Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 1.1e-170 603.2 297 100.0
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 5.6e-79 298.5 233 65.7
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 2.6e-76 289.7 192 69.8
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 1.7e-75 287.0 225 61.8
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 2.2e-75 286.6 222 63.1
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 2.9e-75 286.2 190 67.9
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 6.5e-75 285.0 198 66.2
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 6.5e-75 285.0 215 64.2
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 6.5e-75 285.0 211 63.5
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 1.1e-74 284.3 227 61.7
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 1.1e-74 284.3 223 62.3
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 1.4e-74 283.9 223 61.9
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 1.4e-74 283.9 223 62.3
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 1.9e-74 283.5 221 60.6
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 1.9e-74 283.5 189 70.4
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 5.5e-74 282.0 223 61.9
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 5.5e-74 282.0 215 60.9
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 7.1e-74 281.6 207 63.8
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 9.3e-74 281.2 217 63.1
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 9.3e-74 281.2 192 68.2
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 1.2e-73 280.8 220 62.7
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 1.6e-73 280.4 223 61.0
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 1.6e-73 280.4 223 61.9
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.6e-73 280.4 206 64.6
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 1.6e-73 280.4 223 61.9
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 2.1e-73 280.0 192 67.2
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 2.7e-73 279.6 223 61.0
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 2.7e-73 279.6 190 68.4
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 3.5e-73 279.3 194 67.5
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 3.5e-73 279.3 218 64.2
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 4.6e-73 278.9 223 59.6
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 4.6e-73 278.9 192 68.2
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 6.0e-73 278.5 195 65.6
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 6.0e-73 278.5 190 68.4
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 6.0e-73 278.5 209 62.2
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 7.9e-73 278.1 217 61.8
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 1.0e-72 277.7 212 62.7
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 1.0e-72 277.7 194 66.0
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 1.0e-72 277.7 238 56.3
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 1.3e-72 277.3 190 66.3
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 1.3e-72 277.3 190 67.9
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 2.3e-72 276.6 198 63.6
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 2.3e-72 276.6 188 67.6
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 2.3e-72 276.6 190 68.4
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 3.0e-72 276.2 189 68.8
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 3.0e-72 276.2 189 67.7
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 3.9e-72 275.8 189 68.3
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 5.1e-72 275.4 212 61.8
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.1e-72 275.4 192 65.6
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 5.1e-72 275.4 192 65.6
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 5.1e-72 275.4 194 65.5
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 5.1e-72 275.4 212 61.8
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 6.7e-72 275.0 213 62.0
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 6.7e-72 275.0 193 67.4
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 6.7e-72 275.0 194 66.0
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 6.7e-72 275.0 199 63.8
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 6.7e-72 275.0 192 67.2
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 6.7e-72 275.0 190 68.4
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 6.7e-72 275.0 193 67.9
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 8.7e-72 274.6 218 63.3
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 8.7e-72 274.6 188 68.1
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.1e-71 274.2 223 60.1
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 1.1e-71 274.2 194 66.0
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 1.1e-71 274.2 194 66.0
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 1.1e-71 274.2 198 63.6
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 1.1e-71 274.2 212 62.7
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 1.5e-71 273.9 194 66.0
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 1.5e-71 273.9 194 66.0
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 1.5e-71 273.9 192 65.1
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.5e-71 273.9 222 62.2
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.9e-71 273.5 224 60.3
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 2.5e-71 273.1 189 67.2
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 3.3e-71 272.7 194 66.0
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 3.3e-71 272.7 192 65.6
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 5.7e-71 271.9 223 59.2
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 7.4e-71 271.6 189 67.2
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 9.7e-71 271.2 206 62.1
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 1.3e-70 270.8 192 67.2
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 1.6e-70 270.4 221 59.3
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-70 270.0 219 58.9
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 3.7e-70 269.2 188 67.0
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 3.7e-70 269.2 197 64.5
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 3.7e-70 269.2 197 64.5
