Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S095224 Manihot esculenta HOM05D001177 ORTHO05D007091 4.5e-74 281.2 143 100.0
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 2.2e-65 252.3 138 93.5
Manes.01G049405 Manihot esculenta HOM05D001177 ORTHO05D007091 3.8e-65 251.5 139 93.5
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 2.7e-47 192.2 138 68.8
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 1.0e-46 190.3 139 70.5
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 1.2e-45 186.8 139 67.6
Dinv33388 Davidia involucrata HOM05D001177 ORTHO05D007091 1.2e-42 176.8 141 63.8
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 3.5e-42 175.3 140 63.6
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 4.5e-42 174.9 140 63.6
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 2.3e-41 172.6 145 62.8
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 1.9e-40 169.5 138 62.3
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 1.6e-39 166.4 138 62.3
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 2.8e-39 165.6 140 62.9
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 2.8e-39 165.6 140 62.9
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 1.8e-38 162.9 138 59.4
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 3.0e-38 162.2 140 61.4
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 3.0e-38 162.2 138 61.6
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 6.8e-38 161.0 140 60.0
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 2.6e-37 159.1 139 60.4
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 2.6e-37 159.1 138 64.5
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 1.7e-36 156.4 140 57.9
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 2.8e-36 155.6 140 58.6
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 4.9e-36 154.8 141 61.7
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 1.4e-35 153.3 142 56.3
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 2.4e-35 152.5 139 58.3
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 9.2e-35 150.6 140 58.6
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 3.5e-34 148.7 138 58.7
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 4.5e-34 148.3 140 59.3
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 1.0e-33 147.1 143 58.0
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 1.3e-33 146.7 139 57.6
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.3e-33 146.7 138 58.0
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 3.8e-33 145.2 140 57.9
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 5.0e-33 144.8 140 57.1
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 6.6e-33 144.4 140 57.1
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 1.1e-32 143.7 141 56.0
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.1e-32 143.7 140 55.0
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 1.9e-32 142.9 138 55.8
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 2.5e-32 142.5 140 52.9
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 3.3e-32 142.1 138 58.0
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 3.3e-32 142.1 138 56.5
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 4.3e-32 141.7 142 56.3
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 7.3e-32 141.0 141 57.4
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 4.7e-31 138.3 140 55.7
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 3.0e-30 135.6 141 55.3
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 3.0e-30 135.6 141 55.3
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 4.0e-30 135.2 138 56.5
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 5.2e-30 134.8 170 48.8
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 5.2e-30 134.8 138 55.1
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.0e-29 132.9 170 48.2
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 5.8e-29 131.3 150 51.3
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 7.5e-29 131.0 146 52.7
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 1.3e-28 130.2 171 47.4
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 2.2e-28 129.4 140 52.9
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 2.2e-28 129.4 142 50.7
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 2.9e-28 129.0 138 53.6
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 3.7e-28 128.6 140 57.9
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 4.9e-28 128.3 140 52.9
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 8.3e-28 127.5 138 52.9
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 1.8e-27 126.3 150 48.7
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 1.8e-27 126.3 149 55.0
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 3.2e-27 125.6 140 52.9
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 3.2e-27 125.6 173 45.7
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 4.1e-27 125.2 138 52.9
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 5.4e-27 124.8 139 53.2
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 7.0e-27 124.4 139 52.5
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 7.0e-27 124.4 138 54.3
