Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.3e-110 402.1 192 100.0
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 9.7e-48 194.1 163 55.8
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 6.3e-47 191.4 162 54.9
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 3.1e-46 189.1 162 53.7
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 3.1e-46 189.1 165 52.7
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 7.0e-46 188.0 163 52.8
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 9.1e-46 187.6 161 51.6
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.0e-45 186.4 162 51.9
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 3.4e-45 185.7 161 51.6
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 4.5e-45 185.3 163 52.1
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.5e-45 185.3 161 52.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 4.5e-45 185.3 161 52.8
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 5.9e-45 184.9 162 51.9
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 5.9e-45 184.9 162 51.2
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 5.9e-45 184.9 161 53.4
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 5.9e-45 184.9 165 50.9
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.0e-44 184.1 161 52.8
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.3e-44 183.7 165 52.1
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 1.7e-44 183.3 167 50.3
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 2.2e-44 183.0 161 52.8
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 2.2e-44 183.0 170 51.8
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 2.9e-44 182.6 161 55.9
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 3.8e-44 182.2 162 53.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.8e-44 182.2 164 50.0
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 6.5e-44 181.4 165 51.5
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 6.5e-44 181.4 161 52.8
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 8.5e-44 181.0 168 57.1
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.1e-43 180.6 164 48.8
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.1e-43 180.6 164 50.0
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.4e-43 180.3 161 52.2
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.9e-43 179.9 161 52.2
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.2e-43 178.7 160 51.9
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 7.2e-43 177.9 162 51.2
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 7.2e-43 177.9 162 48.8
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 7.2e-43 177.9 157 51.6
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 9.4e-43 177.6 161 51.6
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 9.4e-43 177.6 162 49.4
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 9.4e-43 177.6 162 52.5
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.2e-42 177.2 162 51.2
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 1.2e-42 177.2 158 51.3
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.6e-42 176.8 163 50.3
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 1.6e-42 176.8 168 50.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.1e-42 176.4 162 49.4
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 2.1e-42 176.4 159 52.2
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 2.1e-42 176.4 164 48.2
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 2.7e-42 176.0 165 50.3
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 2.7e-42 176.0 150 52.7
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 3.6e-42 175.6 160 51.9
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 3.6e-42 175.6 160 48.8
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 6.1e-42 174.9 159 52.8
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 6.1e-42 174.9 158 50.6
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 8.0e-42 174.5 160 52.5
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.0e-41 174.1 159 47.8
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.0e-41 174.1 159 52.8
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.0e-41 174.1 194 49.0
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 1.4e-41 173.7 162 51.2
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-41 173.7 163 51.5
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 2.3e-41 172.9 162 50.0
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 3.0e-41 172.6 165 51.5
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 3.9e-41 172.2 165 46.7
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 3.9e-41 172.2 165 46.7
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 3.9e-41 172.2 163 50.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 5.2e-41 171.8 162 50.6
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 6.7e-41 171.4 161 49.7
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 6.7e-41 171.4 164 51.2
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 8.8e-41 171.0 165 47.9
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 1.5e-40 170.2 161 49.7
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.5e-40 170.2 154 50.0
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.0e-40 169.9 162 51.2
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.3e-40 169.1 165 46.7
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.3e-40 169.1 159 45.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 4.4e-40 168.7 163 47.2
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 4.4e-40 168.7 165 45.5
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 7.4e-40 167.9 158 48.1
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 9.7e-40 167.5 163 49.7
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 1.3e-39 167.2 161 48.4
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.3e-39 167.2 162 50.0
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.7e-39 166.8 161 49.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 2.2e-39 166.4 158 47.5
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 6.3e-39 164.9 160 47.5
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 8.2e-39 164.5 163 48.5
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 1.8e-38 163.3 165 46.1
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.1e-38 162.5 161 49.1
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 4.1e-38 162.2 163 49.1
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 4.1e-38 162.2 159 47.8
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 4.1e-38 162.2 162 46.3
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.3e-38 161.8 162 46.3
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 2.6e-37 159.5 153 47.7
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 7.7e-37 157.9 161 46.6
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.7e-36 156.8 161 44.7
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 2.2e-36 156.4 161 47.8
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 6.5e-36 154.8 160 45.0
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 8.5e-36 154.5 161 45.3
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 8.5e-36 154.5 164 46.3
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.5e-35 152.9 141 52.5
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 5.5e-35 151.8 164 45.1
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 1.0e-33 147.5 162 46.3
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 1.8e-33 146.7 166 44.6
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 3.0e-33 146.0 141 47.5
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 8.8e-33 144.4 163 46.6
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.0e-32 143.3 147 50.3
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 9.7e-32 141.0 168 41.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.3e-31 140.6 166 44.0
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 1.7e-31 140.2 141 46.8
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 8.2e-31 137.9 139 46.0
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 7.0e-30 134.8 139 45.3
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 7.0e-30 134.8 118 53.4
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-28 130.6 173 39.9
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 6.5e-28 128.3 131 46.6
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.6e-26 123.6 142 45.1
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.4e-24 115.5 113 46.0
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 8.6e-20 101.3 165 35.2
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 1.2e-18 97.4 127 41.7
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 1.8e-17 93.6 80 52.5
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 2.8e-15 86.3 86 50.0
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 1.2e-13 80.9 106 37.7
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 2.6e-08 63.2 153 30.1
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 7.0e-06 55.1 43 51.2
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 9.2e-06 54.7 49 44.9


User provided reference genes

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