Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 3.4e-147 525.0 270 100.0
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 1.5e-54 217.2 220 52.3
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 3.5e-51 206.1 180 55.0
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 2.2e-50 203.4 252 46.4
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 6.5e-50 201.8 177 53.1
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 8.5e-50 201.4 180 53.9
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 1.5e-49 200.7 180 53.9
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 2.5e-49 199.9 184 52.7
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 3.2e-49 199.5 179 53.1
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 7.2e-49 198.4 184 51.1
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 9.4e-49 198.0 184 53.3
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 1.6e-48 197.2 184 50.5
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 1.6e-48 197.2 181 53.6
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 2.1e-48 196.8 181 50.3
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 2.7e-48 196.4 182 51.1
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 2.7e-48 196.4 214 47.7
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 2.7e-48 196.4 180 52.2
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 2.7e-48 196.4 251 44.6
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 3.6e-48 196.1 181 50.8
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 4.7e-48 195.7 184 50.0
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 6.1e-48 195.3 184 50.5
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 6.1e-48 195.3 184 50.5
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 6.1e-48 195.3 181 51.4
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 6.1e-48 195.3 220 47.7
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 6.1e-48 195.3 225 46.2
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 1.0e-47 194.5 180 51.1
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 1.0e-47 194.5 221 45.2
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 1.0e-47 194.5 199 48.2
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 1.0e-47 194.5 179 51.4
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 1.0e-47 194.5 230 46.5
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 1.4e-47 194.1 224 45.1
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 1.8e-47 193.7 244 44.7
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 1.8e-47 193.7 180 51.7
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 3.0e-47 193.0 254 42.5
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 3.0e-47 193.0 180 50.6
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 4.0e-47 192.6 180 51.1
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.0e-47 192.6 180 51.1
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 4.0e-47 192.6 180 51.1
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 4.0e-47 192.6 210 47.1
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 5.2e-47 192.2 236 44.1
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 6.8e-47 191.8 262 41.6
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 6.8e-47 191.8 223 43.9
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 8.8e-47 191.4 218 43.1
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 1.5e-46 190.7 184 49.5
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 1.5e-46 190.7 228 45.2
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.5e-46 190.7 202 45.0
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 1.5e-46 190.7 184 50.0
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.0e-46 190.3 180 50.6
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.0e-46 190.3 180 50.0
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 2.0e-46 190.3 239 45.6
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 2.6e-46 189.9 231 46.8
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 2.6e-46 189.9 178 50.0
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 3.4e-46 189.5 200 46.5
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 3.4e-46 189.5 178 50.6
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 5.7e-46 188.7 201 48.3
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 7.5e-46 188.3 199 44.2
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 7.5e-46 188.3 267 41.9
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 7.5e-46 188.3 253 44.3
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 7.5e-46 188.3 184 47.8
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 9.8e-46 188.0 253 44.3
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 9.8e-46 188.0 239 44.8
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 9.8e-46 188.0 270 40.0
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 1.3e-45 187.6 248 42.7
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 1.3e-45 187.6 252 41.7
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 1.3e-45 187.6 195 48.2
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 2.2e-45 186.8 180 47.8
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 2.2e-45 186.8 249 43.4
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 2.8e-45 186.4 183 47.0
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 3.7e-45 186.0 166 54.8
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 3.7e-45 186.0 181 49.2
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 4.9e-45 185.7 261 41.0
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 4.9e-45 185.7 260 42.7
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 4.9e-45 185.7 183 48.6
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 4.9e-45 185.7 181 49.2
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 6.3e-45 185.3 180 46.7
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 1.1e-44 184.5 207 45.4
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 1.1e-44 184.5 225 43.1
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.4e-44 184.1 180 47.2
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 1.8e-44 183.7 228 43.9
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 3.1e-44 183.0 178 48.9
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 3.1e-44 183.0 181 48.6
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 5.4e-44 182.2 221 44.3
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 7.0e-44 181.8 180 46.7
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 9.1e-44 181.4 247 42.5
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 9.1e-44 181.4 207 46.4
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 1.2e-43 181.0 207 44.9
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 2.7e-43 179.9 258 41.5
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.5e-43 179.5 208 42.8
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 3.5e-43 179.5 204 43.6
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 4.5e-43 179.1 240 42.5
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 4.5e-43 179.1 185 49.2
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 1.3e-42 177.6 176 50.6
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 3.8e-42 176.0 166 49.4
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 5.0e-42 175.6 256 42.2
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 6.6e-42 175.3 253 41.1
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 8.6e-42 174.9 210 41.4
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 1.5e-41 174.1 173 49.1
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.3e-39 166.8 224 43.3
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 5.2e-39 165.6 174 44.8
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 5.2e-39 165.6 153 48.4
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 8.9e-39 164.9 215 40.0
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.2e-35 154.5 186 43.0
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.0e-34 151.4 180 44.4
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 3.9e-34 149.4 178 43.3
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 1.5e-33 147.5 206 40.8
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 3.4e-30 136.3 258 38.0
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 2.0e-27 127.1 124 46.8
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.5e-22 110.9 93 55.9
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 2.4e-20 103.6 202 34.2
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 7.8e-19 98.6 198 33.8
MD14G1232300 Malus domestica HOM05D006376 ORTHO05D008046 1.2e-16 91.3 117 44.4
Thecc.03G047400 Theobroma cacao HOM05D006376 ORTHO05D008046 5.2e-15 85.9 94 47.9
Hma1.2p1_0660F.1_g197690 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 1.9e-09 67.4 61 50.8
Rhsim07G0070600 Rhododendron simsii HOM05D006376 ORTHO05D008046 4.3e-09 66.2 106 37.7
SMO170G0025 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 4.0e-07 59.7 72 44.4
SMO137G0132 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 5.2e-07 59.3 112 37.5
SEGI_17791 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 2.0e-06 57.4 57 49.1
arahy.Tifrunner.gnm1.ann1.8TB400 Arachis hypogaea HOM05D006376 ORTHO05D008046 5.8e-06 55.8 55 50.9
arahy.Tifrunner.gnm1.ann1.FQ3MGU Arachis hypogaea HOM05D006376 ORTHO05D008046 9.9e-06 55.1 55 50.9


User provided reference genes

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