Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0050 Marchantia polymorpha HOM05D005040 ORTHO05D005984 1.3e-84 316.2 153 100.0
SEGI_18303 Sequoiadendron giganteum HOM05D005040 ORTHO05D005984 4.8e-58 228.0 149 67.8
PSO063G7160 Papaver somniferum HOM05D005040 ORTHO05D005984 2.0e-56 222.6 153 66.0
PSO782G4813 Papaver somniferum HOM05D005040 ORTHO05D005984 5.9e-56 221.1 153 65.4
Pp3c14_26240 Physcomitrium patens HOM05D005040 ORTHO05D005984 1.0e-55 220.3 153 67.3
CBR_g53740 Chara braunii HOM05D005040 ORTHO05D005984 1.7e-55 219.5 149 65.8
HPP92_007677 Vanilla planifolia HOM05D005040 ORTHO05D005984 6.5e-55 217.6 153 62.1
Atru.chr1.3264 Acer truncatum HOM05D005040 ORTHO05D005984 8.5e-55 217.2 153 64.7
Thecc.06G086300 Theobroma cacao HOM05D005040 ORTHO05D005984 1.1e-54 216.9 153 64.1
MD09G1213900 Malus domestica HOM05D005040 ORTHO05D005984 5.5e-54 214.5 153 64.1
Prupe.3G071900 Prunus persica HOM05D005040 ORTHO05D005984 5.5e-54 214.5 153 63.4
arahy.Tifrunner.gnm1.ann1.AGNB7P Arachis hypogaea HOM05D005040 ORTHO05D005984 7.2e-54 214.2 156 65.4
Cc04_g03490 Coffea canephora HOM05D005040 ORTHO05D005984 7.2e-54 214.2 153 62.7
Gohir.A09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 7.2e-54 214.2 153 63.4
AUR62011626 Chenopodium quinoa HOM05D005040 ORTHO05D005984 9.4e-54 213.8 149 65.1
MD17G1196000 Malus domestica HOM05D005040 ORTHO05D005984 9.4e-54 213.8 153 63.4
arahy.Tifrunner.gnm1.ann1.MTRR1H Arachis hypogaea HOM05D005040 ORTHO05D005984 1.2e-53 213.4 149 66.4
Gorai.011G077000 Gossypium raimondii HOM05D005040 ORTHO05D005984 1.6e-53 213.0 153 62.1
Manes.04G123000 Manihot esculenta HOM05D005040 ORTHO05D005984 1.6e-53 213.0 153 63.4
ClCG09G002180 Citrullus lanatus HOM05D005040 ORTHO05D005984 2.1e-53 212.6 149 62.4
Lj3g0025298 Lotus japonicus HOM05D005040 ORTHO05D005984 2.7e-53 212.2 153 64.1
CsaV3_7G033130 Cucumis sativus L. HOM05D005040 ORTHO05D005984 3.6e-53 211.8 153 60.8
Nitab4.5_0008982g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 4.7e-53 211.5 149 64.4
GSVIVG01017116001 Vitis vinifera HOM05D005040 ORTHO05D005984 4.7e-53 211.5 153 62.1
Lalb_Chr25g0279631 Lupinus albus HOM05D005040 ORTHO05D005984 6.1e-53 211.1 153 62.7
TAR624G1120 Trochodendron aralioides HOM05D005040 ORTHO05D005984 6.1e-53 211.1 149 61.7
HanXRQChr09g0275291 Helianthus annuus HOM05D005040 ORTHO05D005984 8.0e-53 210.7 153 62.1
Lj9C507G12 Lonicera japonica HOM05D005040 ORTHO05D005984 8.0e-53 210.7 149 61.7
Ciclev10026697m.g Citrus clementina HOM05D005040 ORTHO05D005984 1.0e-52 210.3 153 62.1
Gohir.A05G129132 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.4e-52 209.9 146 63.7
