Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 9.9e-189 663.3 337 100.0
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 1.3e-79 300.8 226 65.9
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 2.5e-59 233.4 175 66.9
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 1.3e-58 231.1 212 57.1
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 3.7e-58 229.6 199 58.8
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 3.7e-58 229.6 196 61.2
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 6.2e-58 228.8 196 60.7
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 1.1e-57 228.0 175 63.4
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 1.1e-57 228.0 175 65.7
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 1.8e-57 227.3 210 55.7
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 4.0e-57 226.1 174 63.2
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 9.0e-57 224.9 174 63.2
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 9.0e-57 224.9 174 64.9
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 1.2e-56 224.6 206 56.8
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 1.2e-56 224.6 176 63.1
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 1.2e-56 224.6 194 61.3
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 2.0e-56 223.8 174 62.1
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 3.4e-56 223.0 207 56.5
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 3.4e-56 223.0 223 53.8
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 3.4e-56 223.0 174 63.2
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 4.5e-56 222.6 175 64.6
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 4.5e-56 222.6 175 65.1
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 5.8e-56 222.2 175 64.6
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 5.8e-56 222.2 209 54.5
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 7.6e-56 221.9 174 63.2
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 7.6e-56 221.9 174 63.2
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 7.6e-56 221.9 175 62.9
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 7.6e-56 221.9 174 62.6
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 1.0e-55 221.5 175 62.3
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.0e-55 221.5 175 63.4
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 1.0e-55 221.5 175 63.4
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.3e-55 221.1 175 63.4
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 1.3e-55 221.1 223 53.8
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 1.3e-55 221.1 223 53.8
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 1.3e-55 221.1 174 60.9
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 1.7e-55 220.7 215 54.9
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 1.7e-55 220.7 254 50.8
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 1.7e-55 220.7 174 63.2
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 2.2e-55 220.3 174 62.1
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 2.2e-55 220.3 202 57.9
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 2.2e-55 220.3 175 62.9
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 2.2e-55 220.3 175 63.4
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 3.8e-55 219.5 175 61.7
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 3.8e-55 219.5 174 62.6
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 3.8e-55 219.5 174 63.2
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 3.8e-55 219.5 175 62.9
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 4.9e-55 219.2 174 60.9
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 4.9e-55 219.2 177 62.7
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 6.5e-55 218.8 175 61.7
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 6.5e-55 218.8 175 60.6
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 6.5e-55 218.8 175 63.4
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 8.4e-55 218.4 175 61.1
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 1.1e-54 218.0 175 61.1
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 1.1e-54 218.0 175 60.6
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.4e-54 217.6 181 59.7
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 1.4e-54 217.6 175 61.1
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 1.9e-54 217.2 202 57.4
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 1.9e-54 217.2 192 59.9
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 2.5e-54 216.9 175 62.3
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 2.5e-54 216.9 175 62.3
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 3.2e-54 216.5 174 62.1
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 4.2e-54 216.1 174 59.2
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 59.4
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 60.0
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 60.0
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 60.0
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 60.0
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 5.5e-54 215.7 175 60.0
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 5.5e-54 215.7 236 49.6
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 7.1e-54 215.3 183 59.0
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 7.1e-54 215.3 176 61.9
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 7.1e-54 215.3 193 58.0
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 9.3e-54 214.9 174 60.3
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 9.3e-54 214.9 184 57.1
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 9.3e-54 214.9 184 57.1
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 1.6e-53 214.2 206 54.9
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 1.6e-53 214.2 175 60.6
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 2.7e-53 213.4 199 56.8
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 3.5e-53 213.0 194 57.7
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 4.6e-53 212.6 191 58.1
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 7.9e-53 211.8 175 61.1
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 7.9e-53 211.8 191 57.1
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 1.0e-52 211.5 218 53.7
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 2.3e-52 210.3 175 61.1
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 3.0e-52 209.9 183 56.3
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 6.7e-52 208.8 183 56.3
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 6.7e-52 208.8 209 57.4
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 1.9e-51 207.2 223 52.9
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 2.5e-51 206.8 183 55.7
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 2.5e-51 206.8 183 55.7
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.3e-51 206.5 174 59.2
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 3.3e-51 206.5 174 59.2
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 5.7e-51 205.7 183 55.2
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 9.6e-51 204.9 183 54.6
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 9.6e-51 204.9 183 54.6
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.6e-50 204.1 178 56.2
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 2.8e-50 203.4 183 55.2
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 1.1e-49 201.4 169 59.2
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 1.1e-49 201.4 201 51.2
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 1.4e-49 201.1 174 55.7
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 1.8e-49 200.7 222 49.1
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 3.4e-48 196.4 173 57.2
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 7.6e-48 195.3 169 59.2
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 2.2e-47 193.7 174 55.7
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 2.9e-47 193.4 174 56.3
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 1.9e-46 190.7 176 53.4
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 1.0e-44 184.9 152 60.5
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 4.8e-42 176.0 141 59.6
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 5.3e-41 172.6 182 52.2
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 2.3e-36 157.1 137 52.6
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 2.6e-32 143.7 106 64.2
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 1.1e-22 111.7 95 55.8
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-21 108.2 179 42.5
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 8.0e-21 105.5 96 57.3
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 1.7e-18 97.8 75 54.7
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 2.4e-17 94.0 74 58.1
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 1.4e-12 78.2 59 55.9
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 2.8e-10 70.5 71 46.5
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 2.2e-07 60.8 44 63.6
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 4.2e-06 56.6 48 54.2


User provided reference genes

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