Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0104 Marchantia polymorpha HOM05D004471 ORTHO05D005345 1.2e-95 353.2 177 100.0
Pp3c4_10030 Physcomitrium patens HOM05D004471 ORTHO05D005345 3.3e-74 282.0 174 78.7
SEGI_33381 Sequoiadendron giganteum HOM05D004471 ORTHO05D005345 2.0e-71 272.7 178 75.3
SMO347G0444 Selaginella moellendorffii HOM05D004471 ORTHO05D005345 1.3e-70 270.0 176 73.9
Aqoxy5G00550 Aquilegia oxysepala HOM05D004471 ORTHO05D005345 1.0e-67 260.4 177 68.4
TAR629G0585 Trochodendron aralioides HOM05D004471 ORTHO05D005345 1.1e-66 256.9 176 69.3
EL10Ac4g09248 Beta vulgaris HOM05D004471 ORTHO05D005345 1.5e-66 256.5 177 67.8
Hund07017 Selenicereus undatus HOM05D004471 ORTHO05D005345 3.3e-66 255.4 178 69.7
MELO3C015368.2 Cucumis melo HOM05D004471 ORTHO05D005345 4.3e-66 255.0 178 70.2
TWI56G0886 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 4.3e-66 255.0 177 69.5
Actinidia05746 Actinidia chinensis HOM05D004471 ORTHO05D005345 5.6e-66 254.6 177 68.4
TWI12G0951 Tripterygium wilfordii HOM05D004471 ORTHO05D005345 5.6e-66 254.6 177 68.4
QL03p002667 Quercus lobata HOM05D004471 ORTHO05D005345 7.3e-66 254.2 175 69.1
ClCG03G016550 Citrullus lanatus HOM05D004471 ORTHO05D005345 1.2e-65 253.4 178 69.1
Sed0002921 Sechium edule HOM05D004471 ORTHO05D005345 1.2e-65 253.4 179 69.3
VMungo0540G0886 Vigna mungo HOM05D004471 ORTHO05D005345 2.1e-65 252.7 177 67.2
PSO063G3713 Papaver somniferum HOM05D004471 ORTHO05D005345 2.8e-65 252.3 179 67.6
CSS0025209 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 3.6e-65 251.9 177 66.7
PSO170G4164 Papaver somniferum HOM05D004471 ORTHO05D005345 4.7e-65 251.5 179 68.2
Ca_09388_v3 Cicer arietinum L. HOM05D004471 ORTHO05D005345 6.2e-65 251.1 177 67.2
Os09g0244900 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 6.2e-65 251.1 177 68.4
GSVIVG01021973001 Vitis vinifera HOM05D004471 ORTHO05D005345 6.2e-65 251.1 177 67.2
Glyma.19G240000 Glycine max HOM05D004471 ORTHO05D005345 8.0e-65 250.8 178 68.5
Medtr7g114210 Medicago truncatula HOM05D004471 ORTHO05D005345 8.0e-65 250.8 177 67.2
Sc09g0003490 Simmondsia chinensis HOM05D004471 ORTHO05D005345 8.0e-65 250.8 177 65.5
CiPaw.07G011400 Carya illinoinensis HOM05D004471 ORTHO05D005345 1.1e-64 250.4 177 66.7
Potri.013G031000 Populus trichocarpa HOM05D004471 ORTHO05D005345 1.1e-64 250.4 177 68.4
Glyma.03G242500 Glycine max HOM05D004471 ORTHO05D005345 1.4e-64 250.0 178 68.5
Nitab4.5_0002323g0100 Nicotiana tabacum HOM05D004471 ORTHO05D005345 1.4e-64 250.0 177 68.4
CAN.G617.9 Capsicum annuum HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
Lsat_1_v5_gn_5_112921 Lactuca sativa HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
Nitab4.5_0007843g0010 Nicotiana tabacum HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
