Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0208 Marchantia polymorpha HOM05D001372 ORTHO05D007311 8.5e-47 189.9 89 100.0
HanXRQChr03g0074331 Helianthus annuus HOM05D001372 ORTHO05D007311 7.2e-30 133.7 86 72.1
Ciclev10030268m.g Citrus clementina HOM05D001372 ORTHO05D007311 9.4e-30 133.3 86 70.9
Manes.15G145700 Manihot esculenta HOM05D001372 ORTHO05D007311 2.1e-29 132.1 86 68.6
Duzib052G0457 Durio zibethinus HOM05D001372 ORTHO05D007311 2.7e-29 131.7 89 69.7
Duzib132G0052 Durio zibethinus HOM05D001372 ORTHO05D007311 2.7e-29 131.7 89 70.8
Cc02_g18240 Coffea canephora HOM05D001372 ORTHO05D007311 6.1e-29 130.6 86 67.4
Oeu010568.1 Olea europaea HOM05D001372 ORTHO05D007311 8.0e-29 130.2 86 68.6
Sc14g0001710 Simmondsia chinensis HOM05D001372 ORTHO05D007311 8.0e-29 130.2 86 68.6
unitig_60.g25449 Utricularia gibba HOM05D001372 ORTHO05D007311 8.0e-29 130.2 86 68.6
Gohir.D12G042200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.0e-28 129.8 89 69.7
Gorai.008G044200 Gossypium raimondii HOM05D001372 ORTHO05D007311 1.0e-28 129.8 89 69.7
SalBow5G1173 Salvia bowleyana HOM05D001372 ORTHO05D007311 1.4e-28 129.4 86 67.4
vmacro02159 Vaccinium macrocarpon HOM05D001193 ORTHO05D007311 1.4e-28 129.4 84 71.4
COL.COLO4_17203 Corchorus olitorius HOM05D001372 ORTHO05D007311 1.8e-28 129.0 73 78.1
COL.COLO4_17775 Corchorus olitorius HOM05D001372 ORTHO05D007311 1.8e-28 129.0 75 77.3
Lsat_1_v5_gn_9_109081 Lactuca sativa HOM05D001372 ORTHO05D007311 1.8e-28 129.0 86 69.8
TWI38G1937 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 1.8e-28 129.0 86 68.6
Manes.17G096600 Manihot esculenta HOM05D001372 ORTHO05D007311 2.3e-28 128.6 86 66.3
Pp3c17_11290 Physcomitrium patens HOM05D001372 ORTHO05D007311 2.3e-28 128.6 64 85.9
SalBow3G1216 Salvia bowleyana HOM05D001372 ORTHO05D007311 2.3e-28 128.6 86 67.4
Thecc.02G028600 Theobroma cacao HOM05D001372 ORTHO05D007311 2.3e-28 128.6 75 76.0
CAN.G134.164 Capsicum annuum HOM05D001372 ORTHO05D007311 3.0e-28 128.3 86 69.8
CiPaw.05G058700 Carya illinoinensis HOM05D001372 ORTHO05D007311 3.0e-28 128.3 87 69.0
Glyma.11G123600 Glycine max HOM05D001372 ORTHO05D007311 3.0e-28 128.3 86 66.3
MD10G1086600 Malus domestica HOM05D001372 ORTHO05D007311 3.0e-28 128.3 86 68.6
Cre16.g653850 Chlamydomonas reinhardtii HOM05D001372 ORTHO05D007311 6.7e-28 127.1 88 64.8
Dinv28822 Davidia involucrata HOM05D001372 ORTHO05D007311 6.7e-28 127.1 87 71.3
Os06g0661600 Oryza sativa ssp. japonica HOM05D001372 ORTHO05D007311 6.7e-28 127.1 88 64.8
Peaxi162Scf00016g00132 Petunia axillaris HOM05D001372 ORTHO05D007311 6.7e-28 127.1 86 67.4
Prupe.8G112600 Prunus persica HOM05D001372 ORTHO05D007311 6.7e-28 127.1 86 68.6
Solyc01g109070.2 Solanum lycopersicum HOM05D001372 ORTHO05D007311 6.7e-28 127.1 86 69.8
Sopen01g051270 Solanum pennellii HOM05D001372 ORTHO05D007311 6.7e-28 127.1 86 69.8
Migut.N01213 Erythranthe guttata HOM05D001372 ORTHO05D007311 8.8e-28 126.7 89 66.3
Glyma.12G048200 Glycine max HOM05D001372 ORTHO05D007311 8.8e-28 126.7 86 65.1
