Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 8.8e-159 563.5 279 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 3.6e-51 206.1 131 72.5
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 5.7e-49 198.7 290 44.8
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 1.7e-48 197.2 155 65.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 8.3e-48 194.9 289 43.6
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 8.3e-48 194.9 289 43.9
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 8.3e-48 194.9 289 45.0
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 8.3e-48 194.9 152 65.8
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.8e-47 193.7 289 43.9
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 3.1e-47 193.0 148 64.2
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 4.1e-47 192.6 149 63.8
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 4.1e-47 192.6 149 63.8
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 5.4e-47 192.2 150 64.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 9.1e-47 191.4 281 44.8
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.2e-46 191.0 120 74.2
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 1.2e-46 191.0 300 42.7
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 1.6e-46 190.7 152 61.8
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.6e-46 190.7 120 74.2
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 1.6e-46 190.7 120 73.3
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 2.0e-46 190.3 291 44.0
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 2.0e-46 190.3 280 44.6
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 2.7e-46 189.9 137 66.4
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 2.7e-46 189.9 292 43.2
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.7e-46 189.9 137 64.2
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 3.5e-46 189.5 137 66.4
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 5.9e-46 188.7 120 75.0
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 5.9e-46 188.7 120 73.3
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 5.9e-46 188.7 120 74.2
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 7.7e-46 188.3 137 69.3
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 7.7e-46 188.3 120 73.3
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 7.7e-46 188.3 120 72.5
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 1.0e-45 188.0 163 58.3
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 1.0e-45 188.0 120 73.3
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 1.0e-45 188.0 135 68.1
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 1.3e-45 187.6 135 64.4
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 1.3e-45 187.6 135 64.4
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 1.3e-45 187.6 120 72.5
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 1.3e-45 187.6 142 63.4
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 1.7e-45 187.2 128 68.0
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 1.7e-45 187.2 287 46.0
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 2.3e-45 186.8 120 72.5
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 2.3e-45 186.8 137 65.0
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 2.3e-45 186.8 120 71.7
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 2.3e-45 186.8 126 70.6
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 2.9e-45 186.4 120 70.0
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 2.9e-45 186.4 137 65.0
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 3.8e-45 186.0 120 72.5
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 3.8e-45 186.0 120 70.0
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 5.0e-45 185.7 290 41.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 5.0e-45 185.7 285 41.1
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 6.5e-45 185.3 120 71.7
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 6.5e-45 185.3 285 41.1
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 1.1e-44 184.5 275 44.4
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 1.1e-44 184.5 120 70.8
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 1.5e-44 184.1 138 62.3
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 1.5e-44 184.1 135 63.7
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 1.5e-44 184.1 291 41.9
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.9e-44 183.7 135 63.7
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 1.9e-44 183.7 285 40.7
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 5.5e-44 182.2 120 72.5
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.5e-44 182.2 270 42.6
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 5.5e-44 182.2 270 42.6
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 9.5e-44 181.4 271 42.4
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 9.5e-44 181.4 283 41.3
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 9.5e-44 181.4 268 44.4
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 1.6e-43 180.6 132 63.6
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 2.1e-43 180.3 136 64.0
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 2.1e-43 180.3 300 41.0
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 3.6e-43 179.5 273 41.0
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 4.7e-43 179.1 106 77.4
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 4.7e-43 179.1 287 41.8
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 1.4e-42 177.6 300 40.0
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 1.8e-42 177.2 279 40.5
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 5.2e-42 175.6 280 39.3
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 5.2e-42 175.6 117 70.1
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 6.8e-42 175.3 234 43.6
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 6.8e-42 175.3 122 68.9
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.5e-41 174.1 167 53.3
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 2.6e-41 173.3 304 41.4
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 3.4e-41 172.9 135 63.0
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 7.5e-41 171.8 108 71.3
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 2.8e-40 169.9 133 61.7
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 3.7e-40 169.5 239 43.9
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 4.9e-40 169.1 126 63.5
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 4.9e-40 169.1 111 71.2
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 6.3e-40 168.7 106 72.6
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 8.3e-40 168.3 111 71.2
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 3.1e-39 166.4 138 60.1
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 3.1e-39 166.4 99 80.8
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 9.2e-39 164.9 271 40.2
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 9.2e-39 164.9 280 40.4
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.0e-38 163.7 144 57.6
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 2.0e-38 163.7 111 67.6
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 3.5e-38 162.9 140 60.0
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 7.8e-38 161.8 162 52.5
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.6e-35 154.1 99 71.7
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 6.8e-34 148.7 88 77.3
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.7e-33 145.6 97 69.1
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 2.9e-32 143.3 94 70.2
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 1.2e-27 127.9 296 34.1
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 1.6e-27 127.5 94 63.8
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 1.2e-25 121.3 72 77.8
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 6.6e-21 105.5 98 57.1
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 3.4e-17 93.2 229 35.4
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 3.4e-09 66.6 96 42.7
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.7e-08 64.3 41 68.3


User provided reference genes

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