Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Mapoly0001s0010 Marchantia polymorpha HOM05D006050 ORTHO05D007457 0.0e+00 1136.7 577 100.0
AagrBONN_evm.TU.Sc2ySwM_228.2617 Anthoceros agrestis HOM05D006050 ORTHO05D007457 1.2e-120 438.0 358 63.4
SMO239G0146 Selaginella moellendorffii HOM05D006050 ORTHO05D007457 8.0e-114 415.2 323 65.9
TAR627G0203 Trochodendron aralioides HOM05D006050 ORTHO05D007457 3.0e-108 396.7 363 56.7
PSO017G0250 Papaver somniferum HOM05D006050 ORTHO05D007457 3.3e-107 393.3 357 57.7
PGR083G2192 Punica granatum HOM05D006050 ORTHO05D007457 4.3e-107 392.9 383 53.8
PSO170G3783 Papaver somniferum HOM05D006050 ORTHO05D007457 1.2e-106 391.3 357 57.1
Aqoxy4G00089 Aquilegia oxysepala HOM05D006050 ORTHO05D007457 6.2e-106 389.0 355 56.9
Dinv30732 Davidia involucrata HOM05D006050 ORTHO05D007457 6.2e-106 389.0 383 52.7
MD10G1263200 Malus domestica HOM05D006050 ORTHO05D007457 6.2e-106 389.0 382 55.0
MD05G1284800 Malus domestica HOM05D006050 ORTHO05D007457 3.1e-105 386.7 383 54.6
Thecc.06G151800 Theobroma cacao HOM05D006050 ORTHO05D007457 1.3e-103 381.3 346 57.8
ClCG03G007090 Citrullus lanatus HOM05D006050 ORTHO05D007457 2.2e-103 380.6 365 55.6
Gorai.009G155500 Gossypium raimondii HOM05D006050 ORTHO05D007457 8.3e-103 378.6 352 56.8
QL05p058532 Quercus lobata HOM05D006050 ORTHO05D007457 8.3e-103 378.6 356 55.6
Rhsim13G0194500 Rhododendron simsii HOM05D006050 ORTHO05D007457 1.1e-102 378.3 444 48.2
GSVIVG01021436001 Vitis vinifera HOM05D006050 ORTHO05D007457 1.4e-102 377.9 342 58.2
RcHm_v2.0_Chr5g0013951 Rosa chinensis HOM05D006050 ORTHO05D007457 1.9e-102 377.5 367 54.2
FvH4_3g05720 Fragaria vesca HOM05D006050 ORTHO05D007457 2.4e-102 377.1 363 54.5
CsaV3_1G032660 Cucumis sativus L. HOM05D006050 ORTHO05D007457 5.4e-102 375.9 383 52.5
Gohir.A05G149000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 9.2e-102 375.2 352 56.5
Gohir.D05G151500 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.7e-101 373.6 352 56.2
Actinidia19520 Actinidia chinensis HOM05D006050 ORTHO05D007457 4.6e-101 372.9 339 55.5
HPP92_021321 Vanilla planifolia HOM05D006050 ORTHO05D007457 7.8e-101 372.1 360 53.6
Manes.17G069500 Manihot esculenta HOM05D006050 ORTHO05D007457 1.7e-100 370.9 355 54.4
Sed0022060 Sechium edule HOM05D006050 ORTHO05D007457 1.7e-100 370.9 363 54.3
Lj2C306G12 Lonicera japonica HOM05D006050 ORTHO05D007457 3.9e-100 369.8 370 54.1
Nn3g20737 Nelumbo nucifera HOM05D006050 ORTHO05D007457 3.9e-100 369.8 405 51.1
Peaxi162Scf00170g00718 Petunia axillaris HOM05D006050 ORTHO05D007457 8.6e-100 368.6 326 57.4
FAN21G0460 Fragaria x ananassa HOM05D006050 ORTHO05D007457 3.3e-99 366.7 321 58.3