Nitab4.5_0000671g0070 Nicotiana tabacum HOM05D005040 ORTHO05D005984 1.4e-52 209.9 153 64.1
Nitab4.5_0010263g0010 Nicotiana tabacum HOM05D005040 ORTHO05D005984 1.4e-52 209.9 153 64.1
TWI75G0398 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 1.4e-52 209.9 153 62.1
TAR626G1436 Trochodendron aralioides HOM05D005040 ORTHO05D005984 1.4e-52 209.9 146 63.0
Zm00001eb161080 Zea mays HOM05D005040 ORTHO05D005984 1.4e-52 209.9 153 63.4
Gohir.A10G079800 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.8e-52 209.5 145 63.4
Peaxi162Scf00015g00334 Petunia axillaris HOM05D005040 ORTHO05D005984 1.8e-52 209.5 152 61.8
Dinv38056 Davidia involucrata HOM05D005040 ORTHO05D005984 2.3e-52 209.1 153 62.1
Eucgr.J02995 Eucalyptus grandis HOM05D005040 ORTHO05D005984 2.3e-52 209.1 145 64.1
Psat7g252720 Pisum sativum HOM05D005040 ORTHO05D005984 2.3e-52 209.1 153 63.4
PGSC0003DMG400002565 Solanum tuberosum HOM05D005040 ORTHO05D005984 2.3e-52 209.1 149 62.4
CSS0018986 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 3.0e-52 208.8 149 64.4
CiPaw.01G239800 Carya illinoinensis HOM05D005040 ORTHO05D005984 3.0e-52 208.8 149 60.4
MELO3C024227.2 Cucumis melo HOM05D005040 ORTHO05D005984 3.0e-52 208.8 153 60.1
Nn2g11793 Nelumbo nucifera HOM05D005040 ORTHO05D005984 3.0e-52 208.8 149 63.8
Nn8g39231 Nelumbo nucifera HOM05D005040 ORTHO05D005984 3.0e-52 208.8 145 64.1
Solyc03g120240.3 Solanum lycopersicum HOM05D005040 ORTHO05D005984 3.0e-52 208.8 149 61.7
CSS0035607 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 4.0e-52 208.4 149 63.8
Gohir.D10G071700 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.0e-52 208.4 153 61.4
Lalb_Chr04g0262641 Lupinus albus HOM05D005040 ORTHO05D005984 4.0e-52 208.4 153 62.7
Sopen03g039120 Solanum pennellii HOM05D005040 ORTHO05D005984 4.0e-52 208.4 149 61.7
Os01g0593600 Oryza sativa ssp. japonica HOM05D005040 ORTHO05D005984 8.8e-52 207.2 153 62.1
RcHm_v2.0_Chr2g0137751 Rosa chinensis HOM05D005040 ORTHO05D005984 8.8e-52 207.2 149 62.4
Lj5C61G9 Lonicera japonica HOM05D001315 ORTHO05D005984 1.2e-51 206.8 145 63.4
Duzib235G0181 Durio zibethinus HOM05D005040 ORTHO05D005984 1.5e-51 206.5 145 62.8
Oeu033483.1 Olea europaea HOM05D005040 ORTHO05D005984 1.5e-51 206.5 149 62.4
Manes.11G047900 Manihot esculenta HOM05D005040 ORTHO05D005984 2.0e-51 206.1 153 59.5
Sopen12g022320 Solanum pennellii HOM05D005040 ORTHO05D005984 2.6e-51 205.7 153 63.4
FvH4_6g31060 Fragaria vesca HOM05D005040 ORTHO05D005984 3.4e-51 205.3 149 61.1
FAN09G4279 Fragaria x ananassa HOM05D005040 ORTHO05D005984 3.4e-51 205.3 149 61.1