PGR031G3800 Punica granatum HOM05D004471 ORTHO05D005345 1.8e-64 249.6 178 66.9
Solyc04g072410.3 Solanum lycopersicum HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
Sopen04g028580 Solanum pennellii HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
PGSC0003DMG400027544 Solanum tuberosum HOM05D004471 ORTHO05D005345 1.8e-64 249.6 177 67.8
Zm00001eb084990 Zea mays HOM05D004471 ORTHO05D005345 1.8e-64 249.6 173 70.5
Dinv26586 Davidia involucrata HOM05D004471 ORTHO05D005345 3.1e-64 248.8 177 66.1
Zm00001eb421350 Zea mays HOM05D004471 ORTHO05D005345 4.0e-64 248.4 173 70.5
THA.LOC104818664 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 5.2e-64 248.1 182 69.2
CARHR079310 Cardamine hirsuta HOM05D004471 ORTHO05D005345 6.8e-64 247.7 177 66.7
Gorai.007G263500 Gossypium raimondii HOM05D004471 ORTHO05D005345 6.8e-64 247.7 177 67.8
CsaV3_1G039430 Cucumis sativus L. HOM05D004471 ORTHO05D005345 8.9e-64 247.3 183 67.8
Gohir.A11G236600 Gossypium hirsutum HOM05D004471 ORTHO05D005345 8.9e-64 247.3 177 67.8
Gohir.D11G247200 Gossypium hirsutum HOM05D004471 ORTHO05D005345 8.9e-64 247.3 177 67.8
Peaxi162Scf00071g00744 Petunia axillaris HOM05D004471 ORTHO05D005345 8.9e-64 247.3 177 66.7
THA.LOC104821699 Tarenaya hassleriana HOM05D004471 ORTHO05D005345 8.9e-64 247.3 177 67.8
Cc02_g32300 Coffea canephora HOM05D004471 ORTHO05D005345 1.2e-63 246.9 177 66.7
Eucgr.B01762 Eucalyptus grandis HOM05D004471 ORTHO05D005345 1.2e-63 246.9 177 67.2
HanXRQChr14g0442561 Helianthus annuus HOM05D004471 ORTHO05D005345 1.2e-63 246.9 177 67.8
Thecc.05G251800 Theobroma cacao HOM05D004471 ORTHO05D005345 1.2e-63 246.9 177 68.9
Carub.0003s0423 Capsella rubella HOM05D004471 ORTHO05D005345 1.5e-63 246.5 180 66.1
Manes.09G160500 Manihot esculenta HOM05D004471 ORTHO05D005345 1.5e-63 246.5 177 68.4
TPR.G6943 Trifolium pratense HOM05D004471 ORTHO05D005345 1.5e-63 246.5 177 66.1
Lj2g0025202 Lotus japonicus HOM05D004471 ORTHO05D005345 2.0e-63 246.1 178 66.9
Hund21668 Selenicereus undatus HOM05D004471 ORTHO05D005345 2.0e-63 246.1 178 66.9
AL3G15090 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 2.6e-63 245.7 180 66.1
AT3G05000 Arabidopsis thaliana HOM05D004471 ORTHO05D005345 2.6e-63 245.7 180 66.1
Duzib177G1077 Durio zibethinus HOM05D004471 ORTHO05D005345 2.6e-63 245.7 177 68.9
Thhalv10021604m.g Eutrema salsugineum HOM05D004471 ORTHO05D005345 2.6e-63 245.7 180 66.1
HanXRQChr03g0072361 Helianthus annuus HOM05D004471 ORTHO05D005345 3.4e-63 245.4 177 66.7
Phvul.006G096500 Phaseolus vulgaris HOM05D004471 ORTHO05D005345 3.4e-63 245.4 177 67.8
MSTRG.11237 Avicennia marina HOM05D004471 ORTHO05D005345 4.4e-63 245.0 177 65.5
CDE06G1925 Ceratophyllum demersum HOM05D004471 ORTHO05D005345 4.4e-63 245.0 178 64.0
