Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 1.8e-190 669.1 334 100.0
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.1e-62 244.6 254 52.4
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 9.2e-54 214.9 237 49.4
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 5.2e-49 199.1 281 40.2
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.4e-48 196.4 238 45.4
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 9.9e-48 194.9 246 44.3
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 2.2e-47 193.7 242 44.6
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 2.2e-47 193.7 242 43.0
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 4.9e-47 192.6 237 44.3
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 6.4e-47 192.2 234 43.6
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 6.4e-47 192.2 240 42.1
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 6.4e-47 192.2 244 43.9
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 8.4e-47 191.8 256 42.2
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.1e-46 191.4 237 45.1
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 1.9e-46 190.7 239 42.3
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 3.2e-46 189.9 241 40.7
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 3.2e-46 189.9 230 42.2
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.2e-46 189.9 266 42.1
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 4.2e-46 189.5 237 43.9
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 4.2e-46 189.5 233 42.1
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 5.4e-46 189.1 246 41.9
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 5.4e-46 189.1 242 43.0
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 5.4e-46 189.1 240 43.8
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.4e-46 189.1 240 43.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 7.1e-46 188.7 237 43.5
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 7.1e-46 188.7 240 42.9
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 9.3e-46 188.3 240 43.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.6e-45 187.6 243 42.8
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 1.6e-45 187.6 232 42.2
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.1e-45 187.2 240 43.8
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 2.1e-45 187.2 300 36.3
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.7e-45 186.8 242 42.1
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 2.7e-45 186.8 234 43.2
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 3.5e-45 186.4 240 43.8
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 6.0e-45 185.7 291 38.1
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 6.0e-45 185.7 239 40.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.0e-45 185.7 243 44.0
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 6.0e-45 185.7 242 43.4
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 7.8e-45 185.3 256 41.8
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 7.8e-45 185.3 241 44.0
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.0e-44 184.9 242 42.6
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.0e-44 184.9 242 42.1
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 1.7e-44 184.1 241 42.3
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 1.7e-44 184.1 238 42.0
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.7e-44 184.1 235 42.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.7e-44 184.1 234 45.7
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 2.3e-44 183.7 243 41.2
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 2.3e-44 183.7 243 41.2
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.3e-44 183.7 229 43.2
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 2.3e-44 183.7 238 42.9
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 3.0e-44 183.3 243 40.7
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 3.0e-44 183.3 283 37.8
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 3.9e-44 183.0 243 40.7
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 3.9e-44 183.0 243 42.0
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.9e-44 183.0 232 42.7
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 3.9e-44 183.0 240 41.7
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 5.1e-44 182.6 244 41.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 5.1e-44 182.6 241 42.3
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 5.1e-44 182.6 312 36.5
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 8.7e-44 181.8 327 37.0
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 8.7e-44 181.8 240 42.9
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 8.7e-44 181.8 240 41.7
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 8.7e-44 181.8 235 43.4
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.9e-43 180.6 250 39.6
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.5e-43 180.3 215 45.6
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.5e-43 180.3 280 39.6
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.5e-43 180.3 241 39.8
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 3.3e-43 179.9 230 43.0
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.3e-43 179.9 244 39.8
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.3e-43 179.9 230 43.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 3.3e-43 179.9 279 39.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 4.3e-43 179.5 248 39.9
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.3e-43 179.5 240 43.3
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.3e-43 179.5 249 39.4
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.6e-43 179.1 266 40.6
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 7.3e-43 178.7 233 43.3
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 7.3e-43 178.7 278 37.8
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 2.1e-42 177.2 237 40.5
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 6.2e-42 175.6 235 42.1
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 6.2e-42 175.6 240 41.2
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.4e-41 174.5 229 41.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 2.4e-41 173.7 249 39.8
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.4e-41 173.7 239 43.5
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 2.4e-41 173.7 229 42.4
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 3.1e-41 173.3 246 39.4
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 3.1e-41 173.3 237 40.5
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 9.0e-41 171.8 241 40.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.0e-41 171.8 234 43.6
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.5e-40 171.0 230 41.3
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 2.0e-40 170.6 237 40.1
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 3.4e-40 169.9 248 39.1
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.8e-40 169.1 238 40.8
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 5.8e-40 169.1 238 40.8
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 7.6e-40 168.7 244 39.8
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.3e-39 167.9 204 43.6
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.7e-39 167.5 228 39.5
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 2.2e-39 167.2 233 39.9
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 4.9e-39 166.0 268 37.7
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 2.4e-38 163.7 229 41.9
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 4.2e-38 162.9 234 43.2
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 5.4e-38 162.5 229 43.2
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 4.6e-37 159.5 266 41.7
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.3e-36 157.1 231 40.3
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 5.6e-35 152.5 349 31.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 4.8e-34 149.4 199 40.7
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 5.8e-32 142.5 145 48.3
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 1.4e-30 137.9 199 42.2
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 1.2e-29 134.8 231 36.4
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 2.6e-24 117.1 146 41.1
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.9e-23 113.6 160 41.2
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.4e-22 111.3 137 40.1
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 2.5e-22 110.5 125 44.0
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.2e-22 110.2 137 40.9
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 5.5e-22 109.4 142 42.3
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 9.3e-22 108.6 135 40.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 3.3e-19 100.1 148 35.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.8e-15 86.7 121 43.8
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 7.2e-14 82.4 106 45.3
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.2e-13 81.6 105 43.8
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-12 78.2 97 42.3
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.8e-12 77.8 108 38.0
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 2.5e-11 73.9 111 40.5


User provided reference genes

Program Settings