Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 1.2e-174 616.7 367 100.0
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 6.1e-91 338.6 256 66.8
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 8.8e-90 334.7 250 66.0
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 9.7e-89 331.3 249 66.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.3e-88 330.9 253 64.0
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 2.2e-88 330.1 256 65.2
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 2.8e-88 329.7 249 65.1
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 4.8e-88 328.9 253 63.6
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 1.1e-87 327.8 251 64.5
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 3.1e-87 326.2 255 62.7
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 5.3e-87 325.5 247 64.8
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 7.0e-87 325.1 253 64.4
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 1.2e-86 324.3 254 63.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.6e-86 323.9 254 63.4
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 1.6e-86 323.9 254 63.4
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 1.6e-86 323.9 255 63.5
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 2.0e-86 323.6 252 63.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 3.5e-86 322.8 253 62.1
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 3.5e-86 322.8 247 66.4
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 7.7e-86 321.6 254 63.0
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 7.7e-86 321.6 247 64.0
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 1.0e-85 321.2 255 63.1
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 1.0e-85 321.2 254 63.0
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.7e-85 320.5 255 61.6
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 1.7e-85 320.5 249 62.7
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 2.2e-85 320.1 249 63.5
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.9e-85 319.7 282 58.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 3.8e-85 319.3 255 61.6
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 3.8e-85 319.3 255 62.4
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 6.5e-85 318.5 251 62.9
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.1e-84 317.8 260 62.7
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 1.5e-84 317.4 255 62.0
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.5e-84 317.4 254 62.2
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.9e-84 317.0 254 61.0
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.9e-84 317.0 252 60.7
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 2.5e-84 316.6 253 61.3
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 2.5e-84 316.6 247 62.3
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.5e-84 316.6 253 62.1
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 4.2e-84 315.8 253 60.9
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 5.5e-84 315.5 249 63.1
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 9.4e-84 314.7 244 61.9
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.2e-83 314.3 247 62.8
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 2.1e-83 313.5 255 62.7
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 2.1e-83 313.5 254 61.0
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 3.6e-83 312.8 248 62.1
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 3.6e-83 312.8 251 61.0
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 6.1e-83 312.0 247 63.2
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 6.1e-83 312.0 255 60.8
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 6.1e-83 312.0 248 62.1
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 6.1e-83 312.0 254 61.0
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 6.1e-83 312.0 271 58.7
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 6.1e-83 312.0 249 61.8
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 1.0e-82 311.2 255 60.4
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 1.0e-82 311.2 248 61.7
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.0e-82 311.2 249 61.4
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 1.0e-82 311.2 249 60.6
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.4e-82 310.8 247 63.6
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 2.3e-82 310.1 247 62.8
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 3.0e-82 309.7 274 58.0
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 4.0e-82 309.3 249 61.0
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.2e-82 308.9 258 60.5
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 5.2e-82 308.9 248 61.3
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.2e-81 307.8 263 60.5
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.6e-81 306.6 248 60.1
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 2.6e-81 306.6 248 60.1
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 3.3e-81 306.2 258 59.7
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 4.4e-81 305.8 248 60.9
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 5.7e-81 305.4 266 57.9
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 7.5e-81 305.1 248 59.7
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 9.7e-81 304.7 252 61.1
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.7e-80 303.9 261 56.7
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 2.8e-80 303.1 248 60.1
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 4.8e-80 302.4 250 61.2
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 4.8e-80 302.4 299 55.2
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 6.3e-80 302.0 250 61.2
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.4e-79 300.8 249 59.8
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 7.0e-79 298.5 295 55.3
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 2.7e-78 296.6 287 55.1
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 2.7e-78 296.6 255 59.6
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 5.9e-78 295.4 247 60.7
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.9e-77 293.1 298 51.3
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 1.1e-76 291.2 293 53.6
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 1.9e-76 290.4 253 59.3
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 2.5e-76 290.0 283 53.4
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.0e-74 284.6 250 56.4
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 1.0e-74 284.6 233 61.4
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 2.3e-74 283.5 255 56.1
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.2e-74 282.3 253 56.1
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 8.8e-74 281.6 259 57.5
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 6.3e-72 275.4 258 55.4
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 1.8e-71 273.9 270 54.8
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 5.5e-68 262.3 255 54.9
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 4.7e-67 259.2 216 58.3
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 4.4e-65 252.7 243 56.4
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 7.5e-65 251.9 232 55.6
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 6.3e-64 248.8 203 61.6
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.1e-60 238.0 190 63.7
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 1.5e-60 237.7 190 63.2
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 1.5e-60 237.7 203 59.6
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 3.3e-60 236.5 244 49.2
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 4.3e-60 236.1 270 51.5
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 1.5e-57 227.6 190 58.9
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 6.6e-53 212.2 212 53.8
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 3.3e-52 209.9 215 55.3
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 2.9e-48 196.8 159 60.4
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 1.2e-46 191.4 296 40.2
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 3.0e-45 186.8 310 39.0
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 3.0e-45 186.8 286 40.6
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.3e-36 155.6 137 59.9
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 7.3e-36 155.6 238 39.1
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 8.1e-35 152.1 137 59.1
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 1.1e-34 151.8 138 58.7
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 2.4e-34 150.6 138 59.4
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 5.2e-34 149.4 138 58.0
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.0e-26 123.2 112 62.5
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 2.4e-18 97.4 157 34.4
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 2.3e-13 80.9 65 60.0
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.1e-12 78.6 80 50.0
AagrBONN_evm.TU.Sc2ySwM_117.310 Anthoceros agrestis HOM05D020303 ORTHO05D021299 7.9e-06 55.8 115 28.7


User provided reference genes

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