Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0107 Marchantia polymorpha HOM05D000939 ORTHO05D256882 1.4e-125 453.0 231 100.0
Pp3c16_7260 Physcomitrium patens HOM05D000939 ORTHO05D000745 1.1e-13 81.3 176 33.0
Cc06_g09810 Coffea canephora HOM05D000939 ORTHO05D000745 1.4e-13 80.9 188 28.2
ATR0315G036 Amborella trichopoda HOM05D000939 ORTHO05D000745 1.9e-13 80.5 176 33.0
MSTRG.9464 Avicennia marina HOM05D000939 ORTHO05D000745 2.1e-12 77.0 179 29.6
SMO367G0469 Selaginella moellendorffii HOM05D000939 ORTHO05D000745 3.5e-12 76.3 206 28.6
Cc04_g03110 Coffea canephora HOM05D000939 ORTHO05D000745 2.3e-11 73.6 145 30.3
Os01g0228500 Oryza sativa ssp. japonica HOM05D000939 ORTHO05D000745 1.5e-10 70.9 156 34.0
SEGI_01191 Sequoiadendron giganteum HOM05D000939 ORTHO05D000745 5.7e-10 68.9 175 26.3
Peaxi162Scf00078g01223 Petunia axillaris HOM05D000939 ORTHO05D000745 7.4e-10 68.6 180 28.9
PGSC0003DMG402002623 Solanum tuberosum HOM05D000939 ORTHO05D000745 7.4e-10 68.6 176 26.1
Zm00001eb271440 Zea mays HOM05D000939 ORTHO05D000745 7.4e-10 68.6 179 29.6
DCAR_026331 Daucus carota HOM05D000939 ORTHO05D000745 1.3e-09 67.8 145 27.6
TWI34G0159 Tripterygium wilfordii HOM05D000939 ORTHO05D000745 1.3e-09 67.8 166 27.7
GSVIVG01022116001 Vitis vinifera HOM05D000015 ORTHO05D000734 1.3e-09 67.8 201 26.9
Cpa.g.sc98.8 Carica papaya HOM05D000939 ORTHO05D000745 1.6e-09 67.4 154 31.8
DCAR_016215 Daucus carota HOM05D000939 ORTHO05D000745 2.2e-09 67.0 186 27.4
AUR62016473 Chenopodium quinoa HOM05D000939 ORTHO05D000745 3.7e-09 66.2 173 30.6
AUR62011645 Chenopodium quinoa HOM05D000939 ORTHO05D000745 4.8e-09 65.9 173 30.6
TPR.G10038 Trifolium pratense HOM05D000939 ORTHO05D000745 6.3e-09 65.5 198 26.8
Os06g0163300 Oryza sativa ssp. japonica HOM05D000939 ORTHO05D000745 1.1e-08 64.7 176 30.1
Aqoxy6G01840 Aquilegia oxysepala HOM05D000939 ORTHO05D000745 1.4e-08 64.3 183 27.3
AT3G24600 Arabidopsis thaliana HOM05D000939 ORTHO05D000745 1.4e-08 64.3 181 26.0
Sc08g0007490 Simmondsia chinensis HOM05D000939 ORTHO05D000745 1.4e-08 64.3 177 28.2
Solyc03g120710.2 Solanum lycopersicum HOM05D000939 ORTHO05D000745 1.8e-08 63.9 176 25.6
Sopen03g039530 Solanum pennellii HOM05D000939 ORTHO05D000745 1.8e-08 63.9 176 25.6
Aa31LG6G6420 Aethionema arabicum HOM05D000939 ORTHO05D000745 2.4e-08 63.5 175 25.1
EL10Ac9g22023 Beta vulgaris HOM05D000939 ORTHO05D000745 2.4e-08 63.5 173 30.6
Nitab4.5_0001315g0210 Nicotiana tabacum HOM05D000939 ORTHO05D000745 2.4e-08 63.5 176 23.9