FAN14G0270 Fragaria x ananassa HOM05D005040 ORTHO05D005984 3.4e-51 205.3 149 61.1
Gorai.006G098900 Gossypium raimondii HOM05D005040 ORTHO05D005984 3.4e-51 205.3 149 62.4
Gorai.009G133000 Gossypium raimondii HOM05D005040 ORTHO05D005984 3.4e-51 205.3 146 61.6
Gohir.D09G083300 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.4e-51 204.9 153 61.4
HanXRQChr16g0501001 Helianthus annuus HOM05D005040 ORTHO05D005984 4.4e-51 204.9 149 61.1
Sed0010677 Sechium edule HOM05D005040 ORTHO05D005984 4.4e-51 204.9 153 59.5
PGSC0003DMG400028614 Solanum tuberosum HOM05D005040 ORTHO05D005984 4.4e-51 204.9 149 62.4
Glyma.08G207000 Glycine max HOM05D005040 ORTHO05D005984 5.7e-51 204.5 153 60.1
Phvul.010G150900 Phaseolus vulgaris HOM05D005040 ORTHO05D005984 5.7e-51 204.5 153 60.1
Rhsim08G0220800 Rhododendron simsii HOM05D005040 ORTHO05D005984 7.5e-51 204.1 153 60.1
FAN02G3733 Fragaria x ananassa HOM05D005040 ORTHO05D005984 9.8e-51 203.8 149 60.4
CANSAT56G1939 Cannabis sativa HOM05D005040 ORTHO05D005984 1.3e-50 203.4 153 58.2
Sabra03G0031500 Salix brachista HOM05D005040 ORTHO05D005984 1.3e-50 203.4 152 60.5
Hund06608 Selenicereus undatus HOM05D005040 ORTHO05D005984 1.3e-50 203.4 145 64.1
unitig_8.g3893 Utricularia gibba HOM05D005040 ORTHO05D005984 1.3e-50 203.4 149 60.4
CiPaw.02G151500 Carya illinoinensis HOM05D005040 ORTHO05D005984 1.7e-50 203.0 149 59.1
arahy.Tifrunner.gnm1.ann1.PJIU2I Arachis hypogaea HOM05D005040 ORTHO05D005984 2.2e-50 202.6 149 59.7
arahy.Tifrunner.gnm1.ann1.QU6Z4C Arachis hypogaea HOM05D005040 ORTHO05D005984 2.2e-50 202.6 149 59.7
CAN.G438.63 Capsicum annuum HOM05D005040 ORTHO05D005984 2.2e-50 202.6 153 60.8
Glyma.07G006400 Glycine max HOM05D005040 ORTHO05D005984 2.2e-50 202.6 153 59.5
VMungo0331G0128 Vigna mungo HOM05D005040 ORTHO05D005984 2.2e-50 202.6 149 60.4
TPR.G24183 Trifolium pratense HOM05D005040 ORTHO05D005984 2.8e-50 202.2 153 60.1
Migut.I00862 Erythranthe guttata HOM05D005040 ORTHO05D005984 3.7e-50 201.8 149 61.1
Sc21g0005090 Simmondsia chinensis HOM05D005040 ORTHO05D005984 3.7e-50 201.8 153 58.8
TWI18G1133 Tripterygium wilfordii HOM05D005040 ORTHO05D005984 3.7e-50 201.8 153 60.1
AL2G41560 Arabidopsis lyrata HOM05D005040 ORTHO05D005984 4.8e-50 201.4 145 59.3
Medtr4g011980 Medicago truncatula HOM05D005040 ORTHO05D005984 4.8e-50 201.4 153 59.5
CSS0024080 Camellia sinensis var. sinensis HOM05D005040 ORTHO05D005984 1.1e-49 200.3 153 58.8
FAN05G0686 Fragaria x ananassa HOM05D005040 ORTHO05D005984 1.1e-49 200.3 149 60.4
BraA02t07378Z Brassica rapa HOM05D005040 ORTHO05D005984 1.4e-49 199.9 145 59.3
EL10Ac9g21995 Beta vulgaris HOM05D005040 ORTHO05D005984 1.8e-49 199.5 149 62.4