Hma1.2p1_0286F.1_g114100 Hydrangea macrophylla HOM05D006050 ORTHO05D007457 5.6e-99 365.9 328 57.0
FAN25G0090 Fragaria x ananassa HOM05D006050 ORTHO05D007457 7.3e-99 365.5 321 57.9
vmacro04186 Vaccinium macrocarpon HOM05D006050 ORTHO05D007457 7.3e-99 365.5 363 51.8
TWI73G0574 Tripterygium wilfordii HOM05D006050 ORTHO05D007457 9.5e-99 365.2 355 54.9
CBR_g3965 Chara braunii HOM05D006050 ORTHO05D007457 6.2e-98 362.5 359 53.5
Atru.chr10.1253 Acer truncatum HOM05D006050 ORTHO05D007457 8.1e-98 362.1 363 52.6
AL7G36120 Arabidopsis lyrata HOM05D006050 ORTHO05D007457 5.2e-97 359.4 346 53.8
Sp7g15790 Schrenkiella parvula HOM05D006050 ORTHO05D007457 5.2e-97 359.4 346 54.3
Solyc02g070560.3 Solanum lycopersicum HOM05D006050 ORTHO05D007457 6.8e-97 359.0 326 56.4
AT4G18270 Arabidopsis thaliana HOM05D006050 ORTHO05D007457 8.9e-97 358.6 346 52.9
Potri.011G080600 Populus trichocarpa HOM05D006050 ORTHO05D007457 8.9e-97 358.6 409 49.9
Migut.M00918 Erythranthe guttata HOM05D006050 ORTHO05D007457 5.8e-96 355.9 354 52.5
CAN.G650.1 Capsicum annuum HOM05D006050 ORTHO05D007457 2.9e-95 353.6 326 55.8
CiPaw.09G124900 Carya illinoinensis HOM05D006050 ORTHO05D007457 4.9e-95 352.8 340 55.6
Thhalv10025036m.g Eutrema salsugineum HOM05D006050 ORTHO05D007457 2.4e-94 350.5 355 52.1
Nitab4.5_0002275g0100 Nicotiana tabacum HOM05D006050 ORTHO05D007457 4.2e-94 349.7 452 46.5
Eucgr.D00300 Eucalyptus grandis HOM05D006050 ORTHO05D007457 1.2e-93 348.2 328 54.9
Nitab4.5_0009607g0030 Nicotiana tabacum HOM05D006050 ORTHO05D007457 1.6e-93 347.8 422 47.4
Gorai.011G043000 Gossypium raimondii HOM05D006050 ORTHO05D007457 1.7e-92 344.4 327 54.7
Haze_05583 Corylus avellana HOM05D006050 ORTHO05D007457 2.3e-92 344.0 355 53.8
A03p51180 Brassica napus HOM05D006050 ORTHO05D007457 3.3e-91 340.1 346 51.4
BolC7t45462H Brassica oleracea HOM05D006050 ORTHO05D007457 3.3e-91 340.1 346 51.7
BraA03t14200Z Brassica rapa HOM05D006050 ORTHO05D007457 3.3e-91 340.1 346 51.4
C07p49580 Brassica napus HOM05D006050 ORTHO05D007457 7.3e-91 339.0 346 51.4
Cc09_g09460 Coffea canephora HOM05D006050 ORTHO05D007457 1.2e-90 338.2 328 53.7
Oeu052380.1 Olea europaea HOM05D006050 ORTHO05D007457 2.1e-90 337.4 395 47.8
Sabra11G0069700 Salix brachista HOM05D006050 ORTHO05D007457 2.1e-90 337.4 346 52.6
THA.LOC104812850 Tarenaya hassleriana HOM05D006050 ORTHO05D007457 4.7e-90 336.3 365 49.3
Lj6g0009694 Lotus japonicus HOM05D006050 ORTHO05D007457 3.4e-88 330.1 359 47.4
HanXRQChr02g0047351 Helianthus annuus HOM05D006050 ORTHO05D007457 4.4e-88 329.7 346 52.3
Ca_00551_v3 Cicer arietinum L. HOM05D006050 ORTHO05D007457 2.2e-87 327.4 359 47.9
Glyma.15G094900 Glycine max HOM05D006050 ORTHO05D007457 4.9e-87 326.2 365 47.4
