Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 0.0e+00 1175.2 570 100.0
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 1.6e-159 567.0 576 51.6
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.4e-155 552.0 546 51.3
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 4.8e-151 538.9 546 49.8
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 4.0e-150 535.8 561 50.6
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 6.9e-150 535.0 548 50.5
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 1.5e-149 533.9 544 49.6
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 1.5e-149 533.9 550 50.4
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 7.6e-149 531.6 552 49.5
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.3e-148 530.8 554 49.3
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 3.8e-148 529.3 552 48.7
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 4.9e-148 528.9 551 50.1
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.1e-147 527.7 546 49.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 1.4e-147 527.3 545 50.1
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 1.4e-147 527.3 553 49.7
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 1.9e-147 526.9 552 49.6
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 1.9e-147 526.9 550 49.6
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 3.2e-147 526.2 557 47.6
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 3.2e-147 526.2 546 49.6
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.3e-147 524.6 546 49.8
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 9.3e-147 524.6 560 49.1
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.6e-146 523.9 548 49.6
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 4.6e-146 522.3 565 48.1
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 6.0e-146 521.9 546 49.6
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 6.0e-146 521.9 545 49.7
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 7.9e-146 521.5 547 48.6
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 7.9e-146 521.5 546 49.3
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.3e-145 520.8 548 49.3
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 1.3e-145 520.8 546 49.5
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 3.0e-145 519.6 550 48.7
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 8.7e-145 518.1 563 46.7
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 8.7e-145 518.1 540 48.9
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 1.1e-144 517.7 548 50.0
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 1.5e-144 517.3 549 49.4
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 4.3e-144 515.8 546 49.8
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 5.6e-144 515.4 552 48.4
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 5.6e-144 515.4 546 49.6
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 7.4e-144 515.0 548 48.4
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 9.6e-144 514.6 549 50.6
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 9.6e-144 514.6 567 47.1
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.6e-143 513.8 552 49.5
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 1.4e-142 510.8 545 47.7
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.4e-142 510.8 547 49.9
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 2.4e-142 510.0 565 46.5
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 4.0e-142 509.2 563 46.7
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 6.9e-142 508.4 549 49.2
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 9.0e-142 508.1 565 46.2
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 1.2e-141 507.7 551 47.2
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 2.6e-141 506.5 547 47.5
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 1.3e-140 504.2 563 46.2
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 2.9e-140 503.1 562 46.3
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 6.5e-140 501.9 589 45.8
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 6.5e-140 501.9 554 48.2
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 6.5e-140 501.9 563 48.3
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 8.4e-140 501.5 560 46.2
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 8.4e-140 501.5 523 50.9
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 2.5e-139 500.0 551 46.1
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 2.5e-139 500.0 554 48.7
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 9.3e-139 498.0 557 47.4
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 1.6e-138 497.3 552 47.1
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 6.0e-138 495.4 552 46.0
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 2.8e-135 486.5 553 47.2
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 4.8e-135 485.7 499 50.9
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 1.8e-134 483.8 651 41.2
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 1.8e-134 483.8 496 50.4
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.4e-134 483.4 511 50.3
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 9.0e-134 481.5 553 47.2
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 2.2e-132 476.9 505 48.1
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 2.9e-132 476.5 499 49.3
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 1.4e-131 474.2 503 47.7
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 5.5e-131 472.2 543 46.2
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.2e-130 471.1 551 47.4
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 7.9e-130 468.4 485 49.5
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 1.0e-129 468.0 552 47.5
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 1.9e-128 463.8 569 44.3
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.5e-128 463.4 660 39.1
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 4.3e-128 462.6 513 48.5
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 1.4e-126 457.6 552 44.2
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 2.4e-126 456.8 566 43.6
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 9.1e-126 454.9 548 45.4
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 4.5e-125 452.6 491 48.5
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 2.6e-120 436.8 640 39.7
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.3e-120 436.4 442 50.0
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 1.7e-119 434.1 566 42.6
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.2e-117 427.9 359 57.7
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.3e-116 424.5 341 59.2
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 1.3e-116 424.5 346 57.5
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 5.5e-107 392.5 415 48.9
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.7e-106 390.2 472 45.1
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 4.7e-106 389.4 457 45.1
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 1.0e-105 388.3 464 45.5
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 1.4e-105 387.9 459 46.2
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 1.5e-104 384.4 482 44.6
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 2.2e-100 370.5 438 45.4
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 1.5e-96 357.8 442 44.8
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 2.0e-96 357.5 444 44.6
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 8.3e-95 352.1 467 40.9
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 1.2e-93 348.2 438 43.8
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 2.7e-93 347.1 436 44.3
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 3.7e-87 326.6 450 41.1
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 1.1e-86 325.1 407 42.8
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 2.5e-83 313.9 380 43.2
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 6.8e-81 305.8 517 37.3
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 1.3e-79 301.6 273 53.8
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.0e-76 292.0 417 39.6
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 4.7e-74 283.1 557 34.5
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 1.5e-64 251.5 278 46.4
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 2.2e-63 247.7 613 31.2
PRCOL_00006066 Prasinoderma coloniale HOM05D000173 ORTHO05D004400 7.1e-54 216.1 339 39.2
QL02p041683 Quercus lobata HOM05D002451 ORTHO05D007901 1.9e-51 208.0 138 65.9
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 9.0e-49 199.1 263 44.9
SGA_v2.0_scaffold19G08729 Striga asiatica HOM05D002451 ORTHO05D007901 1.5e-48 198.4 129 67.4
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 6.4e-47 193.0 137 65.0
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 9.6e-43 179.1 290 38.6
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 8.1e-42 176.0 458 30.8
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 2.6e-40 171.0 150 50.0
Nitab4.5_0000566g0090 Nicotiana tabacum HOM05D002451 ORTHO05D007901 5.3e-33 146.7 91 71.4
Cpa.g.sc40.100 Carica papaya HOM05D002451 ORTHO05D007901 7.1e-30 136.3 87 67.8
unitig_46.g18400 Utricularia gibba HOM05D002451 ORTHO05D007901 1.3e-28 132.1 98 62.2
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 1.0e-23 115.9 136 49.3
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 9.3e-22 109.4 130 43.8
CBR_g41538 Chara braunii HOM05D002451 ORTHO05D007901 3.1e-17 94.4 110 41.8
Nn1g07675 Nelumbo nucifera HOM05D002451 ORTHO05D007901 6.9e-17 93.2 103 46.6
TAR636G3106 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.7e-10 72.0 44 63.6
Ciclev10010851m.g Citrus clementina HOM05D002451 ORTHO05D007901 2.6e-08 64.7 69 46.4


User provided reference genes

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