Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0046 Marchantia polymorpha HOM05D004543 ORTHO05D006042 0.0e+00 1479.2 763 100.0
Pp3c14_17740 Physcomitrium patens HOM05D004543 ORTHO05D006042 9.2e-259 897.1 765 63.3
SEGI_19802 Sequoiadendron giganteum HOM05D004543 ORTHO05D006042 3.0e-257 892.1 755 61.6
AagrBONN_evm.TU.Sc2ySwM_344.2190 Anthoceros agrestis HOM05D004543 ORTHO05D006042 5.6e-256 887.9 759 62.2
Pp3c17_20170 Physcomitrium patens HOM05D004543 ORTHO05D006042 1.9e-251 872.8 742 63.3
Nn3g16500 Nelumbo nucifera HOM05D004543 ORTHO05D006042 3.5e-242 842.0 745 59.9
Dinv11159 Davidia involucrata HOM05D004543 ORTHO05D006042 9.0e-238 827.4 756 57.9
Ciclev10018979m.g Citrus clementina HOM05D004543 ORTHO05D006042 8.4e-236 820.8 756 56.3
vmacro19212 Vaccinium macrocarpon HOM05D004543 ORTHO05D006042 1.6e-234 816.6 744 56.6
Actinidia25587 Actinidia chinensis HOM05D004543 ORTHO05D006042 3.5e-234 815.5 750 57.2
CSS0037462 Camellia sinensis var. sinensis HOM05D004543 ORTHO05D006042 3.9e-233 812.0 754 56.8
Actinidia15838 Actinidia chinensis HOM05D004543 ORTHO05D006042 1.1e-232 810.4 759 56.8
CiPaw.11G008900 Carya illinoinensis HOM05D004543 ORTHO05D006042 3.3e-232 808.9 753 57.0
MD06G1143400 Malus domestica HOM05D004543 ORTHO05D006042 4.3e-232 808.5 754 56.8
PGR083G0162 Punica granatum HOM05D004543 ORTHO05D006042 1.6e-231 806.6 753 56.7
Gohir.A11G168800 Gossypium hirsutum HOM05D004543 ORTHO05D006042 8.1e-231 804.3 753 56.6
Ca_00911_v3 Cicer arietinum L. HOM05D004543 ORTHO05D006042 6.9e-230 801.2 759 56.1
Gohir.D11G175000 Gossypium hirsutum HOM05D004543 ORTHO05D006042 9.0e-230 800.8 756 56.1
Cfa018837 Carpinus fangiana HOM05D004543 ORTHO05D006042 1.5e-229 800.0 753 56.3
Aqoxy5G03415 Aquilegia oxysepala HOM05D004543 ORTHO05D006042 2.0e-229 799.7 746 57.5
Gorai.007G187600 Gossypium raimondii HOM05D004543 ORTHO05D006042 2.0e-229 799.7 753 56.0
COL.COLO4_26675 Corchorus olitorius HOM05D004543 ORTHO05D006042 3.4e-229 798.9 754 56.5
Thecc.06G039500 Theobroma cacao HOM05D004543 ORTHO05D006042 3.4e-229 798.9 757 56.4
Haze_07231 Corylus avellana HOM05D004543 ORTHO05D006042 4.5e-229 798.5 753 56.3
PSO782G5417 Papaver somniferum HOM05D004543 ORTHO05D006042 7.6e-229 797.7 757 55.7
Manes.06G118300 Manihot esculenta HOM05D004543 ORTHO05D006042 1.7e-228 796.6 757 56.5
Eucgr.B00121 Eucalyptus grandis HOM05D004543 ORTHO05D006042 2.2e-228 796.2 750 56.9
GSVIVG01008523001 Vitis vinifera HOM05D004543 ORTHO05D006042 2.9e-228 795.8 746 56.4
Lalb_Chr07g0183361 Lupinus albus HOM05D004543 ORTHO05D006042 3.8e-228 795.4 753 55.5
Migut.I00508 Erythranthe guttata HOM05D004543 ORTHO05D006042 2.5e-227 792.7 761 56.4
