Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 0.0e+00 3737.2 1925 100.0
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 1.1e-244 851.7 1944 32.7
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 2.5e-236 823.9 1947 32.4
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 8.9e-234 815.5 1962 31.5
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 2.6e-233 813.9 1936 30.9
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 4.4e-233 813.1 1942 31.3
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 9.2e-231 805.4 1949 31.0
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 2.7e-230 803.9 1949 31.1
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 1.3e-229 801.6 1955 32.2
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 5.1e-229 799.7 1950 31.3
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 1.1e-228 798.5 1949 31.0
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 1.5e-228 798.1 1951 31.1
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 1.9e-228 797.7 1943 31.4
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 3.3e-228 797.0 1948 31.1
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 4.3e-228 796.6 1948 31.2
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 9.5e-228 795.4 1966 31.3
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 1.2e-227 795.0 1958 31.6
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 2.1e-227 794.3 1946 31.0
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 6.2e-227 792.7 1958 31.3
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 6.2e-227 792.7 1910 31.4
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 1.8e-226 791.2 1954 30.9
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 2.3e-226 790.8 1942 31.1
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 4.0e-226 790.0 1959 32.0
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 1.5e-225 788.1 1947 31.5
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 1.3e-224 785.0 1939 30.7
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 1.3e-224 785.0 1775 32.7
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 5.4e-223 779.6 1950 31.0
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 7.8e-222 775.8 1960 31.4
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 1.0e-221 775.4 1938 30.9
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 3.0e-221 773.9 1950 31.1
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 3.0e-221 773.9 1952 31.2
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 3.9e-221 773.5 1951 31.4
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 2.1e-219 767.7 1953 30.3
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 2.1e-219 767.7 1948 30.7
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.4e-218 765.0 2051 30.7
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 2.4e-218 764.2 1947 31.2
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 4.9e-216 756.5 1953 30.6
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 6.4e-216 756.1 1952 30.5
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 8.4e-216 755.7 1957 30.4
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 1.1e-215 755.4 1952 31.1
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 5.4e-215 753.1 1947 30.7
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 3.5e-214 750.4 1940 30.0
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 3.9e-213 746.9 1956 31.3
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 5.1e-213 746.5 1944 31.0
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 3.3e-212 743.8 1963 30.4
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 4.3e-212 743.4 1943 31.0
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 3.6e-211 740.3 1937 30.7
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 1.1e-210 738.8 1982 30.4
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 1.8e-210 738.0 1936 30.3
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 1.8e-210 738.0 1936 30.3
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 1.8e-210 738.0 1936 30.3
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 3.1e-210 737.3 1943 30.6
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 9.0e-210 735.7 1938 30.5
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 9.0e-210 735.7 1944 30.5
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.5e-209 734.9 1969 30.7
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 3.4e-209 733.8 1939 30.3
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 1.4e-207 728.4 2037 29.1
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 1.9e-207 728.0 1945 30.1
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.1e-206 724.5 1953 30.1
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.6e-203 714.9 1947 29.6
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 6.2e-203 713.0 1782 30.8
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 2.4e-202 711.1 2081 29.2
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 4.0e-202 710.3 2089 29.4
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 1.5e-201 708.4 1969 29.2
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 4.2e-199 700.3 1948 30.1
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 5.5e-199 699.9 1950 29.2
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 1.3e-197 695.3 2123 28.5
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 8.2e-195 686.0 1961 29.5
CSS0029677 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 1.1e-194 685.6 1588 32.6
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 2.0e-193 681.4 1745 30.8
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 1.4e-191 675.2 1937 28.8
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 4.2e-191 673.7 1804 30.0
CSS0006564 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 5.1e-189 666.8 1519 32.6
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 1.6e-187 661.8 1940 29.4
Gohir.D09G028100 Gossypium hirsutum HOM05D004010 ORTHO05D004995 1.6e-187 661.8 1780 29.9
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 2.8e-187 661.0 2018 28.7
Ciclev10014033m.g Citrus clementina HOM05D004010 ORTHO05D004995 1.0e-184 652.5 1571 31.8
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 8.8e-181 639.4 1942 28.8
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 7.4e-180 636.3 1944 28.0
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 2.4e-178 631.3 2036 27.7
