Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0297 Marchantia polymorpha HOM05D019157 ORTHO05D018320 5.5e-259 897.1 451 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1563 Anthoceros agrestis HOM05D019157 ORTHO05D018320 1.6e-146 523.5 462 56.9
PRCOL_00001318 Prasinoderma coloniale HOM05D019157 ORTHO05D018320 5.0e-111 405.6 452 49.1
Cre12.g541750 Chlamydomonas reinhardtii HOM05D019157 ORTHO05D018320 6.1e-109 398.7 480 46.0
MCO04G003 Micromonas commoda HOM05D019157 ORTHO05D018320 2.3e-100 370.2 473 43.3
Cfa024408 Carpinus fangiana HOM05D019157 ORTHO05D018320 6.4e-66 255.8 446 34.8
Gohir.A02G165600 Gossypium hirsutum HOM05D004251 ORTHO05D005010 5.9e-11 73.2 343 23.3
Gohir.D03G014400 Gossypium hirsutum HOM05D004251 ORTHO05D005010 5.0e-10 70.1 343 23.3
GSVIVG01018957001 Vitis vinifera HOM05D004251 ORTHO05D005010 5.0e-10 70.1 346 24.9
AUR62038430 Chenopodium quinoa HOM05D006126 ORTHO05D007792 6.5e-10 69.7 331 24.5
Cre16.g651923 Chlamydomonas reinhardtii HOM05D006126 ORTHO05D007792 6.5e-10 69.7 343 24.5
THA.LOC104821560 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 1.1e-09 68.9 343 23.9
ATR0733G178 Amborella trichopoda HOM05D004251 ORTHO05D005010 1.4e-09 68.6 339 25.7
AUR62036324 Chenopodium quinoa HOM05D006126 ORTHO05D007792 1.9e-09 68.2 331 24.2
Mapoly0014s0043 Marchantia polymorpha HOM05D004251 ORTHO05D005010 1.9e-09 68.2 354 26.3
SEGI_19545 Sequoiadendron giganteum HOM05D004251 ORTHO05D005010 1.9e-09 68.2 345 23.2
THA.LOC104821294 Tarenaya hassleriana HOM05D004251 ORTHO05D005010 1.9e-09 68.2 343 23.9
MSTRG.2762 Avicennia marina HOM05D004251 ORTHO05D005010 3.2e-09 67.4 344 25.9
PGR102G3108 Punica granatum HOM05D004251 ORTHO05D005010 4.2e-09 67.0 345 24.9
Sed0021773 Sechium edule HOM05D004251 ORTHO05D005010 7.2e-09 66.2 356 24.7
CANSAT01G2654 Cannabis sativa HOM05D004251 ORTHO05D005010 1.2e-08 65.5 347 23.3
Pp3c15_20190 Physcomitrium patens HOM05D004251 ORTHO05D005010 1.2e-08 65.5 349 22.1
CsaV3_4G005780 Cucumis sativus L. HOM05D004251 ORTHO05D005010 1.6e-08 65.1 354 24.0
Phvul.003G253700 Phaseolus vulgaris HOM05D004251 ORTHO05D005010 2.7e-08 64.3 346 24.6
Medtr8g077580 Medicago truncatula HOM05D004251 ORTHO05D005010 4.6e-08 63.5 343 23.6
CiPaw.01G038300 Carya illinoinensis HOM05D004251 ORTHO05D005010 6.1e-08 63.2 344 24.1
Ciclev10025284m.g Citrus clementina HOM05D004251 ORTHO05D005010 6.1e-08 63.2 343 23.6
MELO3C016373.2 Cucumis melo HOM05D004251 ORTHO05D005010 6.1e-08 63.2 361 23.3
ECA232G3289 Erigeron canadensis HOM05D004251 ORTHO05D005010 7.9e-08 62.8 349 25.5
Glyma.16G139600 Glycine max HOM05D004251 ORTHO05D005010 7.9e-08 62.8 343 23.3
Psat4g093160 Pisum sativum HOM05D004251 ORTHO05D005010 7.9e-08 62.8 344 23.8
Ca_22268_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.0e-07 62.4 343 23.9
Ca_22281_v3 Cicer arietinum L. HOM05D004251 ORTHO05D005010 1.0e-07 62.4 343 23.9
unitig_21.g20954 Utricularia gibba HOM05D004251 ORTHO05D005010 1.4e-07 62.0 337 25.5
Psat4g093040 Pisum sativum HOM05D004251 ORTHO05D005010 3.0e-07 60.8 343 23.3
PGR102G0408 Punica granatum HOM05D004251 ORTHO05D005010 3.0e-07 60.8 353 23.8
VMungo0251G3189 Vigna mungo HOM05D004251 ORTHO05D005010 3.0e-07 60.8 343 23.6
CSS0001427 Camellia sinensis var. sinensis HOM05D001829 ORTHO05D007093 4.3e-06 57.0 287 25.4
ATR1136G103 Amborella trichopoda HOM05D001829 ORTHO05D007093 7.4e-06 56.2 286 25.2
Duzib093G1994 Durio zibethinus HOM05D006126 ORTHO05D007792 7.4e-06 56.2 342 22.5


User provided reference genes

Program Settings