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 4.8e-70 268.9 190 65.8
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 6.3e-70 268.5 198 63.6
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 6.3e-70 268.5 191 66.0
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 1.1e-69 267.7 194 65.5
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.4e-69 267.3 196 66.3
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.4e-69 266.5 206 61.7
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.1e-69 266.2 206 61.2
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 1.5e-68 263.8 193 63.7
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.9e-66 256.9 200 63.5
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 3.2e-66 256.1 194 62.4
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 3.2e-66 256.1 194 65.5
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.2e-65 254.2 222 57.2
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 1.2e-65 254.2 223 56.5
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 2.7e-65 253.1 207 60.4
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 3.6e-65 252.7 194 60.8
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 2.0e-63 246.9 195 60.5
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 3.1e-61 239.6 214 56.5
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 1.2e-60 237.7 223 54.7
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 1.0e-59 234.6 189 62.4
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 1.1e-58 231.1 142 74.6
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 1.6e-57 227.3 193 58.0
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 3.0e-56 223.0 177 59.9
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 1.5e-52 210.7 183 53.6
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.3e-43 181.0 252 41.7
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 1.9e-42 177.2 122 66.4
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.4e-40 171.0 142 56.3
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 1.8e-40 170.6 142 57.0
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 1.7e-38 164.1 146 56.2
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 3.1e-37 159.8 100 71.0
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 9.1e-37 158.3 209 45.0
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 5.2e-24 115.9 82 65.9
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 2.0e-23 114.0 85 64.7
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 2.4e-21 107.1 66 74.2
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 9.2e-21 105.1 66 71.2
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 9.2e-21 105.1 80 62.5
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 1.6e-20 104.4 107 48.6
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 1.9e-10 70.9 189 27.5
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.9e-10 70.9 189 27.5
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 2.5e-10 70.5 189 27.0
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 2.5e-10 70.5 189 27.0
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 2.1e-09 67.4 189 28.0
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 3.6e-09 66.6 198 26.8
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 4.7e-09 66.2 189 27.5
AT5G15390 Arabidopsis thaliana HOM05D006539 ORTHO05D008694 8.0e-09 65.5 189 27.5
Carub.0006s1356 Capsella rubella HOM05D006539 ORTHO05D008694 1.8e-08 64.3 189 27.0
Gohir.D11G075300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 1.8e-08 64.3 189 27.5
Gorai.007G080900 Gossypium raimondii HOM05D006539 ORTHO05D008694 1.8e-08 64.3 189 27.5
AL6G26250 Arabidopsis lyrata HOM05D006539 ORTHO05D008694 2.3e-08 63.9 189 27.0
CARHR197920 Cardamine hirsuta HOM05D006539 ORTHO05D008694 2.3e-08 63.9 189 27.5
Gohir.A11G071300 Gossypium hirsutum HOM05D006539 ORTHO05D008694 2.3e-08 63.9 170 27.6
Thecc.04G090200 Theobroma cacao HOM05D006539 ORTHO05D008694 5.2e-08 62.8 169 27.8
Duzib264G0172 Durio zibethinus HOM05D006539 ORTHO05D008694 2.0e-07 60.8 170 26.5
Aa31LG11G14170 Aethionema arabicum HOM05D006539 ORTHO05D008694 3.4e-07 60.1 189 26.5
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 4.4e-07 59.7 155 25.2
VMungo1383G3577 Vigna mungo HOM05D006539 ORTHO05D008694 4.4e-07 59.7 155 27.1
ClCG10G015450 Citrullus lanatus HOM05D003516 ORTHO05D004068 5.8e-07 59.3 155 27.7
CsaV3_3G041040 Cucumis sativus L. HOM05D006539 ORTHO05D008694 5.8e-07 59.3 155 27.7
HanXRQChr09g0264131 Helianthus annuus HOM05D006539 ORTHO05D008694 7.5e-07 58.9 157 26.1
Sc11g0004810 Simmondsia chinensis HOM05D006539 ORTHO05D008694 7.5e-07 58.9 154 27.3
Lju41A8T108 Lonicera japonica HOM05D006539 ORTHO05D008694 9.8e-07 58.5 155 28.4
Phvul.008G040300 Phaseolus vulgaris HOM05D006539 ORTHO05D008694 9.8e-07 58.5 155 27.1
arahy.Tifrunner.gnm1.ann1.YFBV2Q Arachis hypogaea HOM05D006539 ORTHO05D008694 1.3e-06 58.2 190 26.8
Glyma.08G241400 Glycine max HOM05D006539 ORTHO05D008694 1.3e-06 58.2 155 27.1
THA.LOC104822345 Tarenaya hassleriana HOM05D006539 ORTHO05D008694 1.3e-06 58.2 157 27.4
QL02p039353 Quercus lobata HOM05D006539 ORTHO05D008694 2.2e-06 57.4 152 26.3
QL02p039600 Quercus lobata HOM05D006539 ORTHO05D008694 2.2e-06 57.4 152 26.3
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 2.9e-06 57.0 170 25.3
Prupe.3G259900 Prunus persica HOM05D006539 ORTHO05D008694 3.7e-06 56.6 157 26.8
Sabra04G0067100 Salix brachista HOM05D006539 ORTHO05D008694 3.7e-06 56.6 189 24.3
Sed0012723 Sechium edule HOM05D003516 ORTHO05D004068 3.7e-06 56.6 189 25.9
Atru.chr8.368 Acer truncatum HOM05D006539 ORTHO05D008694 4.9e-06 56.2 190 26.8
CiPaw.03G091900 Carya illinoinensis HOM05D006539 ORTHO05D008694 4.9e-06 56.2 154 26.0
CDE06G2615 Ceratophyllum demersum HOM05D006539 ORTHO05D008694 4.9e-06 56.2 155 25.2
TAR371G0397 Trochodendron aralioides HOM05D006539 ORTHO05D008694 4.9e-06 56.2 159 25.2
TAR371G0750 Trochodendron aralioides HOM05D006539 ORTHO05D008694 4.9e-06 56.2 159 25.2
Cc07_g03820 Coffea canephora HOM05D006539 ORTHO05D008694 6.4e-06 55.8 190 26.3
FAN14G0848 Fragaria x ananassa HOM05D006539 ORTHO05D008694 6.4e-06 55.8 161 24.8
Lsat_1_v5_gn_4_170180 Lactuca sativa HOM05D006539 ORTHO05D008694 6.4e-06 55.8 155 24.5
PGR004G2004 Punica granatum HOM05D006539 ORTHO05D008694 6.4e-06 55.8 189 25.9


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