THA.LOC104807341 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 8.8e-28 126.7 86 67.4
CAN.G322.87 Capsicum annuum HOM05D001372 ORTHO05D007311 1.2e-27 126.3 86 68.6
Cfa004947 Carpinus fangiana HOM05D001372 ORTHO05D007311 1.2e-27 126.3 86 68.6
MELO3C018416.2 Cucumis melo HOM05D001372 ORTHO05D007311 1.2e-27 126.3 86 65.1
Gohir.A09G221800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.2e-27 126.3 89 68.5
Lj3g0024398 Lotus japonicus HOM05D001372 ORTHO05D007311 1.2e-27 126.3 86 66.3
Potri.009G109100 Populus trichocarpa HOM05D001372 ORTHO05D007311 1.2e-27 126.3 86 67.4
CANSAT80G1477 Cannabis sativa HOM05D001372 ORTHO05D007311 1.5e-27 125.9 86 67.4
AUR62025645 Chenopodium quinoa HOM05D001372 ORTHO05D007311 1.5e-27 125.9 86 67.4
Eucgr.F03329 Eucalyptus grandis HOM05D001372 ORTHO05D007311 1.5e-27 125.9 86 66.3
Gohir.A12G030200 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.5e-27 125.9 89 67.4
Hma1.2p1_0584F.1_g183260 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 1.5e-27 125.9 86 66.3
Medtr4g068370 Medicago truncatula HOM05D001372 ORTHO05D007311 1.5e-27 125.9 86 66.3
Rhsim11G0170800 Rhododendron simsii HOM05D001193 ORTHO05D007311 1.5e-27 125.9 84 69.0
RcHm_v2.0_Chr6g0260171 Rosa chinensis HOM05D001372 ORTHO05D007311 1.5e-27 125.9 75 74.7
RcHm_v2.0_Chr6g0260511 Rosa chinensis HOM05D001372 ORTHO05D007311 1.5e-27 125.9 75 74.7
ATR0807G173 Amborella trichopoda HOM05D001372 ORTHO05D007311 2.0e-27 125.6 89 65.2
PGR042G3549 Punica granatum HOM05D001372 ORTHO05D007311 2.0e-27 125.6 72 75.0
Sabra09G0083300 Salix brachista HOM05D001372 ORTHO05D007311 2.0e-27 125.6 86 66.3
CDE07G0396 Ceratophyllum demersum HOM05D001372 ORTHO05D007311 2.6e-27 125.2 92 67.4
Haze_02464 Corylus avellana HOM05D001372 ORTHO05D007311 2.6e-27 125.2 86 68.6
FAN26G1996 Fragaria x ananassa HOM05D001372 ORTHO05D007311 2.6e-27 125.2 75 74.7
Oeu003708.1 Olea europaea HOM05D001372 ORTHO05D007311 2.6e-27 125.2 83 67.5
Atru.chr13.1402 Acer truncatum HOM05D001372 ORTHO05D007311 3.3e-27 124.8 86 65.1
BcaC01g03046 Brassica carinata HOM05D001372 ORTHO05D007311 3.3e-27 124.8 90 65.6
Cpa.g.sc62.81 Carica papaya HOM05D001372 ORTHO05D007311 3.3e-27 124.8 86 66.3
Ca_20817_v3 Cicer arietinum L. HOM05D001372 ORTHO05D007311 3.3e-27 124.8 86 64.0
Hma1.2p1_1353F.1_g277710 Hydrangea macrophylla HOM05D001372 ORTHO05D007311 3.3e-27 124.8 87 69.0
AUR62021787 Chenopodium quinoa HOM05D001372 ORTHO05D007311 4.4e-27 124.4 86 66.3
Haze_02462 Corylus avellana HOM05D001372 ORTHO05D007311 4.4e-27 124.4 84 70.2
FAN19G1239 Fragaria x ananassa HOM05D001372 ORTHO05D007311 4.4e-27 124.4 88 65.9
RcHm_v2.0_Chr6g0260771 Rosa chinensis HOM05D001372 ORTHO05D007311 4.4e-27 124.4 66 80.3
TWI38G0580 Tripterygium wilfordii HOM05D001372 ORTHO05D007311 4.4e-27 124.4 86 65.1
A03p45650 Brassica napus HOM05D001372 ORTHO05D002010 5.7e-27 124.0 77 68.8
AUR62008308 Chenopodium quinoa HOM05D001372 ORTHO05D007311 5.7e-27 124.0 86 65.1
AUR62008309 Chenopodium quinoa HOM05D001372 ORTHO05D007311 5.7e-27 124.0 86 65.1
