Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0089 Marchantia polymorpha HOM05D001846 ORTHO05D005785 0.0e+00 1772.3 958 100.0
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 2.0e-21 109.0 452 28.1
Pp3c6_6740 Physcomitrium patens HOM05D019331 ORTHO05D026050 7.3e-19 100.5 388 26.5
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 3.0e-12 78.6 377 25.5
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 6.6e-12 77.4 358 23.7
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 1.5e-11 76.3 377 27.1
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 9.5e-11 73.6 370 24.3
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 2.1e-10 72.4 362 25.7
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.1e-09 70.1 366 24.9
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 3.1e-09 68.6 485 24.9
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 3.1e-09 68.6 372 24.2
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 4.0e-09 68.2 368 23.9
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 1.2e-08 66.6 372 25.5
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 1.5e-08 66.2 359 23.1
AagrBONN_evm.TU.Sc2ySwM_228.2778 Anthoceros agrestis HOM05D019331 ORTHO05D005785 2.0e-08 65.9 87 40.2
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 2.0e-08 65.9 362 24.9
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 2.0e-08 65.9 368 23.6
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.6e-08 65.5 94 39.4
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 2.6e-08 65.5 97 38.1
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 3.4e-08 65.1 365 24.9
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 3.4e-08 65.1 372 25.3
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 5.8e-08 64.3 361 22.2
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 5.8e-08 64.3 96 35.4
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 7.6e-08 63.9 305 25.2
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 1.3e-07 63.2 366 24.0
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 1.7e-07 62.8 365 23.0
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 2.2e-07 62.4 92 35.9
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 2.9e-07 62.0 360 21.9
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 3.7e-07 61.6 117 31.6
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 3.7e-07 61.6 373 24.1
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 6.4e-07 60.8 92 33.7
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 6.4e-07 60.8 92 35.9
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 8.4e-07 60.5 316 25.9
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 1.1e-06 60.1 91 37.4
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 1.4e-06 59.7 368 23.6
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 1.4e-06 59.7 377 24.1
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 1.4e-06 59.7 377 24.1
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 1.9e-06 59.3 362 23.5
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.9e-06 59.3 95 35.8
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 2.4e-06 58.9 340 23.2
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 2.4e-06 58.9 83 38.6
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 3.2e-06 58.5 94 34.0
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 3.2e-06 58.5 332 25.9
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 4.1e-06 58.2 95 32.6
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 5.4e-06 57.8 91 36.3
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 5.4e-06 57.8 322 25.5
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 7.1e-06 57.4 91 35.2
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 9.2e-06 57.0 313 24.9
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 9.2e-06 57.0 348 25.0


User provided reference genes

Program Settings