Atru.chr9.1076 Acer truncatum HOM05D004543 ORTHO05D006042 4.2e-227 792.0 763 55.0
PSO063G5574 Papaver somniferum HOM05D004543 ORTHO05D006042 4.2e-227 792.0 757 55.4
Lsat_1_v5_gn_4_76761 Lactuca sativa HOM05D004543 ORTHO05D006042 7.1e-227 791.2 756 56.2
Medtr4g103610 Medicago truncatula HOM05D004543 ORTHO05D006042 9.3e-227 790.8 758 55.1
QL10p004063 Quercus lobata HOM05D004543 ORTHO05D006042 9.3e-227 790.8 768 54.8
Duzib138G1537 Durio zibethinus HOM05D004543 ORTHO05D006042 1.2e-226 790.4 754 56.4
arahy.Tifrunner.gnm1.ann1.9QW7J0 Arachis hypogaea HOM05D004543 ORTHO05D006042 2.7e-226 789.3 750 55.5
MD14G1158600 Malus domestica HOM05D004543 ORTHO05D006042 7.9e-226 787.7 751 55.5
arahy.Tifrunner.gnm1.ann1.28ZGNX Arachis hypogaea HOM05D004543 ORTHO05D006042 1.3e-225 786.9 750 55.2
CANSAT80G2145 Cannabis sativa HOM05D004543 ORTHO05D006042 3.9e-225 785.4 739 55.9
TWI23G0493 Tripterygium wilfordii HOM05D004543 ORTHO05D006042 5.1e-225 785.0 753 56.3
Oeu056011.1 Olea europaea HOM05D004543 ORTHO05D006042 1.1e-224 783.9 758 54.9
RcHm_v2.0_Chr7g0190411 Rosa chinensis HOM05D004543 ORTHO05D006042 3.3e-224 782.3 750 55.3
Lj9C477T19 Lonicera japonica HOM05D004543 ORTHO05D006042 7.4e-224 781.2 788 53.8
Potri.012G096100 Populus trichocarpa HOM05D004543 ORTHO05D006042 7.4e-224 781.2 753 55.6
Phvul.003G210200 Phaseolus vulgaris HOM05D004543 ORTHO05D006042 2.1e-223 779.6 757 55.0
Hund02429 Selenicereus undatus HOM05D004543 ORTHO05D006042 2.1e-223 779.6 755 56.0
FAN13G0766 Fragaria x ananassa HOM05D004543 ORTHO05D006042 2.8e-223 779.2 743 55.9
VMungo1215G3183 Vigna mungo HOM05D004543 ORTHO05D006042 3.7e-223 778.9 753 55.0
ATR0561G088 Amborella trichopoda HOM05D004543 ORTHO05D006042 6.2e-223 778.1 731 56.1
Sabra15G0115500 Salix brachista HOM05D004543 ORTHO05D006042 6.2e-223 778.1 765 55.2
Glyma.17G129100 Glycine max HOM05D004543 ORTHO05D006042 8.2e-223 777.7 757 54.8
Prupe.5G152600 Prunus persica HOM05D004543 ORTHO05D006042 1.8e-222 776.5 754 54.5
ClCG11G005570 Citrullus lanatus HOM05D004543 ORTHO05D006042 2.4e-222 776.2 760 55.1
Potri.015G094000 Populus trichocarpa HOM05D004543 ORTHO05D006042 3.1e-222 775.8 765 55.3
Lj4g0012876 Lotus japonicus HOM05D004543 ORTHO05D006042 5.3e-222 775.0 754 54.5
Glyma.05G047300 Glycine max HOM05D004543 ORTHO05D006042 6.9e-222 774.6 755 54.7
HanXRQChr09g0273071 Helianthus annuus HOM05D004543 ORTHO05D006042 1.2e-221 773.9 762 55.4
unitig_8.g3033 Utricularia gibba HOM05D004543 ORTHO05D006042 1.2e-221 773.9 754 54.5
FvH4_5g08050 Fragaria vesca HOM05D004543 ORTHO05D006042 2.6e-221 772.7 767 54.5
FAN18G3295 Fragaria x ananassa HOM05D004543 ORTHO05D006042 5.8e-221 771.5 767 54.5
SMO347G0349 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 7.6e-221 771.2 739 56.8
