Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0076 Marchantia polymorpha HOM05D013267 ORTHO05D011134 2.6e-158 562.0 280 100.0
AagrBONN_evm.TU.Sc2ySwM_368.1565 Anthoceros agrestis HOM05D013267 ORTHO05D011134 9.7e-89 330.9 284 59.9
SMO165G0144 Selaginella moellendorffii HOM05D013267 ORTHO05D011134 6.5e-77 291.6 283 50.2
Cre16.g688450 Chlamydomonas reinhardtii HOM05D013267 ORTHO05D011134 1.3e-64 250.8 274 51.1
MCO02G316 Micromonas commoda HOM05D013267 ORTHO05D011134 1.7e-61 240.4 275 49.8
CBR_g29428 Chara braunii HOM05D013267 ORTHO05D011134 2.2e-61 240.0 278 47.5
PRCOL_00002030 Prasinoderma coloniale HOM05D013267 ORTHO05D011134 8.3e-56 221.5 276 46.4
Pp3c1_41370 Physcomitrium patens HOM05D013267 ORTHO05D011134 7.8e-38 161.8 273 36.6
Pp3c7_20080 Physcomitrium patens HOM05D013267 ORTHO05D011134 8.1e-27 125.2 250 32.8
PSO339G5653 Papaver somniferum HOM05D009842 ORTHO05D011134 1.9e-20 104.0 219 32.9
Nn2g10535 Nelumbo nucifera HOM05D009842 ORTHO05D011134 2.4e-18 97.1 223 31.8
TAR636G0871 Trochodendron aralioides HOM05D009842 ORTHO05D011134 8.9e-18 95.1 217 32.3
PSO384G1346 Papaver somniferum HOM05D009842 ORTHO05D011134 2.2e-16 90.5 219 32.9
CsaV3_5G006590 Cucumis sativus L. HOM05D009842 ORTHO05D011134 3.5e-14 83.2 218 32.6
Dinv31397 Davidia involucrata HOM05D009842 ORTHO05D011134 4.6e-14 82.8 203 30.5
SEGI_34880 Sequoiadendron giganteum HOM05D013267 ORTHO05D011134 7.8e-14 82.0 74 52.7
Sed0020761 Sechium edule HOM05D009842 ORTHO05D011134 4.3e-12 76.3 219 29.7
MELO3C023815.2 Cucumis melo HOM05D009842 ORTHO05D011134 7.3e-12 75.5 215 29.8
AagrBONN_evm.TU.Sc2ySwM_362.1173 Anthoceros agrestis HOM05D013267 ORTHO05D011134 1.6e-11 74.3 75 50.7
ClCG02G013580 Citrullus lanatus HOM05D009842 ORTHO05D011134 4.8e-11 72.8 215 28.8
SEGI_37027 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 5.3e-10 69.3 99 41.4
Cc02_g08540 Coffea canephora HOM05D009842 ORTHO05D011134 9.0e-10 68.6 106 35.8
Actinidia38217 Actinidia chinensis HOM05D009842 ORTHO05D011134 2.6e-09 67.0 208 26.9
PGSC0003DMG400023509 Solanum tuberosum HOM05D009842 ORTHO05D011134 3.4e-09 66.6 112 38.4
Nitab4.5_0011080g0030 Nicotiana tabacum HOM05D000454 ORTHO05D000591 7.6e-09 65.5 218 28.9
MD01G1118400 Malus domestica HOM05D009842 ORTHO05D011134 9.9e-09 65.1 217 28.6
Nitab4.5_0000914g0210 Nicotiana tabacum HOM05D009842 ORTHO05D011134 1.3e-08 64.7 112 37.5
PGR142G3647 Punica granatum HOM05D009842 ORTHO05D011134 1.3e-08 64.7 220 27.7
Solyc05g054840.3 Solanum lycopersicum HOM05D009842 ORTHO05D011134 4.9e-08 62.8 112 36.6
Sopen05g033310 Solanum pennellii HOM05D009842 ORTHO05D011134 1.1e-07 61.6 112 37.5
HPP92_006590 Vanilla planifolia HOM05D009842 ORTHO05D011134 9.3e-07 58.5 208 26.9
Prupe.2G225500 Prunus persica HOM05D009842 ORTHO05D011134 3.5e-06 56.6 217 24.0


User provided reference genes

Program Settings