CAN.G473.4 Capsicum annuum HOM05D004010 ORTHO05D004995 2.1e-174 618.2 1413 32.5
Zm00001eb123050 Zea mays HOM05D004010 ORTHO05D004995 2.6e-172 611.3 1958 27.9
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 3.0e-165 587.8 2143 26.7
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 8.2e-163 579.7 1383 31.1
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 1.3e-160 572.4 1945 27.2
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 8.0e-158 563.1 1966 27.7
PGSC0003DMG400012627 Solanum tuberosum HOM05D004010 ORTHO05D004995 5.7e-156 557.0 1293 32.1
Oeu006813.1 Olea europaea HOM05D004010 ORTHO05D004995 1.8e-149 535.4 1361 30.2
MBI10_g32033_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 1.1e-146 526.2 1441 30.2
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 2.8e-139 501.5 1945 26.0
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 2.3e-133 481.9 1194 31.5
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 1.0e-112 413.3 1011 31.4
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 2.8e-110 405.2 940 31.7
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 1.3e-99 369.8 878 31.8
Atru.chr6.2370 Acer truncatum HOM05D004010 ORTHO05D004995 4.2e-98 364.8 670 37.6
Hund06718 Selenicereus undatus HOM05D004010 ORTHO05D004995 6.0e-97 360.9 1087 29.4
CBR_g19445 Chara braunii HOM05D004010 ORTHO05D004995 6.9e-93 347.4 1189 26.7
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 2.9e-83 315.5 737 31.2
Lju41A39T81 Lonicera japonica HOM05D004010 ORTHO05D004995 3.5e-81 308.5 886 30.0
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 6.2e-78 297.7 935 28.0
CDE05G1248 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.9e-66 259.6 837 26.8
Phvul.004G009761 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.1e-65 256.1 661 30.4
CBR_g19447 Chara braunii HOM05D004010 ORTHO05D004995 1.8e-61 243.0 926 26.3
Actinidia36109 Actinidia chinensis HOM05D004010 ORTHO05D004995 9.1e-61 240.7 689 30.0
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 2.6e-60 239.2 633 29.9
COL.COLO4_29096 Corchorus olitorius HOM05D004010 ORTHO05D004995 4.2e-58 231.9 558 32.4
Phvul.004G009161 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 3.6e-57 228.8 628 29.9
SEGI_20333 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 6.1e-57 228.0 457 33.9
Cpa.g.sc108.58 Carica papaya HOM05D004010 ORTHO05D004995 5.7e-55 221.5 452 34.7
Phvul.004G009118 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 2.2e-54 219.5 389 37.8
vmacro05456 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.4e-53 216.9 873 27.4
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 3.5e-52 212.2 646 28.9
CDE05G1902 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 6.5e-51 208.0 350 38.9
Phvul.004G009536 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 5.5e-50 204.9 566 29.7
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.2e-44 187.2 608 28.1
Cc07_g01810 Coffea canephora HOM05D004010 ORTHO05D004995 2.7e-41 176.0 451 31.5
Sopen00g011090 Solanum pennellii HOM05D004010 ORTHO05D004995 4.4e-39 168.7 413 31.5
Phvul.007G113156 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 7.0e-37 161.4 332 32.2
Prupe.3G290500 Prunus persica HOM05D004010 ORTHO05D004995 9.4e-34 151.0 450 29.8
Phvul.004G009109 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.4e-29 137.1 411 28.5
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 3.5e-28 132.5 397 27.7
Ciclev10017517m.g Citrus clementina HOM05D004010 ORTHO05D004995 8.6e-27 127.9 348 30.2
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla HOM05D004010 ORTHO05D004995 2.1e-25 123.2 157 39.5
vmacro05455 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 4.7e-25 122.1 365 27.4
Sopen00g012710 Solanum pennellii HOM05D004010 ORTHO05D004995 1.5e-23 117.1 273 30.4
CSS0021155 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.0e-23 116.7 157 39.5
Atru.chr6.2368 Acer truncatum HOM05D004010 ORTHO05D004995 2.6e-23 116.3 208 34.6
unitig_0.g541 Utricularia gibba HOM05D004010 ORTHO05D004995 4.4e-23 115.5 346 28.3
Atru.chr6.2275 Acer truncatum HOM05D004010 ORTHO05D004995 9.8e-23 114.4 180 36.7
CAN.G473.5 Capsicum annuum HOM05D004010 ORTHO05D004995 2.4e-21 109.8 115 46.1
Psat2g096200 Pisum sativum HOM05D004010 ORTHO05D004995 2.9e-19 102.8 304 29.9
SEGI_32252 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 3.3e-18 99.4 72 65.3
FAN14G2166 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.7e-17 95.5 132 40.9
Phvul.004G009701 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.8e-16 93.6 195 35.9
MBI10_g46391_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 8.9e-16 91.3 293 27.3
Atru.chr6.2279 Acer truncatum HOM05D004010 ORTHO05D004995 8.3e-14 84.7 145 35.2
HPP92_004912 Vanilla planifolia HOM05D004010 ORTHO05D004995 3.2e-13 82.8 141 36.2
Phvul.004G009127 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 9.2e-13 81.3 111 37.8
CSS0026540 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 1.6e-12 80.5 379 23.5
FvH4_6g51560 Fragaria vesca HOM05D004010 ORTHO05D004995 2.7e-12 79.7 123 34.1
MBI10_g39276_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 3.5e-12 79.3 210 29.0
Ah.06g187170 Amaranthus hybridus HOM05D004010 ORTHO05D004995 6.0e-12 78.6 114 38.6
Gohir.A09G028500 Gossypium hirsutum HOM05D004010 ORTHO05D004995 1.7e-11 77.0 471 22.3
FAN14G1049 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.5e-10 73.2 116 34.5
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 3.3e-10 72.8 129 33.3
Atru.chr6.2281 Acer truncatum HOM05D004010 ORTHO05D004995 2.1e-09 70.1 139 34.5
Atru.chr6.2371 Acer truncatum HOM05D004010 ORTHO05D004995 2.8e-09 69.7 161 28.0
FvH4_5g31861 Fragaria vesca HOM05D004010 ORTHO05D046033 1.8e-08 67.0 81 39.5
FAN05G1652 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.8e-08 67.0 210 27.6
FvH4_6g51541 Fragaria vesca HOM05D004010 ORTHO05D004995 4.0e-08 65.9 63 47.6
MBI10_g38112_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 1.2e-07 64.3 309 25.6
TPR.G14087 Trifolium pratense HOM05D004010 ORTHO05D004995 1.5e-07 63.9 52 59.6
Actinidia15573 Actinidia chinensis HOM05D004010 ORTHO05D004995 2.0e-07 63.5 188 29.3
FvH4_6g51540 Fragaria vesca HOM05D004010 ORTHO05D004995 1.7e-06 60.5 94 33.0
RcHm_v2.0_Chr5g0081041 Rosa chinensis HOM05D004010 ORTHO05D004995 1.7e-06 60.5 175 26.3
Atru.chr6.2280 Acer truncatum HOM05D004010 ORTHO05D004995 2.9e-06 59.7 103 39.8


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