Os07g0291100 Oryza sativa ssp. japonica HOM05D004471 ORTHO05D005345 4.4e-63 245.0 177 67.2
SGA_v2.0_scaffold143G35756 Striga asiatica HOM05D004471 ORTHO05D005345 9.8e-63 243.8 177 66.1
Migut.I00591 Erythranthe guttata HOM05D004471 ORTHO05D005345 1.3e-62 243.4 177 65.0
Nn1g09147 Nelumbo nucifera HOM05D004471 ORTHO05D005345 1.3e-62 243.4 179 67.6
Duzib106G0566 Durio zibethinus HOM05D004471 ORTHO05D005345 1.7e-62 243.0 177 67.8
FvH4_6g04260 Fragaria vesca HOM05D004471 ORTHO05D005345 1.7e-62 243.0 176 67.0
FAN05G4093 Fragaria x ananassa HOM05D004471 ORTHO05D005345 1.7e-62 243.0 176 67.0
FAN02G0766 Fragaria x ananassa HOM05D004471 ORTHO05D005345 2.2e-62 242.7 176 67.0
Atru.chr2.617 Acer truncatum HOM05D004471 ORTHO05D005345 2.9e-62 242.3 168 69.0
FAN09G1403 Fragaria x ananassa HOM05D004471 ORTHO05D005345 3.7e-62 241.9 176 67.0
MD12G1229300 Malus domestica HOM05D004471 ORTHO05D005345 3.7e-62 241.9 175 66.3
HanXRQChr10g0301731 Helianthus annuus HOM05D004471 ORTHO05D005345 4.9e-62 241.5 177 66.1
Nn5g28667 Nelumbo nucifera HOM05D004471 ORTHO05D005345 4.9e-62 241.5 175 66.9
MD00G1052700 Malus domestica HOM05D004471 ORTHO05D005345 6.4e-62 241.1 175 65.7
Sp3g03820 Schrenkiella parvula HOM05D004471 ORTHO05D005345 6.4e-62 241.1 180 64.4
Lalb_Chr18g0045321 Lupinus albus HOM05D004471 ORTHO05D005345 8.3e-62 240.7 178 64.0
Lalb_Chr06g0167871 Lupinus albus HOM05D004471 ORTHO05D005345 1.4e-61 240.0 177 62.7
BraA05t22994Z Brassica rapa HOM05D004471 ORTHO05D005345 4.1e-61 238.4 173 67.1
Gohir.A13G100500 Gossypium hirsutum HOM05D004471 ORTHO05D005345 5.4e-61 238.0 177 66.1
Haze_04280 Corylus avellana HOM05D004471 ORTHO05D005345 9.2e-61 237.3 167 67.1
Lalb_Chr02g0148511 Lupinus albus HOM05D004471 ORTHO05D005345 9.2e-61 237.3 177 62.7
BcaC07g40233 Brassica carinata HOM05D004471 ORTHO05D005345 1.2e-60 236.9 173 66.5
A05p42590 Brassica napus HOM05D004471 ORTHO05D005345 1.2e-60 236.9 173 66.5
C05p62270 Brassica napus HOM05D004471 ORTHO05D005345 1.2e-60 236.9 173 66.5
BolC5t34882H Brassica oleracea HOM05D004471 ORTHO05D005345 1.2e-60 236.9 173 66.5
Ah.04g160020 Amaranthus hybridus HOM05D003164 ORTHO05D003575 1.6e-60 236.5 166 66.9
AUR62000928 Chenopodium quinoa HOM05D004471 ORTHO05D005345 1.6e-60 236.5 167 65.9
unitig_744.g24459 Utricularia gibba HOM05D004471 ORTHO05D005345 1.6e-60 236.5 177 63.3
arahy.Tifrunner.gnm1.ann1.9WIB0A Arachis hypogaea HOM05D004471 ORTHO05D005345 2.1e-60 236.1 170 64.1
Rhsim05G0148100 Rhododendron simsii HOM05D004471 ORTHO05D005345 2.1e-60 236.1 173 63.6
Lj9A676G54 Lonicera japonica HOM05D004471 ORTHO05D005345 2.7e-60 235.7 166 69.3
ATR0724G032 Amborella trichopoda HOM05D004471 ORTHO05D005345 4.6e-60 235.0 175 65.7
AUR62005042 Chenopodium quinoa HOM05D004471 ORTHO05D005345 4.6e-60 235.0 168 64.9
