Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 5.5e-165 584.3 319 100.0
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 1.6e-50 204.1 186 56.5
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 2.0e-50 203.8 254 45.7
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 5.2e-46 189.1 257 46.3
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 6.8e-46 188.7 206 43.7
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 2.6e-45 186.8 222 45.0
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 5.7e-45 185.7 200 47.0
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 5.7e-45 185.7 206 44.2
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 5.7e-45 185.7 238 42.9
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 9.8e-45 184.9 230 41.7
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 9.8e-45 184.9 207 45.9
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 2.8e-44 183.3 205 44.9
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 2.8e-44 183.3 216 44.0
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 1.1e-43 181.4 209 43.5
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 1.4e-43 181.0 205 45.4
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.8e-43 180.6 209 44.0
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 2.4e-43 180.3 250 40.4
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 2.4e-43 180.3 209 43.1
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 2.4e-43 180.3 200 46.0
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 3.1e-43 179.9 200 45.5
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 4.1e-43 179.5 200 45.5
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 5.4e-43 179.1 234 42.7
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 7.0e-43 178.7 211 44.5
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 7.0e-43 178.7 207 44.0
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 1.6e-42 177.6 207 43.0
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 3.5e-42 176.4 201 42.8
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.5e-42 176.0 207 43.0
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 4.5e-42 176.0 206 42.7
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 4.5e-42 176.0 201 42.3
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 5.9e-42 175.6 205 43.4
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 5.9e-42 175.6 202 46.0
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.0e-41 174.9 204 42.2
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.0e-41 174.9 204 42.2
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 1.0e-41 174.9 201 42.3
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 1.0e-41 174.9 206 43.7
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 1.3e-41 174.5 207 44.0
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 3.8e-41 172.9 212 40.1
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 5.0e-41 172.6 207 42.5
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 5.0e-41 172.6 205 42.4
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.1e-40 171.4 244 40.2
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.5e-40 171.0 242 40.5
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 1.5e-40 171.0 205 40.5
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 4.3e-40 169.5 184 47.3
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 5.6e-40 169.1 215 40.5
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 7.3e-40 168.7 209 42.6
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 3.6e-39 166.4 180 46.7
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 1.4e-38 164.5 184 46.2
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 1.8e-38 164.1 181 47.0
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 1.8e-38 164.1 211 43.6
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-38 163.3 212 42.5
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 8.9e-38 161.8 180 42.2
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 1.5e-37 161.0 221 40.7
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 1.5e-37 161.0 245 36.7
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 5.7e-37 159.1 204 42.2
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.3e-36 157.9 235 40.9
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 3.7e-36 156.4 206 41.7
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 4.9e-36 156.0 207 41.5
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 1.1e-35 154.8 249 36.1
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 1.4e-35 154.5 207 39.6
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 2.4e-35 153.7 228 37.7
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 9.2e-35 151.8 166 44.0
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 4.6e-34 149.4 238 37.8
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 1.3e-33 147.9 232 39.2
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.7e-33 147.5 210 40.5
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 6.6e-33 145.6 184 42.9
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 2.1e-31 140.6 162 43.8
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 5.2e-30 136.0 165 44.2
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 1.2e-29 134.8 238 35.7
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 2.2e-28 130.6 207 38.6
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 1.4e-27 127.9 180 40.0
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 8.6e-25 118.6 136 43.4
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 2.8e-23 113.6 207 35.7
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 6.2e-23 112.5 119 44.5
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 1.1e-22 111.7 133 43.6
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 4.0e-22 109.8 121 47.9
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 3.5e-18 96.7 103 45.6
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 3.9e-17 93.2 158 38.6
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 1.1e-16 91.7 182 32.4
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.2e-15 88.2 98 45.9
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.6e-15 87.8 261 30.7
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-14 84.7 94 42.6
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 4.9e-12 76.3 200 28.0
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 1.1e-11 75.1 80 43.8
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 2.4e-11 73.9 88 38.6
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.2e-10 71.6 78 44.9
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 2.5e-08 63.9 80 42.5
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 8.9e-06 55.5 63 46.0


User provided reference genes

Program Settings