Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 1.0e-134 483.4 249 100.0
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 5.6e-56 221.9 232 53.4
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 7.9e-34 148.3 243 42.8
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 3.9e-33 146.0 121 60.3
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 3.9e-33 146.0 116 62.9
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 5.1e-33 145.6 121 60.3
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 1.5e-32 144.1 116 62.9
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.5e-32 144.1 116 62.9
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 1.5e-32 144.1 171 47.4
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.9e-32 143.7 112 61.6
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 1.9e-32 143.7 172 49.4
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 2.5e-32 143.3 128 58.6
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 2.5e-32 143.3 106 66.0
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 3.3e-32 142.9 171 50.9
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.3e-32 142.5 106 66.0
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 5.7e-32 142.1 114 62.3
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 5.7e-32 142.1 114 62.3
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 7.4e-32 141.7 116 60.3
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 9.7e-32 141.4 180 47.8
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.3e-31 141.0 180 47.8
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.3e-31 141.0 165 50.3
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 1.3e-31 141.0 126 57.9
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 1.3e-31 141.0 171 47.4
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 1.7e-31 140.6 106 66.0
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.7e-31 140.6 116 59.5
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 1.7e-31 140.6 124 58.9
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 2.2e-31 140.2 163 47.9
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.8e-31 139.8 180 47.2
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 3.7e-31 139.4 104 65.4
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 3.7e-31 139.4 156 51.9
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 3.7e-31 139.4 171 48.5
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 3.7e-31 139.4 104 65.4
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 3.7e-31 139.4 115 61.7
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 3.7e-31 139.4 125 61.6
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 4.8e-31 139.0 104 66.3
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 4.8e-31 139.0 116 61.2
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 4.8e-31 139.0 116 58.6
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 6.3e-31 138.7 106 65.1
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 6.3e-31 138.7 180 45.6
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 6.3e-31 138.7 101 67.3
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 8.2e-31 138.3 172 47.7
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 8.2e-31 138.3 180 47.8
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 8.2e-31 138.3 126 57.1
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 1.1e-30 137.9 104 64.4
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 1.1e-30 137.9 116 58.6
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 1.1e-30 137.9 171 48.0
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 1.4e-30 137.5 171 49.1
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 1.4e-30 137.5 124 58.1
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 1.4e-30 137.5 116 58.6
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 1.4e-30 137.5 171 46.2
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 1.4e-30 137.5 104 64.4
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 2.4e-30 136.7 172 47.7
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 3.1e-30 136.3 104 63.5
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 3.1e-30 136.3 171 48.5
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 3.1e-30 136.3 126 56.3
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 4.1e-30 136.0 193 45.1
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.3e-30 135.6 180 46.1
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 5.3e-30 135.6 126 54.8
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 5.3e-30 135.6 115 60.9
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 5.3e-30 135.6 101 67.3
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 5.3e-30 135.6 101 67.3
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 5.3e-30 135.6 177 46.3
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 1.2e-29 134.4 123 57.7
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 1.2e-29 134.4 159 48.4
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 1.2e-29 134.4 113 61.1
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 1.5e-29 134.0 104 60.6
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 2.0e-29 133.7 104 62.5
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 2.0e-29 133.7 169 47.3
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 2.6e-29 133.3 112 58.0
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.6e-29 133.3 113 58.4
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 3.4e-29 132.9 153 50.3
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 3.4e-29 132.9 102 63.7
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 3.4e-29 132.9 113 59.3
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 4.5e-29 132.5 171 46.2
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 4.5e-29 132.5 101 64.4
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 4.5e-29 132.5 101 63.4
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 4.5e-29 132.5 126 55.6
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 4.5e-29 132.5 104 63.5
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 5.9e-29 132.1 101 63.4
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 5.9e-29 132.1 101 63.4
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 5.9e-29 132.1 109 59.6
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 5.9e-29 132.1 109 59.6
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 5.9e-29 132.1 109 59.6
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 5.9e-29 132.1 156 50.0
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 1.0e-28 131.3 153 48.4
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 1.0e-28 131.3 101 62.4
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 1.3e-28 131.0 153 48.4
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 1.7e-28 130.6 101 62.4
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 1.7e-28 130.6 101 62.4
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 1.7e-28 130.6 101 62.4
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 1.7e-28 130.6 101 62.4
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.7e-28 130.6 168 47.6
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 1.7e-28 130.6 104 62.5
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.2e-28 130.2 101 62.4
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 2.2e-28 130.2 116 57.8
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 2.9e-28 129.8 116 58.6
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 2.9e-28 129.8 172 45.9
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 3.8e-28 129.4 104 62.5
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 3.8e-28 129.4 101 62.4
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 5.0e-28 129.0 109 58.7
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 6.5e-28 128.6 191 42.9
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 8.5e-28 128.3 173 41.0
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.4e-27 127.5 101 61.4
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 1.9e-27 127.1 101 60.4
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 2.5e-27 126.7 104 57.7
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 4.2e-27 125.9 179 44.7
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 5.5e-27 125.6 153 47.1
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 7.2e-27 125.2 188 43.1
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.2e-26 124.4 113 54.9
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 4.2e-19 99.4 71 66.2
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 4.2e-19 99.4 138 45.7
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 1.5e-16 90.9 84 53.6
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 1.8e-14 84.0 99 44.4
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.2e-12 77.0 83 49.4
PRCOL_00003227 Prasinoderma coloniale HOM05D003094 ORTHO05D003482 7.5e-08 62.0 99 36.4
Oeu010083.1 Olea europaea HOM05D003094 ORTHO05D003482 9.7e-08 61.6 49 63.3


User provided reference genes

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