Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 0.0e+00 1327.4 694 100.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 2.8e-161 573.2 694 48.6
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 7.1e-149 531.9 686 44.5
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.1e-146 524.6 677 45.2
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.7e-142 510.8 691 44.0
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 6.0e-140 502.3 674 44.1
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.0e-139 500.0 697 42.5
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 5.1e-139 499.2 708 42.4
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 6.7e-139 498.8 675 45.0
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.5e-138 497.7 677 43.7
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 4.3e-138 496.1 691 43.3
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 2.8e-137 493.4 684 43.7
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.1e-136 491.5 685 43.5
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.4e-136 491.1 684 43.0
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.4e-136 491.1 702 42.0
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 4.0e-136 489.6 674 42.6
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 4.0e-136 489.6 685 43.4
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 4.0e-136 489.6 685 43.4
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.4e-135 486.5 679 43.9
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 3.4e-135 486.5 680 41.9
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 4.5e-135 486.1 677 44.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 7.6e-135 485.3 679 42.9
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 2.9e-134 483.4 676 43.0
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 2.9e-134 483.4 683 42.2
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 8.4e-134 481.9 684 42.7
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 8.4e-134 481.9 686 43.7
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.4e-133 481.1 675 43.7
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.4e-133 481.1 677 43.7
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.9e-133 480.7 674 42.4
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.9e-133 480.7 694 41.6
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 3.2e-133 479.9 673 42.8
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 9.3e-133 478.4 681 41.9
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.6e-132 477.6 693 41.1
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 1.6e-132 477.6 719 40.9
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 2.7e-132 476.9 677 42.2
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 4.6e-132 476.1 675 43.7
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 4.6e-132 476.1 690 42.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 4.6e-132 476.1 682 42.4
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 1.0e-131 474.9 688 41.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.0e-131 474.9 680 41.3
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.3e-131 474.6 678 43.5
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.8e-131 474.2 681 42.9
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 2.3e-131 473.8 684 41.5
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 3.0e-131 473.4 677 42.1
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 3.9e-131 473.0 679 42.0
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.9e-131 473.0 679 42.7
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 8.7e-131 471.9 685 42.5
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 2.5e-130 470.3 672 42.7
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.3e-130 469.9 678 43.2
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.3e-130 469.5 684 41.7
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 4.3e-130 469.5 700 42.7
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 5.6e-130 469.2 671 42.0
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.4e-130 468.8 676 43.3
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.6e-129 467.6 675 43.6
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.6e-129 467.6 685 41.5
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 3.7e-129 466.5 694 41.8
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 4.8e-129 466.1 679 41.4
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 8.2e-129 465.3 675 43.1
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 8.2e-129 465.3 682 42.5
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 8.2e-129 465.3 680 42.4
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.8e-128 464.2 674 42.6
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 1.8e-128 464.2 677 41.8
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 3.1e-128 463.4 672 41.1
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 5.3e-128 462.6 677 41.7
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 5.3e-128 462.6 695 40.6
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 6.9e-128 462.2 685 40.9
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.4e-127 459.9 680 42.5
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.0e-126 458.4 686 41.1
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.3e-126 458.0 685 41.5
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.7e-126 457.6 675 41.6
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 2.5e-125 453.8 685 41.6
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 1.8e-123 447.6 690 39.6
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 2.3e-123 447.2 678 42.6
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 8.7e-123 445.3 664 41.1
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.5e-122 443.7 685 40.7
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 1.1e-120 438.3 684 40.1
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 4.1e-120 436.4 694 40.5
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 5.3e-120 436.0 651 40.2
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 6.9e-120 435.6 693 39.7
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 6.9e-120 435.6 691 40.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 9.0e-120 435.3 689 40.3
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 3.4e-119 433.3 685 39.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 4.5e-119 433.0 678 41.2
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.0e-118 431.8 671 40.8
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 1.7e-118 431.0 686 40.2
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 1.7e-118 431.0 696 39.7
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 5.0e-118 429.5 687 40.3
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 5.0e-118 429.5 689 39.5
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 6.5e-118 429.1 677 40.0
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 8.5e-118 428.7 687 40.5
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.1e-117 428.3 678 39.2
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 3.2e-117 426.8 674 40.4
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 4.2e-117 426.4 686 39.9
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 1.2e-116 424.9 682 41.1
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.6e-116 424.5 634 41.5
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.4e-115 421.4 692 38.4
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 3.9e-115 419.9 674 41.2
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 1.3e-113 414.8 681 41.1
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 3.7e-113 413.3 662 39.7
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 6.3e-113 412.5 611 41.6
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 3.3e-106 390.2 647 38.6
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 7.0e-104 382.5 653 37.5
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 5.9e-103 379.4 625 39.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 1.3e-102 378.3 479 44.1
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 2.1e-92 344.4 623 39.8
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 1.2e-84 318.5 564 37.2
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.0e-70 272.3 357 43.1
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 6.8e-67 259.6 313 46.3
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 5.4e-64 250.0 352 43.5
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.5e-61 241.1 347 41.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.1e-60 238.0 497 33.8
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.8e-59 235.0 331 43.5
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 2.1e-55 221.5 252 50.0
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 4.4e-42 177.2 210 42.4
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 2.4e-40 171.4 251 41.4
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 9.6e-37 159.5 331 34.1
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 8.1e-36 156.4 263 37.3
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.3e-21 107.8 176 35.8
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 4.6e-15 87.4 92 43.5
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 8.4e-09 66.6 90 43.3
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 2.7e-07 61.6 403 24.8


User provided reference genes

Program Settings