PGR102G2548 Punica granatum HOM05D005040 ORTHO05D005984 2.4e-49 199.1 153 60.1
Rhsim12G0197400 Rhododendron simsii HOM05D005040 ORTHO05D005984 2.4e-49 199.1 159 58.5
SGA_v2.0_scaffold4G01995 Striga asiatica HOM05D005040 ORTHO05D005984 3.1e-49 198.7 156 60.9
Aa31LG4G290 Aethionema arabicum HOM05D001315 ORTHO05D001618 4.1e-49 198.4 145 56.6
AT1G79985 Arabidopsis thaliana HOM05D005040 ORTHO05D005984 4.1e-49 198.4 145 58.6
Thhalv10019282m.g Eutrema salsugineum HOM05D005040 ORTHO05D005984 4.1e-49 198.4 145 58.6
Hund00613 Selenicereus undatus HOM05D005040 ORTHO05D005984 7.0e-49 197.6 149 61.1
Gohir.D05G128900 Gossypium hirsutum HOM05D005040 ORTHO05D005984 9.1e-49 197.2 146 61.0
DCAR_007558 Daucus carota HOM05D005040 ORTHO05D005984 1.2e-48 196.8 149 61.7
Lj3g0009600 Lotus japonicus HOM05D005040 ORTHO05D005984 1.2e-48 196.8 149 59.1
Potri.003G056100 Populus trichocarpa HOM05D005040 ORTHO05D005984 1.2e-48 196.8 146 61.0
CARHR074500 Cardamine hirsuta HOM05D005040 ORTHO05D005984 1.6e-48 196.4 145 57.2
vmacro16949 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 1.6e-48 196.4 149 59.1
BolC2t09779H Brassica oleracea HOM05D005040 ORTHO05D005984 2.7e-48 195.7 145 58.6
SGA_v2.0_scaffold37G14817 Striga asiatica HOM05D005040 ORTHO05D005984 2.7e-48 195.7 149 57.7
vmacro18916 Vaccinium macrocarpon HOM05D005040 ORTHO05D005984 2.7e-48 195.7 146 60.3
Sp5g35760 Schrenkiella parvula HOM05D005040 ORTHO05D005984 3.5e-48 195.3 145 55.9
BcaC03g16009 Brassica carinata HOM05D005040 ORTHO05D005984 4.5e-48 194.9 145 57.9
Oeu025385.1 Olea europaea HOM05D005040 ORTHO05D005984 4.5e-48 194.9 149 59.1
C02p37640 Brassica napus HOM05D005040 ORTHO05D005984 5.9e-48 194.5 145 57.2
Potri.001G179500 Populus trichocarpa HOM05D005040 ORTHO05D005984 5.9e-48 194.5 153 58.8
Sabra01G0147300 Salix brachista HOM05D005040 ORTHO05D005984 2.2e-47 192.6 149 60.4
A07p26430 Brassica napus HOM05D001315 ORTHO05D001618 5.0e-47 191.4 145 55.9
C06p28820 Brassica napus HOM05D001315 ORTHO05D001618 5.0e-47 191.4 145 55.9
BraA07t30287Z Brassica rapa HOM05D001315 ORTHO05D001618 5.0e-47 191.4 145 55.9
Carub.0002s2753 Capsella rubella HOM05D005040 ORTHO05D005984 6.5e-47 191.0 153 54.9
THA.LOC104813561 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 8.5e-47 190.7 144 59.0
THA.LOC104821737 Tarenaya hassleriana HOM05D005040 ORTHO05D005984 8.5e-47 190.7 144 59.0
QL05p024322 Quercus lobata HOM05D005040 ORTHO05D005984 2.5e-46 189.1 149 57.0
A02p23850 Brassica napus HOM05D005040 ORTHO05D005984 1.6e-45 186.4 163 51.5
Duzib192G0809 Durio zibethinus HOM05D005040 ORTHO05D005984 1.2e-43 180.3 145 57.2