CsaV3_6G002430 Cucumis sativus L. HOM05D004543 ORTHO05D006042 1.0e-220 770.8 753 54.4
FAN04G2916 Fragaria x ananassa HOM05D004543 ORTHO05D006042 2.9e-220 769.2 755 54.7
SGA_v2.0_scaffold161G37784 Striga asiatica HOM05D004543 ORTHO05D006042 6.5e-220 768.1 758 55.1
EL10As4g23416 Beta vulgaris HOM05D004543 ORTHO05D006042 8.4e-220 767.7 761 54.9
AUR62029871 Chenopodium quinoa HOM05D004543 ORTHO05D006042 2.5e-219 766.1 757 54.8
Cc07_g18860 Coffea canephora HOM05D004543 ORTHO05D006042 2.1e-218 763.1 749 53.7
AT4G24840 Arabidopsis thaliana HOM05D004543 ORTHO05D006042 1.8e-217 760.0 747 54.5
AL7G28340 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 2.3e-217 759.6 746 54.2
MELO3C025044.2 Cucumis melo HOM05D004543 ORTHO05D006042 3.0e-217 759.2 760 53.6
THA.LOC104811593 Tarenaya hassleriana HOM05D004543 ORTHO05D006042 5.1e-217 758.4 754 53.4
Nitab4.5_0002497g0060 Nicotiana tabacum HOM05D004543 ORTHO05D006042 4.3e-216 755.4 761 53.0
Hma1.2p1_1271F.1_g271760 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 5.7e-216 755.0 712 56.2
Os03g0849600 Oryza sativa ssp. japonica HOM05D004543 ORTHO05D006042 7.4e-216 754.6 747 54.2
Carub.0007s1621 Capsella rubella HOM05D004543 ORTHO05D006042 9.7e-216 754.2 747 53.5
Sed0023388 Sechium edule HOM05D004543 ORTHO05D006042 9.7e-216 754.2 756 53.6
PGSC0003DMG400026304 Solanum tuberosum HOM05D004543 ORTHO05D006042 3.7e-215 752.3 763 53.1
C01p20140 Brassica napus HOM05D004543 ORTHO05D006042 4.8e-215 751.9 746 53.5
BolC1t01943H Brassica oleracea HOM05D004543 ORTHO05D006042 4.8e-215 751.9 746 53.5
Nitab4.5_0001187g0130 Nicotiana tabacum HOM05D004543 ORTHO05D006042 8.2e-215 751.1 761 52.7
Sopen08g002610 Solanum pennellii HOM05D004543 ORTHO05D006042 8.2e-215 751.1 763 52.8
A01p16150 Brassica napus HOM05D004543 ORTHO05D006042 1.1e-214 750.7 758 52.8
BraA01t01551Z Brassica rapa HOM05D004543 ORTHO05D006042 1.1e-214 750.7 758 52.8
Sed0026192 Sechium edule HOM05D004543 ORTHO05D006042 3.1e-214 749.2 756 53.3
Thhalv10024490m.g Eutrema salsugineum HOM05D004543 ORTHO05D006042 5.9e-213 745.0 746 53.4
ECA232G1394 Erigeron canadensis HOM05D004543 ORTHO05D006042 8.5e-212 741.1 750 53.7
Migut.I00509 Erythranthe guttata HOM05D004543 ORTHO05D006042 1.1e-211 740.7 744 53.6
CDE05G1945 Ceratophyllum demersum HOM05D004543 ORTHO05D006042 1.9e-211 740.0 748 54.4
Sp7g22830 Schrenkiella parvula HOM05D004543 ORTHO05D006042 3.2e-211 739.2 746 53.2
BcaC06g32853 Brassica carinata HOM05D004543 ORTHO05D006042 4.2e-211 738.8 746 53.2
BolC7t45874H Brassica oleracea HOM05D004543 ORTHO05D006042 4.2e-211 738.8 746 53.2
C07p53840 Brassica napus HOM05D004543 ORTHO05D006042 7.2e-211 738.0 746 52.9