DCAR_003298 Daucus carota HOM05D004471 ORTHO05D005345 4.6e-60 235.0 181 64.6
Sabra13G0030200 Salix brachista HOM05D004471 ORTHO05D005345 6.0e-60 234.6 169 67.5
Aa31LG5G15450 Aethionema arabicum HOM05D004471 ORTHO05D005345 7.8e-60 234.2 173 65.3
FAN14G3038 Fragaria x ananassa HOM05D004471 ORTHO05D005345 7.8e-60 234.2 172 65.7
Gohir.D13G104100 Gossypium hirsutum HOM05D004471 ORTHO05D005345 7.8e-60 234.2 172 67.4
Potri.005G044300 Populus trichocarpa HOM05D004471 ORTHO05D005345 7.8e-60 234.2 177 63.3
vmacro19660 Vaccinium macrocarpon HOM05D004471 ORTHO05D005345 7.8e-60 234.2 167 66.5
Manes.08G125300 Manihot esculenta HOM05D004471 ORTHO05D005345 1.0e-59 233.8 177 65.5
Ah.06g192940 Amaranthus hybridus HOM05D004471 ORTHO05D005345 1.3e-59 233.4 166 65.7
Cfa006506 Carpinus fangiana HOM05D004471 ORTHO05D005345 5.1e-59 231.5 161 68.3
Prupe.6G334800 Prunus persica HOM05D004471 ORTHO05D005345 5.1e-59 231.5 169 65.7
SalBow3G0010 Salvia bowleyana HOM05D004471 ORTHO05D005345 6.6e-59 231.1 167 65.3
RcHm_v2.0_Chr3g0452951 Rosa chinensis HOM05D004471 ORTHO05D005345 8.6e-59 230.7 176 64.8
CANSAT54G1584 Cannabis sativa HOM05D004471 ORTHO05D005345 1.1e-58 230.3 178 62.9
Ciclev10002639m.g Citrus clementina HOM05D004471 ORTHO05D005345 1.1e-58 230.3 168 67.3
Oeu053263.1 Olea europaea HOM05D004471 ORTHO05D005345 1.1e-58 230.3 168 65.5
SGA_v2.0_scaffold40G15614 Striga asiatica HOM05D004471 ORTHO05D005345 1.5e-58 229.9 169 64.5
arahy.Tifrunner.gnm1.ann1.HP6SUR Arachis hypogaea HOM05D004471 ORTHO05D005345 1.9e-58 229.6 178 61.8
HPP92_003010 Vanilla planifolia HOM05D004471 ORTHO05D005345 2.5e-58 229.2 180 61.1
FAN05G1097 Fragaria x ananassa HOM05D004471 ORTHO05D005345 5.6e-58 228.0 168 66.1
Oeu041531.1 Olea europaea HOM05D004471 ORTHO05D005345 5.6e-58 228.0 171 62.6
BcaC05g29980 Brassica carinata HOM05D004471 ORTHO05D005345 1.6e-57 226.5 166 66.3
BcaC05g29981 Brassica carinata HOM05D004471 ORTHO05D005345 1.6e-57 226.5 166 66.3
FAN09G1313 Fragaria x ananassa HOM05D004471 ORTHO05D005345 2.1e-57 226.1 168 65.5
arahy.Tifrunner.gnm1.ann1.NV1QRL Arachis hypogaea HOM05D004471 ORTHO05D005345 6.2e-57 224.6 178 60.7
CSS0028112 Camellia sinensis var. sinensis HOM05D004471 ORTHO05D005345 6.2e-57 224.6 154 69.5
SHI18238 Sapria himalayana HOM05D004471 ORTHO05D005345 1.1e-56 223.8 176 61.9
COL.COLO4_36062 Corchorus olitorius HOM05D004471 ORTHO05D005345 1.4e-56 223.4 229 53.7
Sabra05G0041100 Salix brachista HOM05D004471 ORTHO05D005345 4.0e-56 221.9 170 62.4
arahy.Tifrunner.gnm1.ann1.M2LFCZ Arachis hypogaea HOM05D004471 ORTHO05D005345 8.9e-56 220.7 171 60.8
MD12G1230100 Malus domestica HOM05D004471 ORTHO05D005345 8.9e-56 220.7 159 66.7
MBI07_g44660_MAGBIO Magnolia biondii HOM05D004471 ORTHO05D005345 4.4e-55 218.4 155 67.1
HPP92_027546 Vanilla planifolia HOM05D004471 ORTHO05D005345 9.9e-55 217.2 171 60.2