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 9.2e-27 124.0 139 53.2
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.2e-26 123.6 166 46.4
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 1.0e-25 120.6 138 53.6
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.7e-25 119.8 140 50.7
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.7e-25 119.8 140 50.7
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 3.0e-25 119.0 138 48.6
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 3.9e-25 118.6 143 49.7
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 1.9e-24 116.3 145 46.2
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 4.3e-24 115.2 146 47.3
AUR62005578 Chenopodium quinoa HOM05D001177 ORTHO05D007091 2.1e-23 112.8 138 47.8
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 4.7e-23 111.7 171 44.4
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 8.9e-22 107.5 188 37.2
Nitab4.5_0000040g0530 Nicotiana tabacum HOM05D001177 ORTHO05D007091 8.9e-22 107.5 144 48.6
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 8.9e-22 107.5 138 47.8
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 3.7e-20 102.1 145 43.4
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 3.2e-19 99.0 141 44.7
AUR62024152 Chenopodium quinoa HOM05D001177 ORTHO05D007091 4.1e-19 98.6 142 44.4
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 5.4e-19 98.2 139 43.9
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 9.2e-19 97.4 138 43.5
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 2.1e-18 96.3 139 43.9
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 3.5e-18 95.5 141 41.8
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 4.6e-18 95.1 144 43.8
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 7.8e-18 94.4 139 41.7
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.3e-17 93.6 146 41.8
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 1.9e-16 89.7 138 38.4
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 3.3e-16 89.0 107 47.7
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 1.6e-15 86.7 141 40.4
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 1.6e-15 86.7 142 39.4
Cfa007285 Carpinus fangiana HOM05D001177 ORTHO05D007091 1.6e-15 86.7 102 47.1
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 8.1e-15 84.3 140 40.7
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 3.1e-14 82.4 141 37.6
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 4.0e-14 82.0 140 39.3
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 5.2e-14 81.6 140 38.6
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 5.2e-14 81.6 141 39.0
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 8.9e-14 80.9 138 36.2
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 8.9e-14 80.9 143 39.2
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 7.5e-13 77.8 143 37.8
Aa31LG2G5370 Aethionema arabicum HOM05D001177 ORTHO05D001507 9.9e-13 77.4 144 36.1
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 1.7e-12 76.6 144 40.3
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 4.9e-12 75.1 145 38.6
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 2.1e-10 69.7 66 50.0
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 2.1e-10 69.7 130 36.9
C02p54100 Brassica napus HOM05D001177 ORTHO05D001507 7.8e-10 67.8 143 35.7
BolC2t11472H Brassica oleracea HOM05D001177 ORTHO05D001507 7.8e-10 67.8 143 35.7
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.0e-09 67.4 75 54.7
Zm00001eb111820 Zea mays HOM05D001177 ORTHO05D007091 1.7e-09 66.6 29 93.1
Thecc.04G025000 Theobroma cacao HOM05D001177 ORTHO05D007091 2.3e-09 66.2 73 52.1
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 2.3e-09 66.2 141 34.0
BcaC03g14536 Brassica carinata HOM05D001177 ORTHO05D007091 3.0e-09 65.9 30 86.7
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 3.0e-09 65.9 30 86.7
C08p08490 Brassica napus HOM05D000546 ORTHO05D000398 3.0e-09 65.9 30 86.7
Peaxi162Scf00080g01722 Petunia axillaris HOM05D001177 ORTHO05D007091 3.0e-09 65.9 72 50.0
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 6.6e-09 64.7 222 28.8
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 6.6e-09 64.7 34 79.4
A02p35380 Brassica napus HOM05D001177 ORTHO05D007091 3.3e-08 62.4 143 30.8
C08p35970 Brassica napus HOM05D001177 ORTHO05D007091 7.3e-08 61.2 85 40.0
C09p60530 Brassica napus HOM05D001177 ORTHO05D007091 7.3e-08 61.2 85 40.0
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 1.6e-07 60.1 211 28.4
MD05G1086500 Malus domestica HOM05D001177 ORTHO05D007091 2.8e-07 59.3 44 61.4
Mapoly0006s0009 Marchantia polymorpha HOM05D001177 ORTHO05D007091 2.8e-07 59.3 175 31.4
Medtr7g035455 Medicago truncatula HOM05D001177 ORTHO05D007091 3.6e-07 58.9 62 51.6
CBR_g51805 Chara braunii HOM05D001177 ORTHO05D007091 6.2e-07 58.2 57 50.9
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 1.1e-06 57.4 138 32.6
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 1.8e-06 56.6 139 34.5
Ca_11723_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 5.2e-06 55.1 43 60.5


User provided reference genes

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