Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 4.0e-246 854.4 440 100.0
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 3.9e-84 316.2 387 44.7
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 8.4e-79 298.5 424 42.0
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.2e-78 296.6 406 42.4
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 3.8e-63 246.5 391 38.9
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 8.4e-63 245.4 424 37.7
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 6.0e-61 239.2 392 38.5
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.9e-60 236.5 391 38.9
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 6.7e-60 235.7 393 39.2
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 6.7e-60 235.7 395 37.5
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.1e-59 235.0 395 38.7
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.9e-59 234.2 413 37.3
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 2.5e-59 233.8 393 38.4
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 2.5e-59 233.8 388 37.4
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 3.3e-59 233.4 468 36.1
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 4.3e-59 233.0 389 38.6
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 5.6e-59 232.6 408 37.5
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 7.4e-59 232.3 394 38.8
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 7.4e-59 232.3 389 38.8
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 7.4e-59 232.3 387 37.7
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 9.6e-59 231.9 391 35.8
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 9.6e-59 231.9 400 37.2
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 9.6e-59 231.9 390 36.4
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 1.3e-58 231.5 393 37.4
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 1.6e-58 231.1 405 38.8
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.1e-58 230.7 389 38.8
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.1e-58 230.7 393 38.4
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.1e-58 230.7 379 36.9
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 2.8e-58 230.3 396 38.9
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 2.8e-58 230.3 389 38.8
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 2.8e-58 230.3 408 37.3
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 6.2e-58 229.2 402 34.8
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 6.2e-58 229.2 387 37.2
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 6.2e-58 229.2 392 37.0
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 8.1e-58 228.8 389 39.1
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 8.1e-58 228.8 389 38.6
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 8.1e-58 228.8 392 37.2
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 1.1e-57 228.4 389 38.6
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 1.1e-57 228.4 389 38.6
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.1e-57 228.4 392 36.7
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.1e-57 228.4 390 39.0
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 1.1e-57 228.4 401 37.4
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-57 228.0 393 37.9
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-57 228.0 393 38.2
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 1.8e-57 227.6 394 37.6
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 3.1e-57 226.9 385 38.2
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 3.1e-57 226.9 395 38.2
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 3.1e-57 226.9 389 36.8
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 3.1e-57 226.9 386 37.3
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 3.1e-57 226.9 416 35.3
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 5.3e-57 226.1 389 39.3
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 5.3e-57 226.1 393 36.6
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 5.3e-57 226.1 395 37.0
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 9.0e-57 225.3 390 38.7
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 9.0e-57 225.3 396 36.4
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 3.4e-56 223.4 392 36.7
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 3.4e-56 223.4 394 36.8
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 4.5e-56 223.0 388 38.7
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 4.5e-56 223.0 391 36.3
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 5.8e-56 222.6 390 37.7
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.3e-55 221.5 390 37.9
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 1.3e-55 221.5 393 35.9
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 1.3e-55 221.5 390 37.7
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 1.7e-55 221.1 391 38.1
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 2.9e-55 220.3 396 38.1
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 3.8e-55 219.9 390 35.1
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 4.9e-55 219.5 391 38.1
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 6.5e-55 219.2 400 35.5
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 8.4e-55 218.8 391 36.6
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 1.4e-54 218.0 360 37.5
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.4e-54 218.0 337 38.6
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 1.9e-54 217.6 391 37.3
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.2e-54 216.5 399 35.3
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 4.2e-54 216.5 393 36.4
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 5.5e-54 216.1 389 36.5
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 5.5e-54 216.1 400 36.0
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 5.5e-54 216.1 391 36.3
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.2e-53 214.9 390 35.9
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.6e-53 214.5 398 35.7
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.6e-53 214.5 366 38.5
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 3.5e-53 213.4 392 36.7
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 3.5e-53 213.4 392 36.7
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 4.6e-53 213.0 403 35.2
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 4.6e-53 213.0 391 35.5
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.0e-52 211.8 391 35.5
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 3.0e-52 210.3 394 36.3
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 3.0e-52 210.3 370 37.8
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 1.1e-51 208.4 391 35.5
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.1e-51 208.4 410 34.9
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.5e-51 208.0 410 34.9
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 7.4e-51 205.7 394 34.8
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 7.4e-51 205.7 399 32.8
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.1e-50 204.1 359 36.2
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 3.7e-50 203.4 415 33.3
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 8.2e-50 202.2 398 36.2
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.1e-49 201.8 390 35.1
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.4e-49 201.4 394 33.5
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 1.8e-49 201.1 394 36.0
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 9.0e-49 198.7 396 35.9
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 3.8e-47 193.4 365 35.6
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 8.4e-47 192.2 401 32.7
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 1.9e-46 191.0 342 38.3
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 4.2e-46 189.9 380 34.2
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 1.6e-45 188.0 394 34.8
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 4.6e-45 186.4 276 42.0
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 6.1e-45 186.0 389 34.7
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 7.9e-45 185.7 322 36.6
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.0e-44 185.3 369 34.1
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 2.5e-43 180.6 324 36.7
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 1.4e-41 174.9 345 35.4
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.8e-41 174.5 401 32.7
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 7.7e-40 169.1 295 36.6
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 1.1e-38 165.2 343 34.1
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 2.7e-37 160.6 167 49.7
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 5.1e-36 156.4 327 35.5
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 4.3e-35 153.3 390 30.8
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 2.9e-31 140.6 199 37.2
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 8.8e-28 129.0 422 27.7
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 3.7e-26 123.6 349 29.2
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 1.1e-25 122.1 399 27.1
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 1.2e-24 118.6 188 36.2
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 2.9e-23 114.0 202 32.7
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 8.5e-23 112.5 248 33.9
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 2.5e-22 110.9 166 37.3
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 5.5e-22 109.8 251 33.5
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.0e-20 103.6 400 27.8
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.0e-11 74.7 148 30.4
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 7.5e-11 72.8 227 31.3


User provided reference genes

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