Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 2.2e-56 222.2 129 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 3.0e-16 89.0 103 42.7
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 2.0e-12 76.3 76 50.0
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 2.2e-11 72.8 76 39.5
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 2.9e-11 72.4 68 47.1
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 4.9e-11 71.6 69 46.4
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 6.4e-11 71.2 81 42.0
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 8.3e-11 70.9 76 42.1
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 1.1e-10 70.5 80 40.0
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.4e-10 70.1 60 43.3
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 1.9e-10 69.7 85 42.4
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 1.9e-10 69.7 85 42.4
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 2.4e-10 69.3 69 43.5
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 3.2e-10 68.9 90 38.9
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 4.1e-10 68.6 88 38.6
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 4.1e-10 68.6 85 38.8
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 5.4e-10 68.2 87 39.1
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 5.4e-10 68.2 86 39.5
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 7.0e-10 67.8 80 40.0
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 7.0e-10 67.8 88 35.2
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 9.2e-10 67.4 66 47.0
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 1.2e-09 67.0 84 41.7
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 1.6e-09 66.6 79 38.0
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.6e-09 66.6 76 42.1
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.6e-09 66.6 86 40.7
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 1.6e-09 66.6 89 34.8
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.6e-09 66.6 80 36.2
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 2.7e-09 65.9 91 39.6
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 2.7e-09 65.9 91 37.4
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 3.5e-09 65.5 78 38.5
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 3.5e-09 65.5 78 38.5
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 3.5e-09 65.5 78 38.5
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 3.5e-09 65.5 78 38.5
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 3.5e-09 65.5 77 40.3
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 4.6e-09 65.1 51 52.9
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 4.6e-09 65.1 83 38.6
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 6.0e-09 64.7 76 40.8
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 6.0e-09 64.7 76 40.8
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 6.0e-09 64.7 85 36.5
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 6.0e-09 64.7 90 41.1
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 7.8e-09 64.3 92 33.7
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 7.8e-09 64.3 75 42.7
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 7.8e-09 64.3 84 36.9
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 7.8e-09 64.3 94 36.2
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.3e-08 63.5 69 47.8
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.3e-08 63.5 77 40.3
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.7e-08 63.2 86 39.5
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 2.3e-08 62.8 68 39.7
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.3e-08 62.8 52 51.9
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 2.3e-08 62.8 52 51.9
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 2.3e-08 62.8 94 35.1
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 3.9e-08 62.0 83 37.3
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 3.9e-08 62.0 88 34.1
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 5.0e-08 61.6 77 45.5
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 6.6e-08 61.2 69 44.9
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 6.6e-08 61.2 43 62.8
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 6.6e-08 61.2 94 29.8
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 8.6e-08 60.8 69 39.1
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 8.6e-08 60.8 83 34.9
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 8.6e-08 60.8 60 45.0
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 8.6e-08 60.8 46 52.2
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 1.5e-07 60.1 61 45.9
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 1.5e-07 60.1 85 35.3
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 2.5e-07 59.3 60 43.3
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 3.3e-07 58.9 68 38.2
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 3.3e-07 58.9 70 45.7
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 3.3e-07 58.9 60 45.0
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 3.3e-07 58.9 37 62.2
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 5.6e-07 58.2 60 43.3
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 5.6e-07 58.2 78 43.6
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 5.6e-07 58.2 68 41.2
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 2.8e-06 55.8 80 41.2
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 2.8e-06 55.8 45 51.1
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 2.8e-06 55.8 69 34.8
AagrBONN_evm.TU.Sc2ySwM_344.3283 Anthoceros agrestis HOM05D007718 ORTHO05D009752 4.7e-06 55.1 49 49.0
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 6.2e-06 54.7 45 48.9


User provided reference genes

Program Settings