Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 4.1e-105 384.8 201 100.0
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.3e-46 188.7 166 57.2
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 4.6e-40 168.7 131 60.3
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 1.6e-37 160.2 140 52.9
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.7e-34 149.1 192 45.8
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 1.0e-31 141.0 159 49.7
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 3.9e-31 139.0 158 47.5
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.5e-30 137.1 157 46.5
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 1.2e-29 134.0 153 47.1
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.6e-29 133.7 162 46.3
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.1e-29 133.3 154 45.5
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 4.7e-29 132.1 157 46.5
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 4.7e-29 132.1 141 48.9
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 1.1e-28 131.0 161 48.4
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 1.4e-28 130.6 159 45.9
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 1.4e-28 130.6 163 47.9
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 2.4e-28 129.8 153 45.8
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 4.0e-28 129.0 159 45.3
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 5.2e-28 128.6 158 45.6
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 5.2e-28 128.6 162 45.7
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 6.8e-28 128.3 157 43.9
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 6.8e-28 128.3 164 42.7
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 8.9e-28 127.9 161 45.3
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 2.0e-27 126.7 165 43.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 2.6e-27 126.3 163 42.9
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 5.8e-27 125.2 151 45.0
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 9.9e-27 124.4 166 45.2
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 9.9e-27 124.4 160 43.1
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 9.9e-27 124.4 171 43.3
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 9.9e-27 124.4 154 46.1
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 1.3e-26 124.0 156 44.2
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.3e-26 124.0 162 46.9
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.2e-26 123.2 157 44.6
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 2.2e-26 123.2 164 43.3
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 2.9e-26 122.9 154 44.8
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 3.8e-26 122.5 160 40.6
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 3.8e-26 122.5 166 41.6
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 3.8e-26 122.5 156 41.0
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.9e-26 122.1 154 43.5
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 6.4e-26 121.7 164 44.5
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 8.4e-26 121.3 156 44.2
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 8.4e-26 121.3 155 41.9
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.1e-25 120.9 156 44.2
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.1e-25 120.9 187 43.3
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 1.9e-25 120.2 156 44.9
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 3.2e-25 119.4 151 43.7
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.2e-25 119.4 153 45.1
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 5.4e-25 118.6 156 44.9
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 7.1e-25 118.2 171 39.2
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.2e-24 117.5 153 39.2
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.1e-24 116.7 159 39.0
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.1e-24 116.7 162 42.6
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.1e-24 116.7 158 45.6
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 3.5e-24 115.9 160 40.6
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 3.5e-24 115.9 158 40.5
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 4.6e-24 115.5 155 42.6
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 4.6e-24 115.5 157 43.3
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 4.6e-24 115.5 174 37.9
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 6.0e-24 115.2 163 41.7
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 6.0e-24 115.2 139 42.4
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 7.8e-24 114.8 153 44.4
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.0e-23 114.4 163 37.4
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.7e-23 113.6 161 42.9
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.7e-23 113.6 159 40.9
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 1.7e-23 113.6 162 43.2
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 3.0e-23 112.8 145 44.8
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 3.0e-23 112.8 161 44.1
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.9e-23 112.5 154 40.9
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 3.9e-23 112.5 164 44.5
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 8.7e-23 111.3 167 42.5
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 8.7e-23 111.3 163 40.5
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 8.7e-23 111.3 157 41.4
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.5e-22 110.5 156 43.6
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 1.5e-22 110.5 155 40.6
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 2.5e-22 109.8 157 39.5
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 3.3e-22 109.4 150 39.3
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 4.3e-22 109.0 159 43.4
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 5.6e-22 108.6 155 40.0
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 7.3e-22 108.2 157 41.4
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 7.3e-22 108.2 159 40.3
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 7.3e-22 108.2 159 39.6
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 1.2e-21 107.5 138 42.0
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 1.2e-21 107.5 160 40.6
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.6e-21 107.1 153 37.9
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 2.1e-21 106.7 158 37.3
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 2.8e-21 106.3 186 39.2
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 3.6e-21 105.9 156 41.0
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 4.7e-21 105.5 147 39.5
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 4.7e-21 105.5 158 38.6
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 4.7e-21 105.5 171 38.0
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.7e-21 105.5 157 38.9
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.7e-21 105.5 159 40.9
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 6.2e-21 105.1 147 38.8
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 6.2e-21 105.1 159 39.6
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 8.1e-21 104.8 121 46.3
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 8.1e-21 104.8 154 39.6
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 1.1e-20 104.4 147 38.8
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 1.1e-20 104.4 166 38.0
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 1.4e-20 104.0 157 39.5
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 1.8e-20 103.6 155 39.4
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.8e-20 103.6 158 40.5
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 2.4e-20 103.2 151 41.1
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 2.4e-20 103.2 158 39.9
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 4.0e-20 102.4 162 40.7
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 5.3e-20 102.1 141 44.0
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 1.2e-19 100.9 165 35.8
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.2e-19 100.9 151 39.1
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.2e-19 100.9 168 37.5
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 1.5e-19 100.5 179 38.5
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.6e-19 99.8 154 39.0
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 3.4e-19 99.4 149 37.6
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 3.4e-19 99.4 178 36.0
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.4e-19 99.4 157 36.3
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.3e-18 97.4 137 40.1
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 1.3e-18 97.4 147 38.1
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 1.7e-18 97.1 179 38.0
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 6.4e-18 95.1 150 36.0
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 8.4e-18 94.7 165 38.2
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-17 94.4 159 35.2
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 1.1e-17 94.4 159 35.2
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 5.4e-17 92.0 150 33.3
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 5.4e-17 92.0 164 36.0
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 9.3e-17 91.3 155 36.1
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 9.3e-17 91.3 155 36.1
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 3.5e-16 89.4 152 37.5
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.7e-15 87.0 117 40.2
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.0e-15 86.3 142 35.9
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.9e-15 85.9 142 36.6
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 1.1e-14 84.3 160 35.6
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 1.9e-14 83.6 142 35.9
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 5.6e-14 82.0 87 49.4
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 5.6e-14 82.0 87 49.4
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 4.8e-13 79.0 166 33.1
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 4.8e-13 79.0 161 37.3
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 8.1e-13 78.2 123 39.8
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 8.1e-13 78.2 153 33.3
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.1e-13 78.2 156 38.5
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-12 77.8 143 36.4
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.4e-12 77.4 161 36.0
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 3.1e-12 76.3 164 33.5
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 5.3e-12 75.5 132 34.8
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 9.0e-12 74.7 133 35.3
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 9.0e-12 74.7 161 36.6
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 9.0e-12 74.7 161 36.6
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.3e-10 70.9 49 67.3
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.3e-10 70.9 49 67.3
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 2.2e-10 70.1 73 50.7
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 2.9e-10 69.7 144 34.7
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 8.4e-10 68.2 132 34.8
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 1.9e-09 67.0 63 54.0
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 4.2e-09 65.9 104 37.5
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 5.4e-09 65.5 132 33.3
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 9.3e-09 64.7 85 45.9
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 2.7e-08 63.2 94 40.4
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 2.7e-08 63.2 126 33.3
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 6.0e-08 62.0 132 34.8
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.3e-07 60.8 72 44.4
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 1.1e-06 57.8 157 29.3
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 1.5e-06 57.4 93 36.6


User provided reference genes

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