arahy.Tifrunner.gnm1.ann1.MZ802S Arachis hypogaea HOM05D004471 ORTHO05D005345 2.2e-54 216.1 167 61.7
ECA240G0709 Erigeron canadensis HOM05D005412 ORTHO05D006096 3.7e-54 215.3 168 62.5
Cfa006508 Carpinus fangiana HOM05D004471 ORTHO05D005345 1.2e-52 210.3 154 64.3
CBR_g38080 Chara braunii HOM05D004471 ORTHO05D005345 1.5e-47 193.4 191 52.9
DCAR_022266 Daucus carota HOM05D004471 ORTHO05D005345 1.3e-46 190.3 168 54.2
DCAR_030062 Daucus carota HOM05D004471 ORTHO05D005345 8.4e-46 187.6 169 53.8
AL3G15360 Arabidopsis lyrata HOM05D004471 ORTHO05D005345 1.9e-42 176.4 126 66.7
Psat3g008960 Pisum sativum HOM05D004471 ORTHO05D005345 3.3e-42 175.6 123 66.7
Lsat_1_v5_gn_9_110141 Lactuca sativa HOM05D004471 ORTHO05D005345 4.3e-42 175.3 139 61.9
Cc00_g16770 Coffea canephora HOM05D004471 ORTHO05D005345 7.3e-42 174.5 123 66.7
Cc00_g29480 Coffea canephora HOM05D004471 ORTHO05D005345 7.3e-42 174.5 123 66.7
Eucgr.L02626 Eucalyptus grandis HOM05D004471 ORTHO05D005345 1.6e-41 173.3 123 68.3
Cre16.g663650 Chlamydomonas reinhardtii HOM05D004471 ORTHO05D005345 6.9e-40 167.9 176 49.4
Cpa.g.sc117.10 Carica papaya HOM05D004471 ORTHO05D005345 2.4e-37 159.5 117 65.8
Gorai.013G116700 Gossypium raimondii HOM05D004471 ORTHO05D005345 5.4e-37 158.3 117 67.5
CSS0014300 Camellia sinensis var. sinensis HOM05D002365 ORTHO05D005345 7.6e-31 137.9 120 58.3
Aa31LG1G24890 Aethionema arabicum HOM05D004471 ORTHO05D005345 2.2e-30 136.3 100 67.0
Aa31LG1G21870 Aethionema arabicum HOM05D004471 ORTHO05D005345 8.4e-30 134.4 107 61.7
Aa31LG1G26450 Aethionema arabicum HOM05D004471 ORTHO05D005345 2.4e-29 132.9 102 62.7
Pp3c13_13330 Physcomitrium patens HOM05D004471 ORTHO05D005345 9.0e-24 114.4 117 53.8
QL03p002083 Quercus lobata HOM05D004471 ORTHO05D005345 9.0e-24 114.4 96 61.5
CBR_g12958 Chara braunii HOM05D000019 ORTHO05D000002 2.6e-23 112.8 95 64.2
arahy.Tifrunner.gnm1.ann1.BCR285 Arachis hypogaea HOM05D004471 ORTHO05D005345 1.3e-22 110.5 60 80.0
MCO16G564 Micromonas commoda HOM05D004471 ORTHO05D005345 1.7e-22 110.2 147 38.1
Cfa024495 Carpinus fangiana HOM05D004471 ORTHO05D005345 2.5e-21 106.3 143 43.4
PRCOL_00002528 Prasinoderma coloniale HOM05D004471 ORTHO05D005345 7.1e-21 104.8 156 41.7
RcHm_v2.0_Chr5g0055691 Rosa chinensis HOM05D004471 ORTHO05D005345 5.7e-18 95.1 111 45.9
Aa31LG1G25270 Aethionema arabicum HOM05D004471 ORTHO05D005345 5.8e-15 85.1 81 56.8
Dinv27603 Davidia involucrata HOM05D004471 ORTHO05D005345 3.0e-11 72.8 52 63.5
Dinv27604 Davidia involucrata HOM05D004471 ORTHO05D005345 7.4e-10 68.2 52 61.5
FAN05G5407 Fragaria x ananassa HOM05D012224 ORTHO05D017959 9.7e-10 67.8 49 63.3
FAN02G2374 Fragaria x ananassa HOM05D012224 ORTHO05D017959 3.1e-08 62.8 50 60.0


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