Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0079 Marchantia polymorpha HOM05D024753 ORTHO05D031173 5.0e-287 990.3 475 100.0
Mapoly0002s0078 Marchantia polymorpha HOM05D024753 ORTHO05D031173 5.3e-95 352.4 511 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4719 Anthoceros agrestis HOM05D024753 ORTHO05D031173 6.7e-50 202.6 490 32.2
AagrBONN_evm.TU.Sc2ySwM_117.3395 Anthoceros agrestis HOM05D008059 ORTHO05D009361 2.1e-27 127.9 462 27.7
AagrBONN_evm.TU.Sc2ySwM_362.1782 Anthoceros agrestis HOM05D002809 ORTHO05D009361 8.0e-27 125.9 448 27.7
Mapoly0027s0007 Marchantia polymorpha HOM05D009810 ORTHO05D009361 2.6e-25 120.9 498 25.3
AagrBONN_evm.TU.Sc2ySwM_344.2000 Anthoceros agrestis HOM05D009810 ORTHO05D009361 1.1e-23 115.5 469 26.2
AagrBONN_evm.TU.Sc2ySwM_368.789 Anthoceros agrestis HOM05D022882 ORTHO05D009361 3.2e-23 114.0 487 26.5
AagrBONN_evm.TU.Sc2ySwM_362.2496 Anthoceros agrestis HOM05D004302 ORTHO05D009361 9.2e-23 112.5 426 27.2
AagrBONN_evm.TU.Sc2ySwM_362.1781 Anthoceros agrestis HOM05D022882 ORTHO05D009361 2.7e-22 110.9 323 31.0
AagrBONN_evm.TU.Sc2ySwM_368.2204 Anthoceros agrestis HOM05D009810 ORTHO05D009361 2.3e-21 107.8 316 28.8
AagrBONN_evm.TU.Sc2ySwM_362.1789 Anthoceros agrestis HOM05D002809 ORTHO05D009361 5.6e-20 103.2 302 30.8
AagrBONN_evm.TU.Sc2ySwM_362.2450 Anthoceros agrestis HOM05D002809 ORTHO05D009361 1.6e-19 101.7 428 25.0
Mapoly0015s0038 Marchantia polymorpha HOM05D008059 ORTHO05D009361 8.0e-19 99.4 405 29.1
AagrBONN_evm.TU.Sc2ySwM_344.1472 Anthoceros agrestis HOM05D008059 ORTHO05D009361 3.4e-17 94.0 418 24.4
AagrBONN_evm.TU.Sc2ySwM_362.1791 Anthoceros agrestis HOM05D008059 ORTHO05D009361 6.4e-16 89.7 443 26.0
AagrBONN_evm.TU.Sc2ySwM_362.250 Anthoceros agrestis HOM05D008059 ORTHO05D009361 3.2e-15 87.4 262 29.4
AagrBONN_evm.TU.Sc2ySwM_228.4705 Anthoceros agrestis HOM05D041323 ORTHO05D073076 7.0e-15 86.3 351 25.4
AagrBONN_evm.TU.Sc2ySwM_362.1449 Anthoceros agrestis HOM05D024753 ORTHO05D009361 4.6e-14 83.6 481 23.9
AagrBONN_evm.TU.Sc2ySwM_368.3141 Anthoceros agrestis HOM05D008059 ORTHO05D009361 1.5e-12 78.6 181 33.7
Mapoly0019s0019 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.6e-11 75.1 349 24.4
AagrBONN_evm.TU.Sc2ySwM_362.2449 Anthoceros agrestis HOM05D004302 ORTHO05D004939 2.8e-11 74.3 332 26.8
AagrBONN_evm.TU.Sc2ySwM_368.3140 Anthoceros agrestis HOM05D008059 ORTHO05D009361 3.6e-11 73.9 211 30.3
AagrBONN_evm.TU.Sc2ySwM_344.5363 Anthoceros agrestis HOM05D004302 ORTHO05D004939 4.7e-11 73.6 266 27.1
AagrBONN_evm.TU.Sc2ySwM_362.1934 Anthoceros agrestis HOM05D008059 ORTHO05D009361 4.7e-11 73.6 421 24.5
AagrBONN_evm.TU.Sc2ySwM_117.2864 Anthoceros agrestis HOM05D034345 ORTHO05D021244 3.1e-10 70.9 262 29.0