Aa31LG6G960 Aethionema arabicum HOM05D006050 ORTHO05D007457 6.4e-87 325.9 343 51.0
Cpa.g.sc166.17 Carica papaya HOM05D006050 ORTHO05D007457 6.4e-87 325.9 309 55.7
Psat1g190800 Pisum sativum HOM05D006050 ORTHO05D007457 1.1e-86 325.1 359 47.1
Sc05g0006350 Simmondsia chinensis HOM05D006050 ORTHO05D007457 1.4e-86 324.7 349 48.7
Phvul.006G163900 Phaseolus vulgaris HOM05D006050 ORTHO05D007457 1.9e-86 324.3 364 48.1
VMungo0540G2452 Vigna mungo HOM05D006050 ORTHO05D007457 1.6e-85 321.2 364 47.0
MELO3C002716.2 Cucumis melo HOM05D006050 ORTHO05D007457 2.7e-85 320.5 325 53.2
Medtr2g019630 Medicago truncatula HOM05D006050 ORTHO05D007457 1.0e-84 318.5 346 48.3
Sabra11G0067500 Salix brachista HOM05D006050 ORTHO05D007457 2.3e-84 317.4 376 48.4
ATR0044G011 Amborella trichopoda HOM05D006050 ORTHO05D007457 5.1e-84 316.2 297 57.2
ECA248G2274 Erigeron canadensis HOM05D006050 ORTHO05D007457 1.1e-83 315.1 325 52.0
TPR.G28613 Trifolium pratense HOM05D006050 ORTHO05D007457 9.6e-83 312.0 360 46.9
DCAR_003921 Daucus carota HOM05D006050 ORTHO05D007457 3.6e-82 310.1 308 53.2
arahy.Tifrunner.gnm1.ann1.49YCVY Arachis hypogaea HOM05D006050 ORTHO05D007457 2.4e-81 307.4 358 45.8
arahy.Tifrunner.gnm1.ann1.9VA34X Arachis hypogaea HOM05D006050 ORTHO05D007457 2.4e-81 307.4 358 45.8
EL10Ac8g19724 Beta vulgaris HOM05D006050 ORTHO05D007457 3.4e-80 303.5 352 46.3
Duzib192G0778 Durio zibethinus HOM05D006050 ORTHO05D007457 5.8e-80 302.8 328 51.2
Duzib235G1544 Durio zibethinus HOM05D006050 ORTHO05D007457 4.9e-79 299.7 258 58.9
Ah.09g232650 Amaranthus hybridus HOM05D006050 ORTHO05D007457 1.2e-77 295.0 327 47.1
SalBow8G2368 Salvia bowleyana HOM05D006050 ORTHO05D007457 2.3e-76 290.8 344 45.9
Lsat_1_v5_gn_1_97741 Lactuca sativa HOM05D006050 ORTHO05D007457 1.3e-74 285.0 410 44.1
Mapoly0042s0029 Marchantia polymorpha HOM05D006050 ORTHO05D007457 5.8e-72 276.2 164 87.8
Ciclev10017950m.g Citrus clementina HOM05D006050 ORTHO05D007457 4.9e-71 273.1 331 45.9
HPP92_008747 Vanilla planifolia HOM05D006050 ORTHO05D007457 1.1e-67 261.9 405 40.2
FvH4_3g05710 Fragaria vesca HOM05D006050 ORTHO05D007457 5.6e-67 259.6 323 45.2
MBI10_g02216_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 3.4e-64 250.4 210 60.5
SGA_v2.0_scaffold1G00164 Striga asiatica HOM05D006050 ORTHO05D007457 3.4e-64 250.4 354 40.4
AUR62027517 Chenopodium quinoa HOM05D006050 ORTHO05D007457 5.8e-64 249.6 453 36.4
Carub.0007s2301 Capsella rubella HOM05D006050 ORTHO05D007457 6.9e-57 226.1 189 61.4
PRCOL_00000982 Prasinoderma coloniale HOM05D006050 ORTHO05D007457 8.8e-52 209.1 326 41.7
Lalb_Chr18g0055531 Lupinus albus HOM05D006050 ORTHO05D007457 9.7e-51 205.7 187 54.0
