Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0075 Marchantia polymorpha HOM05D006806 ORTHO05D008448 1.0e-182 643.3 318 100.0
ATR0796G300 Amborella trichopoda HOM05D006806 ORTHO05D008448 1.8e-54 217.2 281 44.1
Cpa.g.sc9.212 Carica papaya HOM05D006806 ORTHO05D008448 1.3e-52 211.1 305 42.0
Pp3c19_16790 Physcomitrium patens HOM05D006806 ORTHO05D008448 3.7e-52 209.5 283 44.2
ClCG10G010640 Citrullus lanatus HOM05D006806 ORTHO05D008448 1.8e-51 207.2 302 41.4
FAN20G0869 Fragaria x ananassa HOM05D006806 ORTHO05D008448 4.1e-51 206.1 274 40.9
MELO3C017969.2 Cucumis melo HOM05D006806 ORTHO05D008448 5.3e-51 205.7 300 41.3
RcHm_v2.0_Chr6g0293671 Rosa chinensis HOM05D006806 ORTHO05D008448 9.1e-51 204.9 298 39.3
Duzib133G0508 Durio zibethinus HOM05D006806 ORTHO05D008448 1.6e-50 204.1 300 40.0
AagrBONN_evm.TU.Sc2ySwM_117.167 Anthoceros agrestis HOM05D006806 ORTHO05D008448 2.0e-50 203.8 292 41.8
FAN27G1603 Fragaria x ananassa HOM05D006806 ORTHO05D008448 2.0e-50 203.8 274 40.5
Haze_04900 Corylus avellana HOM05D006806 ORTHO05D008448 7.7e-50 201.8 303 39.6
Eucgr.H01159 Eucalyptus grandis HOM05D006806 ORTHO05D008448 1.3e-49 201.1 301 41.2
FvH4_2g25440 Fragaria vesca HOM05D006806 ORTHO05D008448 3.8e-49 199.5 273 40.3
Prupe.8G258600 Prunus persica HOM05D006806 ORTHO05D008448 5.0e-49 199.1 298 39.9
GSVIVG01027979001 Vitis vinifera HOM05D006806 ORTHO05D008448 8.5e-49 198.4 303 40.6
FAN24G3039 Fragaria x ananassa HOM05D006806 ORTHO05D008448 1.1e-48 198.0 274 40.1
FAN15G0699 Fragaria x ananassa HOM05D006806 ORTHO05D008448 1.5e-48 197.6 274 40.1
CSS0020680 Camellia sinensis var. sinensis HOM05D006806 ORTHO05D008448 1.9e-48 197.2 301 38.9
Os11g0657200 Oryza sativa ssp. japonica HOM05D006806 ORTHO05D008448 2.5e-48 196.8 296 43.2
TAR365G0408 Trochodendron aralioides HOM05D006806 ORTHO05D008448 2.5e-48 196.8 308 36.7
Aqoxy5G00723 Aquilegia oxysepala HOM05D006806 ORTHO05D008448 3.2e-48 196.4 298 39.6
FAN15G1766 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.2e-48 196.4 282 39.4
Cfa005945 Carpinus fangiana HOM05D006806 ORTHO05D008448 5.5e-48 195.7 303 39.9
Hma1.2p1_0209F.1_g088560 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 5.5e-48 195.7 297 41.8
MD11G1304900 Malus domestica HOM05D006806 ORTHO05D008448 9.4e-48 194.9 298 40.3
CAN.G339.30 Capsicum annuum HOM05D006806 ORTHO05D008448 1.2e-47 194.5 306 37.9
COL.COLO4_23371 Corchorus olitorius HOM05D006806 ORTHO05D008448 1.2e-47 194.5 300 37.7
MSTRG.21623 Avicennia marina HOM05D006806 ORTHO05D008448 1.6e-47 194.1 314 37.9
HanXRQChr15g0465711 Helianthus annuus HOM05D006806 ORTHO05D008448 1.6e-47 194.1 299 39.1
Sopen09g029740 Solanum pennellii HOM05D006806 ORTHO05D008448 2.1e-47 193.7 254 42.1
Zm00001eb115680 Zea mays HOM05D006806 ORTHO05D008448 2.1e-47 193.7 298 38.9
Peaxi162Scf00067g02523 Petunia axillaris HOM05D006806 ORTHO05D008448 2.7e-47 193.4 253 43.9
THA.LOC104801266 Tarenaya hassleriana HOM05D006806 ORTHO05D008448 2.7e-47 193.4 302 39.7
AUR62008620 Chenopodium quinoa HOM05D006806 ORTHO05D008448 3.6e-47 193.0 314 37.9
Sabra14G0097600 Salix brachista HOM05D006806 ORTHO05D008448 3.6e-47 193.0 300 40.0
Atru.chr5.1178 Acer truncatum HOM05D006806 ORTHO05D008448 8.0e-47 191.8 290 39.3
Solyc09g074920.3 Solanum lycopersicum HOM05D006806 ORTHO05D008448 1.0e-46 191.4 297 39.7