FAN14G2190 Fragaria x ananassa HOM05D005040 ORTHO05D005984 7.5e-43 177.6 149 53.7
BcaB05g25300 Brassica carinata HOM05D005040 ORTHO05D005984 1.3e-42 176.8 145 54.5
FvH4_6g49470 Fragaria vesca HOM05D005040 ORTHO05D005984 2.8e-42 175.6 149 53.0
Nitab4.5_0002438g0060 Nicotiana tabacum HOM05D005040 ORTHO05D005984 8.3e-42 174.1 149 55.7
Gorai.002G059200 Gossypium raimondii HOM05D005040 ORTHO05D005984 7.3e-38 161.0 139 52.5
Lsat_1_v5_gn_4_103600 Lactuca sativa HOM05D005040 ORTHO05D005984 8.0e-37 157.5 118 60.2
Gohir.A02G121600 Gossypium hirsutum HOM05D005040 ORTHO05D005984 8.9e-36 154.1 152 48.7
CDE02G1346 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 1.2e-35 153.7 110 64.5
ECA232G2706 Erigeron canadensis HOM05D005040 ORTHO05D005984 1.5e-35 153.3 122 56.6
Cre10.g423950 Chlamydomonas reinhardtii HOM05D005040 ORTHO05D005984 1.8e-33 146.4 149 43.6
Actinidia24761 Actinidia chinensis HOM05D005040 ORTHO05D005984 2.4e-33 146.0 120 55.8
CDE04G1379 Ceratophyllum demersum HOM05D005040 ORTHO05D005984 2.4e-33 146.0 110 60.9
Pp3c17_23510 Physcomitrium patens HOM05D005040 ORTHO05D005984 5.4e-33 144.8 150 51.3
PRCOL_00001887 Prasinoderma coloniale HOM05D005040 ORTHO05D005984 5.4e-33 144.8 144 50.7
BcaC08g45282 Brassica carinata HOM05D005040 ORTHO05D005984 9.2e-33 144.1 120 51.7
unitig_22.g5468 Utricularia gibba HOM05D005040 ORTHO05D005984 3.0e-31 139.0 178 43.3
Actinidia01801 Actinidia chinensis HOM05D005040 ORTHO05D005984 4.9e-26 121.7 102 55.9
arahy.Tifrunner.gnm1.ann1.1DTY35 Arachis hypogaea HOM05D005040 ORTHO05D005984 5.0e-23 111.7 121 47.1
Actinidia32759 Actinidia chinensis HOM05D005040 ORTHO05D005984 1.1e-22 110.5 78 64.1
Gohir.D03G064100 Gossypium hirsutum HOM05D005040 ORTHO05D005984 1.9e-22 109.8 99 52.5
Lalb_Chr01g0012631 Lupinus albus HOM05D005040 ORTHO05D005984 4.3e-22 108.6 75 66.7
MBI01_g34903_MAGBIO Magnolia biondii HOM05D005040 ORTHO05D005984 7.3e-22 107.8 75 62.7
Zm00001eb357580 Zea mays HOM05D005040 ORTHO05D005984 4.7e-21 105.1 75 64.0
SalBow2G1342 Salvia bowleyana HOM05D005040 ORTHO05D005984 6.8e-20 101.3 83 56.6
SalBow2G3126 Salvia bowleyana HOM05D005040 ORTHO05D005984 1.5e-19 100.1 89 50.6
Gohir.D02G105550 Gossypium hirsutum HOM05D005040 ORTHO05D005984 4.4e-19 98.6 60 68.3
Gorai.005G119900 Gossypium raimondii HOM05D005040 ORTHO05D005984 4.4e-19 98.6 60 68.3
Lalb_Chr01g0012641 Lupinus albus HOM05D005040 ORTHO05D005984 6.4e-18 94.7 75 53.3
DCAR_026311 Daucus carota HOM05D001315 ORTHO05D001618 4.1e-17 92.0 78 53.8
Solyc12g043060.1 Solanum lycopersicum HOM05D005040 ORTHO05D005984 4.3e-06 55.5 48 50.0


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