AagrBONN_evm.TU.Sc2ySwM_228.846 Anthoceros agrestis HOM05D002809 ORTHO05D004939 4.0e-10 70.5 350 24.3
AagrBONN_evm.TU.Sc2ySwM_368.3046 Anthoceros agrestis HOM05D008059 ORTHO05D009361 5.2e-10 70.1 288 27.1
AagrBONN_evm.TU.Sc2ySwM_228.5199 Anthoceros agrestis HOM05D008059 ORTHO05D009361 6.8e-10 69.7 271 27.7
AagrBONN_evm.TU.Sc2ySwM_228.1815 Anthoceros agrestis HOM05D009810 ORTHO05D009361 2.0e-09 68.2 338 23.7
AagrBONN_evm.TU.Sc2ySwM_117.1923 Anthoceros agrestis HOM05D022882 ORTHO05D009361 7.5e-09 66.2 430 23.5
AagrBONN_evm.TU.Sc2ySwM_344.5233 Anthoceros agrestis HOM05D008059 ORTHO05D009361 1.3e-08 65.5 331 27.5
AagrBONN_evm.TU.Sc2ySwM_368.3055 Anthoceros agrestis HOM05D008059 ORTHO05D009361 1.3e-08 65.5 322 25.8
Pp3c3_27650 Physcomitrium patens HOM05D002809 ORTHO05D036651 1.3e-08 65.5 289 26.6
Pp3c16_10660 Physcomitrium patens HOM05D002809 ORTHO05D012113 1.7e-08 65.1 271 26.6
AagrBONN_evm.TU.Sc2ySwM_228.5459 Anthoceros agrestis HOM05D009810 ORTHO05D009361 2.9e-08 64.3 207 30.0
Medtr7g017400 Medicago truncatula HOM05D004302 ORTHO05D004939 4.9e-08 63.5 179 28.5
TPR.G3302 Trifolium pratense HOM05D004302 ORTHO05D004939 4.9e-08 63.5 179 30.2
AagrBONN_evm.TU.Sc2ySwM_362.2234 Anthoceros agrestis HOM05D011220 ORTHO05D009361 1.1e-07 62.4 216 32.9
AagrBONN_evm.TU.Sc2ySwM_368.3049 Anthoceros agrestis HOM05D008059 ORTHO05D009361 1.1e-07 62.4 59 54.2
Lj1g0002235 Lotus japonicus HOM05D004302 ORTHO05D004939 1.1e-07 62.4 183 27.3
Mapoly0004s0143 Marchantia polymorpha HOM05D004302 ORTHO05D009361 1.1e-07 62.4 399 23.1
SEGI_34175 Sequoiadendron giganteum HOM05D015254 ORTHO05D018117 1.4e-07 62.0 191 30.4
Ca_06955_v3 Cicer arietinum L. HOM05D004302 ORTHO05D004939 1.9e-07 61.6 179 27.4
VMungo1383G1338 Vigna mungo HOM05D004302 ORTHO05D004939 1.9e-07 61.6 183 27.3
AagrBONN_evm.TU.Sc2ySwM_117.240 Anthoceros agrestis HOM05D009810 ORTHO05D009361 2.4e-07 61.2 96 38.5
PGR119G2572 Punica granatum HOM05D002809 ORTHO05D004563 2.4e-07 61.2 367 22.9
Glyma.18G275900 Glycine max HOM05D004302 ORTHO05D004939 3.2e-07 60.8 183 29.0
Pp3c25_9030 Physcomitrium patens HOM05D002809 ORTHO05D004939 4.1e-07 60.5 274 24.5
Pp3c5_4620 Physcomitrium patens HOM05D004302 ORTHO05D030462 4.1e-07 60.5 254 25.6
Potri.004G112400 Populus trichocarpa HOM05D004302 ORTHO05D004939 4.1e-07 60.5 179 25.7
Sc11g0000420 Simmondsia chinensis HOM05D002809 ORTHO05D004563 4.1e-07 60.5 234 26.1
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 5.4e-07 60.1 355 22.3
AagrBONN_evm.TU.Sc2ySwM_362.2688 Anthoceros agrestis HOM05D002809 ORTHO05D009361 7.1e-07 59.7 248 27.4
Duzib251G0128 Durio zibethinus HOM05D002809 ORTHO05D004563 7.1e-07 59.7 344 22.7