Actinidia24336 Actinidia chinensis HOM05D006806 ORTHO05D008448 3.0e-46 189.9 301 39.5
CANSAT25G1656 Cannabis sativa HOM05D006806 ORTHO05D008448 4.0e-46 189.5 270 40.4
Gorai.008G011300 Gossypium raimondii HOM05D006806 ORTHO05D008448 4.0e-46 189.5 299 38.5
QL12p027175 Quercus lobata HOM05D006806 ORTHO05D008448 4.0e-46 189.5 297 37.7
Thecc.01G297500 Theobroma cacao HOM05D006806 ORTHO05D008448 4.0e-46 189.5 298 39.9
A09p01940 Brassica napus HOM05D006806 ORTHO05D008448 5.2e-46 189.1 271 42.8
Nitab4.5_0000619g0080 Nicotiana tabacum HOM05D006806 ORTHO05D008448 5.2e-46 189.1 300 38.7
BcaNung04058 Brassica carinata HOM05D006806 ORTHO05D008448 8.8e-46 188.3 271 42.8
BolC9t53133H Brassica oleracea HOM05D006806 ORTHO05D008448 8.8e-46 188.3 271 42.8
BraA09t35844Z Brassica rapa HOM05D006806 ORTHO05D008448 1.5e-45 187.6 271 42.4
Potri.014G131200 Populus trichocarpa HOM05D006806 ORTHO05D008448 2.0e-45 187.2 295 38.3
AL6G50560 Arabidopsis lyrata HOM05D006806 ORTHO05D008448 2.6e-45 186.8 295 42.0
PGR119G2452 Punica granatum HOM05D006806 ORTHO05D008448 2.6e-45 186.8 300 40.3
CANSAT25G0048 Cannabis sativa HOM05D006806 ORTHO05D008448 3.3e-45 186.4 270 40.0
Gohir.D12G011300 Gossypium hirsutum HOM05D006806 ORTHO05D008448 3.3e-45 186.4 299 38.1
Rhsim13G0012300 Rhododendron simsii HOM05D006806 ORTHO05D008448 3.3e-45 186.4 299 35.8
Oeu046692.2 Olea europaea HOM05D006806 ORTHO05D008448 4.4e-45 186.0 300 38.0
PGR119G0665 Punica granatum HOM05D006806 ORTHO05D008448 4.4e-45 186.0 298 40.3
Lsat_1_v5_gn_9_1100 Lactuca sativa HOM05D006806 ORTHO05D008448 5.7e-45 185.7 298 37.6
Thhalv10028943m.g Eutrema salsugineum HOM05D006806 ORTHO05D008448 1.3e-44 184.5 291 41.6
Sp6g02400 Schrenkiella parvula HOM05D006806 ORTHO05D008448 1.3e-44 184.5 303 39.9
SMO364G0875 Selaginella moellendorffii HOM05D006806 ORTHO05D008448 1.3e-44 184.5 292 38.7
C09p02030 Brassica napus HOM05D006806 ORTHO05D008448 1.7e-44 184.1 271 42.4
Lalb_Chr21g0312551 Lupinus albus HOM05D006806 ORTHO05D008448 3.7e-44 183.0 273 41.0
Manes.05G063800 Manihot esculenta HOM05D006806 ORTHO05D008448 3.7e-44 183.0 302 36.8
ECA247G0015 Erigeron canadensis HOM05D006806 ORTHO05D008448 4.8e-44 182.6 254 40.6
TWI59G0641 Tripterygium wilfordii HOM05D006806 ORTHO05D008448 4.8e-44 182.6 295 40.0
BcaB01g02036 Brassica carinata HOM05D006806 ORTHO05D008448 1.1e-43 181.4 300 39.3
AT4G02485 Arabidopsis thaliana HOM05D006806 ORTHO05D008448 1.8e-43 180.6 298 41.3
Carub.0006s3464 Capsella rubella HOM05D006806 ORTHO05D008448 1.8e-43 180.6 298 39.9
Ciclev10021759m.g Citrus clementina HOM05D006806 ORTHO05D008448 7.0e-43 178.7 298 38.6
HPP92_014223 Vanilla planifolia HOM05D006806 ORTHO05D008448 7.0e-43 178.7 290 37.2
Hund05413 Selenicereus undatus HOM05D006806 ORTHO05D008448 9.1e-43 178.3 353 35.4
DCAR_002818 Daucus carota HOM05D006806 ORTHO05D008448 1.6e-42 177.6 296 37.5
Glyma.14G026500 Glycine max HOM05D006806 ORTHO05D008448 2.0e-42 177.2 278 38.1
Lj1C32T0 Lonicera japonica HOM05D006806 ORTHO05D008448 2.7e-42 176.8 316 37.0
Cc01_g20670 Coffea canephora HOM05D006806 ORTHO05D008448 1.3e-41 174.5 227 42.7
Phvul.008G264300 Phaseolus vulgaris HOM05D006806 ORTHO05D008448 2.2e-41 173.7 279 38.7
MBI19_g29223_MAGBIO Magnolia biondii HOM05D006806 ORTHO05D008448 5.0e-41 172.6 226 42.0
EL10Ac7g17440 Beta vulgaris HOM05D006806 ORTHO05D008448 6.5e-41 172.2 349 34.4