Cpa.g.sc13.138 Carica papaya HOM05D004543 ORTHO05D006042 2.3e-209 733.0 752 53.2
A03p55600 Brassica napus HOM05D004543 ORTHO05D006042 1.5e-208 730.3 746 52.7
BraA03t14627Z Brassica rapa HOM05D004543 ORTHO05D006042 1.5e-208 730.3 746 52.7
Zm00001eb210790 Zea mays HOM05D004543 ORTHO05D006042 2.5e-208 729.6 747 53.8
TAR622G0482 Trochodendron aralioides HOM05D004543 ORTHO05D006042 4.8e-207 725.3 670 58.2
CAN.G906.5 Capsicum annuum HOM05D004543 ORTHO05D006042 9.1e-206 721.1 752 52.5
Peaxi162Scf00045g00192 Petunia axillaris HOM05D004543 ORTHO05D006042 1.5e-205 720.3 749 51.4
Aa31LG7G11000 Aethionema arabicum HOM05D004543 ORTHO05D006042 4.5e-205 718.8 775 51.1
Carub.0003s0428 Capsella rubella HOM05D004543 ORTHO05D006042 1.0e-204 717.6 747 51.7
AL3G15410 Arabidopsis lyrata HOM05D004543 ORTHO05D006042 8.8e-201 704.5 747 51.0
CBR_g49627 Chara braunii HOM05D004543 ORTHO05D006042 2.8e-191 672.9 601 60.2
Psat0s3466g0040 Pisum sativum HOM05D004543 ORTHO05D006042 9.1e-190 667.9 634 55.8
Sp6g25960 Schrenkiella parvula HOM05D004543 ORTHO05D006042 1.7e-188 663.7 752 48.1
FAN08G2446 Fragaria x ananassa HOM05D004543 ORTHO05D006042 2.9e-188 662.9 769 48.9
BcaNung06004 Brassica carinata HOM05D004543 ORTHO05D006042 1.6e-186 657.1 695 51.7
SHI28598 Sapria himalayana HOM05D004543 ORTHO05D006042 2.0e-184 650.2 820 45.7
AUR62025843 Chenopodium quinoa HOM05D004543 ORTHO05D006042 4.1e-182 642.5 661 52.6
A03p08790 Brassica napus HOM05D004543 ORTHO05D006042 3.5e-181 639.4 750 48.0
C03p10280 Brassica napus HOM05D004543 ORTHO05D006042 4.2e-179 632.5 751 47.5
BraA03t10204Z Brassica rapa HOM05D004543 ORTHO05D006042 4.2e-179 632.5 751 47.5
HPP92_007000 Vanilla planifolia HOM05D004543 ORTHO05D006042 6.1e-178 628.6 750 48.8
BolC3t13508H Brassica oleracea HOM05D004543 ORTHO05D006042 1.5e-176 624.0 750 46.7
BcaB01g05188 Brassica carinata HOM05D004543 ORTHO05D006042 1.0e-169 601.3 727 46.5
TPR.G19235 Trifolium pratense HOM05D004543 ORTHO05D006042 2.4e-166 590.1 648 51.2
Dinv04875 Davidia involucrata HOM05D004543 ORTHO05D006042 4.4e-160 569.3 529 55.8
Rhsim08G0188800 Rhododendron simsii HOM05D004543 ORTHO05D006042 4.4e-160 569.3 529 55.2
Sc04g0000730 Simmondsia chinensis HOM05D004543 ORTHO05D006042 5.0e-156 555.8 537 54.2
Solyc08g006660.2 Solanum lycopersicum HOM05D004543 ORTHO05D006042 1.5e-152 544.3 549 53.7
CARHR232260 Cardamine hirsuta HOM05D004543 ORTHO05D006042 1.3e-148 531.2 534 51.7
BcaNung04937 Brassica carinata HOM05D004543 ORTHO05D006042 2.5e-147 526.9 726 43.1
PRCOL_00002621 Prasinoderma coloniale HOM05D004543 ORTHO05D006042 1.6e-130 471.1 735 39.3
DCAR_026221 Daucus carota HOM05D004543 ORTHO05D006042 5.6e-123 446.0 745 38.9
Sabra12G0070400 Salix brachista HOM05D004543 ORTHO05D006042 2.5e-115 420.6 395 58.5