SEGI_21633 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 8.2e-50 202.6 154 60.4
PGSC0003DMG401021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 6.9e-49 199.5 162 63.0
MCO07G478 Micromonas commoda HOM05D006050 ORTHO05D007457 5.9e-48 196.4 303 41.6
BcaNung05669 Brassica carinata HOM05D006050 ORTHO05D007457 4.2e-46 190.3 163 60.1
SGA_v2.0_scaffold333G48995 Striga asiatica HOM05D001706 ORTHO05D007457 4.4e-43 180.3 320 37.5
SEGI_20862 Sequoiadendron giganteum HOM05D006050 ORTHO05D007457 2.1e-37 161.4 120 66.7
MBI10_g02215_MAGBIO Magnolia biondii HOM05D006050 ORTHO05D007457 1.4e-36 158.7 163 50.3
DCAR_029765 Daucus carota HOM05D006050 ORTHO05D007457 2.0e-35 154.8 176 48.9
Pp3c6_19460 Physcomitrium patens HOM05D006050 ORTHO05D007457 2.0e-35 154.8 160 48.1
Cpa.g.sc166.18 Carica papaya HOM05D006050 ORTHO05D007457 2.2e-34 151.4 106 72.6
AUR62030211 Chenopodium quinoa HOM05D006050 ORTHO05D007457 8.2e-34 149.4 214 42.1
Prupe.4G079600 Prunus persica HOM05D006050 ORTHO05D007457 1.2e-32 145.6 189 42.9
Carub.0007s2300 Capsella rubella HOM05D006050 ORTHO05D007457 7.2e-30 136.3 158 43.7
COL.COLO4_31087 Corchorus olitorius HOM05D006050 ORTHO05D007457 7.2e-30 136.3 161 43.5
Glyma.13G217500 Glycine max HOM05D006050 ORTHO05D007457 1.2e-29 135.6 170 41.8
PGSC0003DMG402021159 Solanum tuberosum HOM05D006050 ORTHO05D007457 5.2e-28 130.2 135 48.1
AUR62030212 Chenopodium quinoa HOM05D006050 ORTHO05D007457 9.7e-27 125.9 141 48.2
Gohir.D10G040800 Gossypium hirsutum HOM05D006050 ORTHO05D007457 1.8e-25 121.7 169 40.8
Gohir.A10G040000 Gossypium hirsutum HOM05D006050 ORTHO05D007457 2.4e-25 121.3 169 40.8
Lalb_Chr18g0055521 Lupinus albus HOM05D006050 ORTHO05D007457 4.1e-25 120.6 169 37.3
PSO063G2775 Papaver somniferum HOM05D006050 ORTHO05D007457 3.5e-24 117.5 110 58.2
FAN11G0378 Fragaria x ananassa HOM05D006050 ORTHO05D007457 1.0e-23 115.9 175 39.4
CARHR225070 Cardamine hirsuta HOM05D006050 ORTHO05D007457 5.0e-23 113.6 133 45.1
Zm00001eb120180 Zea mays HOM05D006050 ORTHO05D007457 5.0e-23 113.6 198 34.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.1e-21 108.2 155 37.4
CSS0017405 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 4.7e-21 107.1 69 75.4
Sopen02g019650 Solanum pennellii HOM05D006050 ORTHO05D007457 8.0e-21 106.3 102 52.0
DCAR_011844 Daucus carota HOM05D006050 ORTHO05D007457 5.9e-16 90.1 87 51.7
CSS0043541 Camellia sinensis var. sinensis HOM05D006050 ORTHO05D007457 1.5e-14 85.5 57 66.7
unitig_32.g11518 Utricularia gibba HOM05D006050 ORTHO05D007457 2.8e-10 71.2 129 32.6
COL.COLO4_31088 Corchorus olitorius HOM05D006050 ORTHO05D007457 1.2e-08 65.9 58 56.9


User provided reference genes

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