Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 7.6e-192 673.7 351 100.0
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.5e-62 244.2 303 41.9
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 4.5e-43 179.5 214 43.5
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.7e-37 161.0 338 29.9
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.7e-37 159.8 301 31.6
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 6.3e-37 159.1 309 31.4
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 1.1e-36 158.3 301 31.2
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 1.1e-36 158.3 321 30.2
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 1.8e-36 157.5 328 30.8
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 2.4e-36 157.1 301 31.6
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 4.1e-36 156.4 303 30.7
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 5.4e-36 156.0 305 31.8
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 5.4e-36 156.0 323 30.7
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 7.0e-36 155.6 304 31.6
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 7.0e-36 155.6 321 31.5
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.2e-35 154.8 340 28.5
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 2.7e-35 153.7 340 28.5
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 2.7e-35 153.7 295 32.9
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 4.5e-35 152.9 296 31.8
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 5.9e-35 152.5 304 30.3
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 5.9e-35 152.5 304 30.3
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 5.9e-35 152.5 312 30.4
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 5.9e-35 152.5 325 29.2
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 7.7e-35 152.1 330 28.8
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 7.7e-35 152.1 333 30.6
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.3e-34 151.4 304 30.6
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 1.3e-34 151.4 323 30.7
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.3e-34 151.4 304 31.6
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 1.3e-34 151.4 314 29.3
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 1.7e-34 151.0 330 29.4
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 1.7e-34 151.0 310 31.6
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 2.2e-34 150.6 304 29.9
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 2.2e-34 150.6 304 29.9
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 2.2e-34 150.6 304 29.9
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.2e-34 150.6 321 28.7
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 2.9e-34 150.2 294 31.0
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 2.9e-34 150.2 300 31.3
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 2.9e-34 150.2 310 31.6
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 3.8e-34 149.8 324 28.1
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 3.8e-34 149.8 322 29.5
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 5.0e-34 149.4 342 31.0
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 5.0e-34 149.4 302 30.1
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 5.0e-34 149.4 347 30.3
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 6.5e-34 149.1 322 28.9
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.1e-33 148.3 350 28.0
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.9e-33 147.5 335 30.1
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 1.9e-33 147.5 323 29.4
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 1.9e-33 147.5 304 28.3
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 1.9e-33 147.5 302 29.1
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.5e-33 147.1 303 29.0
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 2.5e-33 147.1 312 28.5
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 3.2e-33 146.7 304 28.6
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 3.2e-33 146.7 304 28.9
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 4.2e-33 146.4 320 29.1
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 5.5e-33 146.0 302 31.8
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 5.5e-33 146.0 320 31.2
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 5.5e-33 146.0 313 29.1
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 5.5e-33 146.0 329 28.9
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 7.2e-33 145.6 336 27.4
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 7.2e-33 145.6 316 30.7
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 9.4e-33 145.2 314 29.3
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 9.4e-33 145.2 296 29.4
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 1.2e-32 144.8 320 29.1
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 1.6e-32 144.4 351 27.1
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 2.1e-32 144.1 321 29.0
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 2.1e-32 144.1 317 29.3
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 3.6e-32 143.3 334 27.5
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.6e-32 143.3 320 28.1
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 3.6e-32 143.3 320 28.1
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 4.7e-32 142.9 340 27.9
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 4.7e-32 142.9 335 29.3
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 6.1e-32 142.5 314 29.0
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 8.0e-32 142.1 302 28.5
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 8.0e-32 142.1 310 27.7
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 1.4e-31 141.4 328 27.1
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.4e-31 141.4 320 28.4
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 3.0e-31 140.2 336 27.7
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 3.0e-31 140.2 333 30.0
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 4.0e-31 139.8 311 30.2
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 4.0e-31 139.8 300 28.3
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.2e-31 139.4 327 29.1
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 8.8e-31 138.7 318 28.6
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 2.0e-30 137.5 294 30.3
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 2.0e-30 137.5 303 28.4
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 3.4e-30 136.7 309 28.8
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 5.7e-30 136.0 310 30.0
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 7.5e-30 135.6 304 28.9
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 7.5e-30 135.6 314 28.3
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 9.8e-30 135.2 288 28.8
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 9.8e-30 135.2 313 27.5
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 9.8e-30 135.2 314 28.3
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.3e-29 134.8 297 28.6
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 1.7e-29 134.4 331 27.5
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 2.8e-29 133.7 300 31.0
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 2.8e-29 133.7 314 28.3
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 2.8e-29 133.7 316 27.8
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 4.9e-29 132.9 247 29.6
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.8e-28 131.0 314 26.8
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 7.0e-28 129.0 245 31.0
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 2.7e-27 127.1 320 28.8
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.5e-27 126.7 328 27.4
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 4.5e-27 126.3 354 29.4
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 5.9e-27 125.9 314 25.5
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 8.6e-26 122.1 314 25.8
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 1.1e-25 121.7 314 25.8
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 5.6e-25 119.4 308 28.2
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 3.6e-24 116.7 352 25.9
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 4.7e-24 116.3 230 30.9
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 6.1e-24 115.9 227 29.1
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-23 114.8 207 31.4
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.8e-23 114.4 207 28.0
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 7.5e-22 109.0 200 33.5
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 1.4e-20 104.8 198 29.3
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 9.2e-20 102.1 256 27.3
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 2.7e-19 100.5 223 28.3
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 1.3e-18 98.2 330 23.3
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 3.9e-18 96.7 144 36.1
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 6.6e-18 95.9 144 33.3
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 7.3e-17 92.4 252 26.2
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 9.2e-12 75.5 122 33.6
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 3.0e-10 70.5 304 23.0
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 2.5e-09 67.4 177 29.9
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 3.3e-09 67.0 147 32.0
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 1.2e-08 65.1 140 30.7
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 4.4e-06 56.6 62 38.7


User provided reference genes

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