DCAR_022076 Daucus carota HOM05D001372 ORTHO05D007311 5.7e-27 124.0 86 65.1
Psat1g039160 Pisum sativum HOM05D001372 ORTHO05D007311 5.7e-27 124.0 89 66.3
RcHm_v2.0_Chr6g0260501 Rosa chinensis HOM05D001372 ORTHO05D007311 5.7e-27 124.0 75 74.7
Lalb_Chr01g0002991 Lupinus albus HOM05D001372 ORTHO05D007311 7.5e-27 123.6 64 81.2
Nn2g15585 Nelumbo nucifera HOM05D001372 ORTHO05D007311 7.5e-27 123.6 86 65.1
Phvul.011G050400 Phaseolus vulgaris HOM05D001372 ORTHO05D007311 7.5e-27 123.6 86 64.0
arahy.Tifrunner.gnm1.ann1.34YEZP Arachis hypogaea HOM05D001372 ORTHO05D007311 9.7e-27 123.2 86 65.1
arahy.Tifrunner.gnm1.ann1.FTA1AJ Arachis hypogaea HOM05D001372 ORTHO05D007311 9.7e-27 123.2 64 82.8
ClCG02G005510 Citrullus lanatus HOM05D001372 ORTHO05D007311 9.7e-27 123.2 82 68.3
CsaV3_7G010120 Cucumis sativus L. HOM05D001372 ORTHO05D007311 9.7e-27 123.2 86 62.8
Aa31LG8G13440 Aethionema arabicum HOM05D001372 ORTHO05D007311 1.3e-26 122.9 77 68.8
Ah.02g112890 Amaranthus hybridus HOM05D001372 ORTHO05D007311 1.3e-26 122.9 86 64.0
Ah.02g112920 Amaranthus hybridus HOM05D001372 ORTHO05D007311 1.3e-26 122.9 86 64.0
Aqoxy230s002 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 1.3e-26 122.9 78 70.5
Aqoxy4G03213 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 1.3e-26 122.9 78 70.5
EL10Ac5g10871 Beta vulgaris HOM05D001372 ORTHO05D007311 1.7e-26 122.5 75 69.3
BcaB08g34618 Brassica carinata HOM05D001372 ORTHO05D007311 1.7e-26 122.5 71 73.2
CSS0001418 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.7e-26 122.5 86 66.3
CSS0020019 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.7e-26 122.5 86 66.3
Carub.0003s2981 Capsella rubella HOM05D001372 ORTHO05D007311 1.7e-26 122.5 87 63.2
CARHR106260 Cardamine hirsuta HOM05D001372 ORTHO05D007311 1.7e-26 122.5 86 64.0
FAN28G0653 Fragaria x ananassa HOM05D001372 ORTHO05D007311 1.7e-26 122.5 75 72.0
FAN28G0897 Fragaria x ananassa HOM05D001372 ORTHO05D007311 1.7e-26 122.5 75 72.0
Medtr0311s0010 Medicago truncatula HOM05D001372 ORTHO05D007311 1.7e-26 122.5 86 64.0
TPR.G10235 Trifolium pratense HOM05D001372 ORTHO05D007311 1.7e-26 122.5 86 64.0
AagrBONN_evm.TU.Sc2ySwM_344.4003 Anthoceros agrestis HOM05D001372 ORTHO05D007311 2.2e-26 122.1 62 83.9
C03p56710 Brassica napus HOM05D001372 ORTHO05D002010 2.2e-26 122.1 76 68.4
BolC3t17955H Brassica oleracea HOM05D001372 ORTHO05D002010 2.2e-26 122.1 76 68.4
QL11p039238 Quercus lobata HOM05D001372 ORTHO05D007311 2.2e-26 122.1 70 77.1
THA.LOC104819597 Tarenaya hassleriana HOM05D001372 ORTHO05D007311 2.2e-26 122.1 86 67.4
BraA03t13697Z Brassica rapa HOM05D001372 ORTHO05D002010 2.8e-26 121.7 73 71.2
Aqoxy6G00480 Aquilegia oxysepala HOM05D001372 ORTHO05D007311 3.7e-26 121.3 86 65.1
AT2G15910 Arabidopsis thaliana HOM05D001372 ORTHO05D002010 3.7e-26 121.3 77 67.5
Thhalv10023083m.g Eutrema salsugineum HOM05D001372 ORTHO05D002010 3.7e-26 121.3 84 65.5
Sed0000118 Sechium edule HOM05D001372 ORTHO05D007311 3.7e-26 121.3 86 62.8
