Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 7.8e-71 270.4 140 100.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.9e-32 142.9 118 62.7
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.2e-31 140.2 117 61.5
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 7.9e-31 137.5 112 62.5
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 5.6e-29 131.3 122 50.0
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.8e-28 129.0 122 49.2
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.8e-28 129.0 122 49.2
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 1.8e-27 126.3 121 49.6
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 4.0e-27 125.2 121 49.6
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 4.0e-27 125.2 121 49.6
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 5.3e-27 124.8 122 50.0
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 6.9e-27 124.4 119 48.7
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.2e-26 123.6 119 49.6
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.5e-26 123.2 81 69.1
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 2.0e-26 122.9 119 48.7
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 2.0e-26 122.9 115 51.3
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 3.4e-26 122.1 110 52.7
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 4.5e-26 121.7 119 48.7
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 5.8e-26 121.3 109 53.2
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 5.8e-26 121.3 122 46.7
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 5.8e-26 121.3 113 50.4
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 7.6e-26 120.9 119 48.7
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 7.6e-26 120.9 119 46.2
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 9.9e-26 120.6 109 51.4
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 9.9e-26 120.6 113 50.4
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 9.9e-26 120.6 122 50.8
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 9.9e-26 120.6 116 50.9
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 1.3e-25 120.2 118 49.2
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.3e-25 120.2 119 49.6
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.7e-25 119.8 121 45.5
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 2.2e-25 119.4 112 50.9
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 2.2e-25 119.4 116 50.9
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 2.2e-25 119.4 121 47.1
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 2.9e-25 119.0 119 47.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.9e-25 119.0 121 45.5
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 3.8e-25 118.6 112 50.0
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 3.8e-25 118.6 119 48.7
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 3.8e-25 118.6 121 48.8
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 3.8e-25 118.6 119 47.1
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 4.9e-25 118.2 109 50.5
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 4.9e-25 118.2 109 50.5
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 4.9e-25 118.2 109 50.5
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 4.9e-25 118.2 121 50.4
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 6.4e-25 117.9 128 46.9
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 6.4e-25 117.9 112 48.2
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 6.4e-25 117.9 121 47.1
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 6.4e-25 117.9 121 48.8
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 6.4e-25 117.9 119 48.7
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 8.4e-25 117.5 121 49.6
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 8.4e-25 117.5 104 51.9
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 8.4e-25 117.5 119 48.7
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 8.4e-25 117.5 119 48.7
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 8.4e-25 117.5 112 50.0
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 8.4e-25 117.5 120 45.8
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 8.4e-25 117.5 119 46.2
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.1e-24 117.1 122 45.9
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 1.4e-24 116.7 109 49.5
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.4e-24 116.7 124 50.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.9e-24 116.3 109 49.5
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.9e-24 116.3 121 48.8
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 1.9e-24 116.3 121 46.3
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.9e-24 116.3 118 45.8
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 2.4e-24 115.9 119 47.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.2e-24 115.5 121 49.6
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 3.2e-24 115.5 119 47.1
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 3.2e-24 115.5 112 49.1
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 5.5e-24 114.8 125 42.4
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 5.5e-24 114.8 112 46.4
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 5.5e-24 114.8 122 45.9
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 5.5e-24 114.8 119 46.2
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 7.1e-24 114.4 122 45.9
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 7.1e-24 114.4 117 49.6
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 9.3e-24 114.0 112 48.2
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 1.2e-23 113.6 109 48.6
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 1.2e-23 113.6 121 48.8
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.6e-23 113.2 119 46.2
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.6e-23 113.2 119 44.5
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.6e-23 113.2 119 45.4
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.1e-23 112.8 122 41.8
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 2.1e-23 112.8 119 45.4
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.7e-23 112.5 112 48.2
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 2.7e-23 112.5 121 43.8
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.7e-23 112.5 119 45.4
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.5e-23 112.1 121 43.8
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 3.5e-23 112.1 119 45.4
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 3.5e-23 112.1 117 46.2
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 6.0e-23 111.3 112 48.2
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 6.0e-23 111.3 112 47.3
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.0e-22 110.5 121 43.8
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.0e-22 110.5 112 48.2
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.0e-22 110.5 122 45.9
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.8e-22 109.8 98 55.1
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 5.1e-22 108.2 118 44.9
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 5.1e-22 108.2 97 53.6
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.9e-21 106.3 139 42.4
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.3e-21 105.1 122 42.6
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 2.1e-20 102.8 151 35.8
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 2.8e-20 102.4 81 61.7
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.5e-18 96.7 96 50.0
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.4e-18 95.5 83 51.8
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.0e-17 94.0 95 50.5
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.7e-17 93.2 91 50.5
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 4.2e-16 88.6 79 53.2
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 4.2e-16 88.6 100 43.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 7.1e-16 87.8 89 48.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 6.0e-15 84.7 91 49.5
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 7.9e-15 84.3 88 45.5
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.3e-14 83.6 91 44.0
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.0e-14 82.4 91 44.0
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 4.3e-13 78.6 144 35.4
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.1e-11 73.9 54 59.3


User provided reference genes

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