Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 5.7e-167 590.9 306 100.0
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 1.4e-32 144.4 250 39.6
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 7.0e-32 142.1 241 39.8
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 7.0e-32 142.1 241 40.2
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 9.1e-32 141.7 241 40.2
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 9.1e-32 141.7 250 40.0
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 1.6e-31 141.0 241 40.7
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.6e-31 140.2 241 39.0
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 5.9e-31 139.0 239 38.5
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 5.9e-31 139.0 217 41.0
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 7.7e-31 138.7 238 38.7
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.3e-30 137.9 257 38.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.7e-30 137.5 246 35.8
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.7e-30 137.5 246 35.8
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.2e-30 137.1 237 37.1
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.2e-30 137.1 239 38.5
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 3.8e-30 136.3 260 36.5
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 5.0e-30 136.0 241 38.6
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 6.5e-30 135.6 241 37.3
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 6.5e-30 135.6 224 38.4
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.5e-30 135.6 246 35.8
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 8.5e-30 135.2 251 37.5
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.5e-30 135.2 250 36.8
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 8.5e-30 135.2 237 38.4
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.2e-29 133.3 250 36.0
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 9.4e-29 131.7 242 37.6
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-28 131.3 246 36.2
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.6e-28 131.0 241 36.5
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.6e-28 131.0 246 34.6
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 1.6e-28 131.0 248 37.1
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.1e-28 130.6 250 33.6
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.1e-28 130.6 237 37.6
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 2.7e-28 130.2 246 36.6
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 4.7e-28 129.4 257 37.0
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 8.0e-28 128.6 246 35.8
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.0e-27 128.3 246 35.8
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.8e-27 127.5 241 37.8
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.8e-27 127.5 241 36.5
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 2.3e-27 127.1 217 36.4
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 4.0e-27 126.3 250 36.0
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 5.2e-27 125.9 249 35.7
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 6.8e-27 125.6 229 35.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-26 124.8 246 34.6
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.2e-26 124.8 241 37.8
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.2e-26 124.8 241 36.5
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.5e-26 124.4 256 38.3
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.5e-26 124.4 255 35.3
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 2.0e-26 124.0 241 34.9
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 4.4e-26 122.9 241 37.3
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.4e-26 122.9 223 38.1
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 5.7e-26 122.5 249 35.3
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 7.5e-26 122.1 238 35.3
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 7.5e-26 122.1 238 35.7
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.3e-25 121.3 229 35.8
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.7e-25 119.8 231 37.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 3.7e-25 119.8 238 35.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 6.3e-25 119.0 241 35.7
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.4e-24 117.9 261 33.7
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 1.8e-24 117.5 249 32.1
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 4.1e-24 116.3 241 34.9
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 9.1e-24 115.2 239 33.5
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 4.5e-23 112.8 246 32.1
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.9e-23 112.5 225 36.9
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 5.9e-23 112.5 226 35.0
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 7.7e-23 112.1 246 30.9
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.0e-22 111.7 200 35.5
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 2.9e-22 110.2 247 33.6
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 8.5e-22 108.6 242 32.2
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 1.1e-21 108.2 219 33.8
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 1.9e-21 107.5 242 32.2
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.2e-20 104.8 217 33.2
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.7e-20 103.6 224 31.2
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-19 101.3 233 32.6
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 1.4e-19 101.3 221 33.0
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.8e-19 100.9 246 28.5
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.3e-19 100.5 248 29.4
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 1.2e-18 98.2 218 32.6
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 4.4e-18 96.3 219 29.7
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.5e-18 95.5 246 29.7
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 7.0e-16 89.0 69 56.5
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.3e-14 84.7 191 32.5
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 8.6e-14 82.0 217 31.3
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 2.5e-13 80.5 108 47.2
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.2e-12 78.2 114 41.2
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.1e-12 77.4 79 51.9
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 2.8e-12 77.0 241 27.0
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 6.1e-12 75.9 235 27.2
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-11 74.3 216 30.6
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.4e-10 70.1 78 48.7
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 9.8e-10 68.6 98 41.8
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.3e-09 68.2 177 31.1
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.7e-09 67.8 69 53.6
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 8.3e-09 65.5 70 50.0
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-08 65.1 105 40.0
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 3.2e-08 63.5 51 58.8
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.2e-08 63.5 41 63.4
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 5.4e-08 62.8 44 59.1
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.0e-07 60.8 60 53.3
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 3.9e-06 56.6 36 63.9


User provided reference genes

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