Zm00001eb389160 Zea mays HOM05D001372 ORTHO05D007311 3.7e-26 121.3 88 62.5
AL3G47750 Arabidopsis lyrata HOM05D001372 ORTHO05D002010 4.8e-26 120.9 71 71.8
BcaB03g16342 Brassica carinata HOM05D001372 ORTHO05D007311 4.8e-26 120.9 71 71.8
BcaC06g36100 Brassica carinata HOM05D001372 ORTHO05D007311 4.8e-26 120.9 71 71.8
A07p04870 Brassica napus HOM05D001372 ORTHO05D007311 4.8e-26 120.9 73 72.6
C07p07850 Brassica napus HOM05D001372 ORTHO05D007311 4.8e-26 120.9 71 71.8
BolC7t41203H Brassica oleracea HOM05D001372 ORTHO05D007311 4.8e-26 120.9 71 71.8
BraA07t28279Z Brassica rapa HOM05D001372 ORTHO05D007311 4.8e-26 120.9 73 72.6
CDE09G1189 Ceratophyllum demersum HOM05D001455 ORTHO05D001587 4.8e-26 120.9 89 65.2
Nitab4.5_0008194g0080 Nicotiana tabacum HOM05D001372 ORTHO05D007311 6.3e-26 120.6 68 76.5
Psat5g239440 Pisum sativum HOM05D001372 ORTHO05D007311 6.3e-26 120.6 63 81.0
Psat5g295360 Pisum sativum HOM05D001372 ORTHO05D007311 6.3e-26 120.6 63 81.0
Sp3g29230 Schrenkiella parvula HOM05D001372 ORTHO05D007311 6.3e-26 120.6 71 73.2
Eucgr.G00508 Eucalyptus grandis HOM05D001372 ORTHO05D007311 8.3e-26 120.2 86 64.0
Ah.11g045560 Amaranthus hybridus HOM05D001372 ORTHO05D007311 1.8e-25 119.0 86 61.6
HPP92_025391 Vanilla planifolia HOM05D001372 ORTHO05D007311 1.8e-25 119.0 73 74.0
SMO111G0193 Selaginella moellendorffii HOM05D001372 ORTHO05D007311 2.4e-25 118.6 58 87.9
Eucgr.G01534 Eucalyptus grandis HOM05D001372 ORTHO05D007311 3.1e-25 118.2 86 62.8
Nitab4.5_0004946g0010 Nicotiana tabacum HOM05D001372 ORTHO05D007311 5.3e-25 117.5 74 71.6
CSS0021822 Camellia sinensis var. sinensis HOM05D001372 ORTHO05D007311 1.2e-24 116.3 86 60.5
Gorai.006G245400 Gossypium raimondii HOM05D001372 ORTHO05D007311 1.2e-24 116.3 89 65.2
Nn7g36402 Nelumbo nucifera HOM05D001372 ORTHO05D007311 1.2e-24 116.3 86 64.0
Psat2g085760 Pisum sativum HOM05D001372 ORTHO05D007311 3.5e-24 114.8 86 60.5
Atru.chr5.2877 Acer truncatum HOM05D001372 ORTHO05D007311 1.3e-23 112.8 85 61.2
arahy.Tifrunner.gnm1.ann1.YI8NBA Arachis hypogaea HOM05D018927 ORTHO05D003639 1.5e-22 109.4 65 75.4
Gohir.A04G115800 Gossypium hirsutum HOM05D001372 ORTHO05D007311 1.5e-22 109.4 79 65.8
MCO08G009 Micromonas commoda HOM05D001372 ORTHO05D007311 4.7e-21 104.4 63 65.1
Lsat_1_v5_gn_2_32760 Lactuca sativa HOM05D001372 ORTHO05D007311 2.3e-20 102.1 67 70.1
Zm00001eb274880 Zea mays HOM05D001372 ORTHO05D007311 3.0e-20 101.7 54 75.9
Nitab4.5_0001401g0190 Nicotiana tabacum HOM05D001372 ORTHO05D007311 5.2e-20 100.9 51 82.4
SHI05448 Sapria himalayana HOM05D001372 ORTHO05D007311 1.5e-19 99.4 69 62.3
HanXRQChr07g0193971 Helianthus annuus HOM05D001372 ORTHO05D007311 1.3e-18 96.3 57 71.9
RcHm_v2.0_Chr6g0259971 Rosa chinensis HOM05D001372 ORTHO05D007311 1.7e-15 85.9 53 71.7
PRCOL_00006747 Prasinoderma coloniale HOM05D001372 ORTHO05D007311 2.3e-15 85.5 59 57.6
Cc02_g18230 Coffea canephora HOM05D001372 ORTHO05D007311 3.6e-13 78.2 45 71.1


User provided reference genes

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