Zm00001eb064480 Zea mays HOM05D004543 ORTHO05D006042 7.1e-110 402.5 375 56.8
MCO07G105 Micromonas commoda HOM05D004543 ORTHO05D006042 5.9e-96 356.3 749 31.8
Cre09.g402750 Chlamydomonas reinhardtii HOM05D004543 ORTHO05D006042 1.4e-89 335.1 838 31.3
Manes.14G052401 Manihot esculenta HOM05D004543 ORTHO05D006042 6.7e-84 316.2 347 48.1
Medtr3g105000 Medicago truncatula HOM05D004543 ORTHO05D006042 3.1e-73 280.8 467 38.5
Hma1.2p1_0140F.1_g063450 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 1.4e-57 228.8 226 53.1
Sc04g0000720 Simmondsia chinensis HOM05D004543 ORTHO05D006042 9.2e-57 226.1 221 57.0
HPP92_006979 Vanilla planifolia HOM05D004543 ORTHO05D006042 5.6e-54 216.9 541 32.5
Hma1.2p1_0140F.1_g063430 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 1.6e-32 145.6 216 42.1
SEGI_01008 Sequoiadendron giganteum HOM05D004543 ORTHO05D037602 1.2e-29 136.0 112 55.4
TPR.G18590 Trifolium pratense HOM05D001327 ORTHO05D002270 1.5e-27 129.0 124 50.0
Medtr7g104380 Medicago truncatula HOM05D004543 ORTHO05D006042 8.4e-26 123.2 180 42.8
Rhsim02G0055400 Rhododendron simsii HOM05D004543 ORTHO05D006042 1.4e-25 122.5 92 65.2
Medtr3g105005 Medicago truncatula HOM05D004543 ORTHO05D006042 4.1e-25 120.9 200 38.0
SMO117G0159 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 2.5e-22 111.7 93 61.3
Rhsim05G0168000 Rhododendron simsii HOM05D003391 ORTHO05D005563 4.7e-21 107.5 80 66.2
Lsat_1_v5_gn_5_92440 Lactuca sativa HOM05D004543 ORTHO05D006042 3.1e-20 104.8 148 41.9
Rhsim04G0209800 Rhododendron simsii HOM05D004543 ORTHO05D006042 8.9e-20 103.2 80 63.8
TPR.G34490 Trifolium pratense HOM05D004543 ORTHO05D006042 8.9e-20 103.2 100 50.0
PSO675G5444 Papaver somniferum HOM05D004543 ORTHO05D010954 1.4e-17 95.9 183 36.6
SMO301G0055 Selaginella moellendorffii HOM05D004543 ORTHO05D000231 6.0e-16 90.5 96 49.0
SMO250G0003 Selaginella moellendorffii HOM05D004543 ORTHO05D006042 5.1e-15 87.4 65 66.2
vmacro20276 Vaccinium macrocarpon HOM05D004543 ORTHO05D037602 5.6e-14 84.0 83 50.6
Manes.14G052501 Manihot esculenta HOM05D004543 ORTHO05D006042 2.1e-13 82.0 223 31.8
Lsat_1_v5_gn_3_118241 Lactuca sativa HOM05D004543 ORTHO05D001664 2.9e-10 71.6 134 36.6
TPR.G22932 Trifolium pratense HOM05D004543 ORTHO05D037602 1.2e-08 66.2 92 39.1
Hma1.2p1_0140F.1_g063440 Hydrangea macrophylla HOM05D004543 ORTHO05D006042 3.5e-08 64.7 69 49.3
FAN06G0151 Fragaria x ananassa HOM05D004543 ORTHO05D022695 1.1e-06 59.7 119 32.8
FAN06G1316 Fragaria x ananassa HOM05D004543 ORTHO05D022695 2.5e-06 58.5 68 45.6
TPR.G19226 Trifolium pratense HOM05D004543 ORTHO05D006042 3.3e-06 58.2 59 55.9


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