Carub.0003s2498 Capsella rubella HOM05D000939 ORTHO05D000745 3.1e-08 63.2 157 26.1
AL3G40170 Arabidopsis lyrata HOM05D000939 ORTHO05D000745 4.1e-08 62.8 181 26.5
FAN28G2167 Fragaria x ananassa HOM05D000939 ORTHO05D000745 4.1e-08 62.8 173 27.7
COL.COLO4_17992 Corchorus olitorius HOM05D000939 ORTHO05D000745 5.3e-08 62.4 129 31.8
CANSAT56G3392 Cannabis sativa HOM05D000939 ORTHO05D000745 6.9e-08 62.0 146 26.7
Cc09_g10480 Coffea canephora HOM05D000939 ORTHO05D000745 9.0e-08 61.6 136 31.6
Prupe.3G068000 Prunus persica HOM05D000939 ORTHO05D000745 9.0e-08 61.6 178 25.3
Thhalv10002796m.g Eutrema salsugineum HOM05D000939 ORTHO05D000745 1.5e-07 60.8 181 25.4
SalBow2G0204 Salvia bowleyana HOM05D000939 ORTHO05D000745 1.5e-07 60.8 177 26.6
FvH4_1g16160 Fragaria vesca HOM05D000939 ORTHO05D000745 2.0e-07 60.5 173 27.7
FAN19G2094 Fragaria x ananassa HOM05D000939 ORTHO05D000745 2.0e-07 60.5 173 27.7
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 4.5e-07 59.3 174 26.4
FAN26G1115 Fragaria x ananassa HOM05D000939 ORTHO05D000745 5.9e-07 58.9 173 27.2
Lj2g0019175 Lotus japonicus HOM05D000939 ORTHO05D000745 5.9e-07 58.9 190 25.8
THA.LOC109116493 Tarenaya hassleriana HOM05D000939 ORTHO05D000745 5.9e-07 58.9 157 25.5
BcaB06g26665 Brassica carinata HOM05D000939 ORTHO05D000745 7.7e-07 58.5 186 25.3
DCAR_012783 Daucus carota HOM05D000939 ORTHO05D000745 7.7e-07 58.5 181 26.0
Nitab4.5_0008909g0030 Nicotiana tabacum HOM05D000939 ORTHO05D000745 7.7e-07 58.5 127 29.1
BcaC06g35731 Brassica carinata HOM05D000939 ORTHO05D000745 1.0e-06 58.2 186 25.3
A07p07670 Brassica napus HOM05D000939 ORTHO05D000745 1.0e-06 58.2 186 25.3
BolC7t41629H Brassica oleracea HOM05D000939 ORTHO05D000745 1.0e-06 58.2 186 25.3
BraA07t28560Z Brassica rapa HOM05D000939 ORTHO05D000745 1.0e-06 58.2 186 25.3
CANSAT25G0388 Cannabis sativa HOM05D000939 ORTHO05D000745 1.3e-06 57.8 149 28.2
CARHR100880 Cardamine hirsuta HOM05D000939 ORTHO05D000745 1.7e-06 57.4 175 26.3
Nitab4.5_0000097g0170 Nicotiana tabacum HOM05D000939 ORTHO05D000745 2.2e-06 57.0 203 22.2
Os02g0667600 Oryza sativa ssp. japonica HOM05D000939 ORTHO05D000745 2.2e-06 57.0 169 26.0
SEGI_01223 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 2.2e-06 57.0 201 23.4
SEGI_13769 Sequoiadendron giganteum HOM05D006916 ORTHO05D008756 2.2e-06 57.0 201 23.4
Thecc.02G051800 Theobroma cacao HOM05D000939 ORTHO05D000745 2.2e-06 57.0 129 31.8
Prupe.8G173100 Prunus persica HOM05D000939 ORTHO05D000745 2.9e-06 56.6 151 27.2


User provided reference genes

Program Settings