Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0122 Marchantia polymorpha HOM05D020720 ORTHO05D007477 0.0e+00 2569.3 1343 100.0
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.9e-17 96.3 935 22.7
SEGI_24281 Sequoiadendron giganteum HOM05D000890 ORTHO05D007477 6.0e-11 74.7 879 22.5
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 6.6e-10 71.2 141 36.2
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 1.9e-09 69.7 147 31.3
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 7.3e-09 67.8 118 37.3
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 4.8e-08 65.1 142 31.0
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 8.1e-08 64.3 151 31.1
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 8.1e-08 64.3 112 39.3
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.8e-07 63.2 909 22.3
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.8e-07 63.2 909 22.3
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 2.4e-07 62.8 155 29.0
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 2.4e-07 62.8 149 32.2
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 2.4e-07 62.8 151 32.5
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 3.1e-07 62.4 103 37.9
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 4.0e-07 62.0 93 37.6
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 4.0e-07 62.0 95 36.8
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 5.3e-07 61.6 150 28.7
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.3e-07 61.6 150 28.7
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 5.3e-07 61.6 143 32.2
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 6.9e-07 61.2 111 33.3
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 1.2e-06 60.5 93 39.8
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 1.5e-06 60.1 91 37.4
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 1.5e-06 60.1 95 35.8
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 2.0e-06 59.7 97 37.1
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 2.6e-06 59.3 105 37.1
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 2.6e-06 59.3 109 33.0
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 2.6e-06 59.3 98 37.8
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 3.4e-06 58.9 251 27.9
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.4e-06 58.9 168 29.8
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.4e-06 58.5 95 34.7
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.4e-06 58.5 150 28.0
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.4e-06 58.5 150 27.3
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 4.4e-06 58.5 105 37.1
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 5.8e-06 58.2 142 31.7
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 7.6e-06 57.8 133 30.8
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 7.6e-06 57.8 157 33.8
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 7.6e-06 57.8 135 31.1
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 9.9e-06 57.4 150 27.3
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 9.9e-06 57.4 109 32.1


User provided reference genes

Program Settings