Sabra17G0088200 Salix brachista HOM05D004302 ORTHO05D004939 9.2e-07 59.3 179 29.6
Mapoly0170s0023 Marchantia polymorpha HOM05D002809 ORTHO05D004563 1.2e-06 58.9 261 24.5
Glyma.08G253600 Glycine max HOM05D004302 ORTHO05D004939 1.6e-06 58.5 183 27.3
Sabra04G0072300 Salix brachista HOM05D004302 ORTHO05D004939 1.6e-06 58.5 179 25.7
AagrBONN_evm.TU.Sc2ySwM_344.1858 Anthoceros agrestis HOM05D022882 ORTHO05D009361 2.1e-06 58.2 278 24.8
DCAR_025461 Daucus carota HOM05D004302 ORTHO05D004939 2.1e-06 58.2 179 25.7
Mapoly0005s0140 Marchantia polymorpha HOM05D002809 ORTHO05D004563 2.1e-06 58.2 67 43.3
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 2.1e-06 58.2 180 29.4
AagrBONN_evm.TU.Sc2ySwM_117.3660 Anthoceros agrestis HOM05D008059 ORTHO05D009361 2.7e-06 57.8 181 29.8
AagrBONN_evm.TU.Sc2ySwM_362.1901 Anthoceros agrestis HOM05D008059 ORTHO05D009361 2.7e-06 57.8 188 28.7
AagrBONN_evm.TU.Sc2ySwM_368.3161 Anthoceros agrestis HOM05D008059 ORTHO05D009361 2.7e-06 57.8 250 26.8
SMO367G1056 Selaginella moellendorffii HOM05D002809 ORTHO05D030467 2.7e-06 57.8 354 23.7
Sc14g0009090 Simmondsia chinensis HOM05D002809 ORTHO05D004563 2.7e-06 57.8 177 28.2
unitig_736.g22264 Utricularia gibba HOM05D004302 ORTHO05D004939 2.7e-06 57.8 179 27.9
AagrBONN_evm.TU.Sc2ySwM_368.2857 Anthoceros agrestis HOM05D011220 ORTHO05D009361 3.5e-06 57.4 218 29.4
AagrBONN_evm.TU.Sc2ySwM_368.3101 Anthoceros agrestis HOM05D008059 ORTHO05D009361 3.5e-06 57.4 220 28.2
Pp3c5_28830 Physcomitrium patens HOM05D004302 ORTHO05D010190 3.5e-06 57.4 265 23.4
Potri.017G102300 Populus trichocarpa HOM05D004302 ORTHO05D004939 3.5e-06 57.4 179 29.1
AagrBONN_evm.TU.Sc2ySwM_368.3103 Anthoceros agrestis HOM05D008059 ORTHO05D009361 4.6e-06 57.0 192 29.7
AagrBONN_evm.TU.Sc2ySwM_368.3157 Anthoceros agrestis HOM05D008059 ORTHO05D009361 4.6e-06 57.0 170 29.4
Atru.chr8.608 Acer truncatum HOM05D004302 ORTHO05D004939 6.0e-06 56.6 179 27.4
Ah.16g100910 Amaranthus hybridus HOM05D004302 ORTHO05D004939 6.0e-06 56.6 195 27.7
AagrBONN_evm.TU.Sc2ySwM_228.4758 Anthoceros agrestis HOM05D023825 ORTHO05D009361 6.0e-06 56.6 84 42.9
AagrBONN_evm.TU.Sc2ySwM_228.697 Anthoceros agrestis HOM05D023825 ORTHO05D009361 6.0e-06 56.6 52 51.9
AagrBONN_evm.TU.Sc2ySwM_368.3368 Anthoceros agrestis HOM05D008059 ORTHO05D009361 7.8e-06 56.2 188 26.6
Ciclev10011780m.g Citrus clementina HOM05D004302 ORTHO05D004939 7.8e-06 56.2 179 25.1
Manes.01G104600 Manihot esculenta HOM05D004302 ORTHO05D004939 7.8e-06 56.2 179 26.8
Mapoly0002s0187 Marchantia polymorpha HOM05D002809 ORTHO05D004563 7.8e-06 56.2 345 25.8


User provided reference genes

Program Settings