127 33.1
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.8e-08 66.2 127 31.5
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 2.3e-08 65.9 127 31.5
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 3.0e-08 65.5 341 22.9
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 3.0e-08 65.5 127 32.3
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 4.0e-08 65.1 72 37.5
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 6.8e-08 64.3 127 29.1
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 6.8e-08 64.3 127 31.5
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 6.8e-08 64.3 127 28.3
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 6.8e-08 64.3 127 29.9
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 1.2e-07 63.5 69 36.2
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 1.5e-07 63.2 233 22.7
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 2.0e-07 62.8 233 23.2
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 2.0e-07 62.8 77 36.4
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.6e-07 62.4 119 32.8
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.4e-07 62.0 127 29.9
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.4e-07 62.0 127 29.9
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 4.4e-07 61.6 261 25.3
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 7.5e-07 60.8 241 22.8
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 1.3e-06 60.1 74 33.8
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 2.9e-06 58.9 243 22.6
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 2.9e-06 58.9 77 35.1
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 3.7e-06 58.5 135 27.4
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 3.7e-06 58.5 72 31.9


User provided reference genes

Program Settings