CiPaw.07G106700 Carya illinoinensis HOM05D006806 ORTHO05D008448 1.9e-40 170.6 251 38.6
Nn3g21440 Nelumbo nucifera HOM05D006806 ORTHO05D008448 3.2e-40 169.9 297 36.0
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 4.2e-40 169.5 256 38.3
Aa31LG5G2120 Aethionema arabicum HOM05D006806 ORTHO05D008448 5.5e-40 169.1 353 34.0
LjContig00310g0013469 Lotus japonicus HOM05D006806 ORTHO05D008448 9.4e-40 168.3 282 38.7
PGSC0003DMG400011394 Solanum tuberosum HOM05D006806 ORTHO05D008448 9.4e-40 168.3 273 39.6
vmacro02466 Vaccinium macrocarpon HOM05D006806 ORTHO05D008448 1.2e-39 167.9 331 34.1
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 1.6e-39 167.5 256 37.9
Migut.D00198 Erythranthe guttata HOM05D006806 ORTHO05D008448 4.7e-39 166.0 305 35.7
VMungo0647G0123 Vigna mungo HOM05D006806 ORTHO05D008448 4.7e-39 166.0 301 35.5
SalBow3G1555 Salvia bowleyana HOM05D006806 ORTHO05D008448 1.4e-38 164.5 323 34.1
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.4e-38 164.5 296 35.5
Ca_06294_v3 Cicer arietinum L. HOM05D006806 ORTHO05D008448 5.2e-38 162.5 306 35.3
Psat2g014480 Pisum sativum HOM05D006806 ORTHO05D008448 8.8e-38 161.8 257 39.7
Medtr5g091920 Medicago truncatula HOM05D006806 ORTHO05D008448 9.8e-37 158.3 306 35.0
CARHR250790 Cardamine hirsuta HOM05D006806 ORTHO05D008448 1.8e-35 154.1 222 43.7
Nitab4.5_0003901g0060 Nicotiana tabacum HOM05D006806 ORTHO05D008448 1.0e-33 148.3 300 33.3
BcaNung04061 Brassica carinata HOM05D000714 ORTHO05D008448 3.3e-32 143.3 189 46.0
Hma1.2p1_0209F.1_g088570 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 5.5e-32 142.5 212 42.0
Dinv19713 Davidia involucrata HOM05D006806 ORTHO05D008448 1.6e-31 141.0 218 39.0
CDE02G3512 Ceratophyllum demersum HOM05D006806 ORTHO05D008448 6.8e-30 135.6 141 48.9
AUR62033171 Chenopodium quinoa HOM05D006806 ORTHO05D008448 9.2e-27 125.2 282 31.6
CsaV3_4G000670 Cucumis sativus L. HOM05D006806 ORTHO05D008448 9.5e-24 115.2 157 42.0
Gohir.A12G010900 Gossypium hirsutum HOM05D006806 ORTHO05D008448 1.6e-23 114.4 296 28.4
Lj1A1G13 Lonicera japonica HOM05D006806 ORTHO05D008448 3.6e-23 113.2 244 35.2
Sed0021826 Sechium edule HOM05D006806 ORTHO05D008448 6.1e-23 112.5 301 30.2
Sc05g0004190 Simmondsia chinensis HOM05D006806 ORTHO05D008448 1.1e-19 101.7 154 38.3
SEGI_33486 Sequoiadendron giganteum HOM05D006806 ORTHO05D008448 6.0e-18 95.9 166 36.1
HPP92_026483 Vanilla planifolia HOM05D006806 ORTHO05D008448 7.8e-18 95.5 143 39.2
unitig_0.g1177 Utricularia gibba HOM05D006806 ORTHO05D008448 7.3e-16 89.0 145 35.2
Duzib116G0666 Durio zibethinus HOM05D006806 ORTHO05D008448 5.8e-13 79.3 95 48.4
CANSAT25G2513 Cannabis sativa HOM05D006806 ORTHO05D008448 1.1e-11 75.1 133 36.1
PRCOL_00002936 Prasinoderma coloniale HOM05D006806 ORTHO05D008448 5.4e-11 72.8 331 26.6
MCO10G232 Micromonas commoda HOM05D006806 ORTHO05D008448 1.0e-09 68.6 338 27.2
Cre16.g695851 Chlamydomonas reinhardtii HOM05D006806 ORTHO05D008448 3.9e-09 66.6 101 39.6
BcaB02g10829 Brassica carinata HOM05D006806 ORTHO05D008448 8.6e-09 65.5 136 33.1
Hund11072 Selenicereus undatus HOM05D007105 ORTHO05D009304 1.9e-08 64.3 254 22.0
Nitab4.5_0006955g0010 Nicotiana tabacum HOM05D007105 ORTHO05D009304 1.1e-06 58.5 261 25.3
Glyma.14G026566 Glycine max HOM05D006806 ORTHO05D008448 6.8e-06 55.8 54 44.4


User provided reference genes

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