Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 8.8e-179 630.2 319 100.0
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 6.4e-121 438.0 306 75.2
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 2.7e-119 432.6 306 73.2
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 6.0e-119 431.4 312 72.8
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 1.0e-118 430.6 308 73.1
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.8e-115 419.9 306 71.6
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 5.3e-115 418.3 314 70.7
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 1.5e-114 416.8 299 71.9
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 1.3e-113 413.7 306 69.9
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.7e-113 413.3 307 69.7
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.9e-113 412.5 314 70.4
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 8.4e-113 411.0 315 69.8
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 1.1e-112 410.6 323 68.7
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.4e-112 410.2 306 68.3
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.4e-112 410.2 275 74.2
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 1.6e-111 406.8 306 68.0
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.6e-111 406.8 281 73.0
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 2.1e-111 406.4 307 68.1
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 2.1e-111 406.4 301 68.8
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 2.7e-111 406.0 301 68.1
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 6.0e-111 404.8 307 69.1
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 6.0e-111 404.8 301 68.1
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 7.9e-111 404.4 307 69.7
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 1.7e-110 403.3 265 73.6
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.7e-110 403.3 300 69.0
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 3.0e-110 402.5 258 77.1
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 6.6e-110 401.4 307 68.1
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 1.1e-109 400.6 265 73.6
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 3.3e-109 399.1 279 68.5
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 1.6e-108 396.7 306 69.0
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-108 396.7 307 67.8
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 2.8e-108 396.0 315 65.7
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 8.1e-108 394.4 306 69.3
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.1e-107 394.0 339 61.9
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 6.9e-107 391.3 298 67.8
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.5e-106 390.2 283 69.6
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.3e-105 387.1 307 65.5
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 1.7e-105 386.7 278 69.1
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 2.2e-105 386.3 283 67.1
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 2.2e-105 386.3 286 68.2
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 2.9e-105 386.0 277 67.9
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 4.9e-105 385.2 270 70.4
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 6.4e-105 384.8 265 72.1
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 3.2e-104 382.5 270 68.9
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 4.2e-104 382.1 306 65.0
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 5.4e-104 381.7 333 61.9
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 2.1e-103 379.8 271 69.0
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 3.5e-103 379.0 271 69.0
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.5e-103 379.0 256 73.4
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 3.9e-102 375.6 247 74.9
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 5.1e-102 375.2 284 67.3
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 1.1e-101 374.0 246 76.4
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 7.4e-101 371.3 247 74.5
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 9.6e-101 370.9 246 72.4
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 9.0e-99 364.4 299 64.5
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 3.4e-98 362.5 268 68.3
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 4.5e-98 362.1 310 63.9
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 5.8e-98 361.7 285 67.4
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.3e-97 360.5 307 63.5
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 1.7e-97 360.1 262 69.1
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.9e-97 359.4 307 63.2
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 1.9e-96 356.7 275 66.9
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.9e-96 356.7 317 61.8
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 2.5e-96 356.3 271 65.7
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 3.2e-96 355.9 282 66.3
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 1.2e-95 354.0 267 70.0
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 2.1e-95 353.2 279 64.5
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 1.0e-94 350.9 275 65.1
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.3e-94 350.5 273 63.7
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 3.0e-94 349.4 309 61.2
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 3.9e-94 349.0 253 67.6
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 8.7e-94 347.8 280 65.0
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.1e-93 347.4 278 64.4
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 1.5e-93 347.1 246 72.4
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 1.3e-92 344.0 397 49.6
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 1.3e-92 344.0 258 69.0
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 2.8e-92 342.8 285 65.3
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.1e-91 340.9 307 60.6
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 1.1e-91 340.9 325 57.8
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 2.4e-91 339.7 246 69.1
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.1e-91 339.3 309 57.9
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 9.0e-91 337.8 246 68.7
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 4.5e-90 335.5 308 60.4
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 5.0e-89 332.0 359 53.5
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 1.9e-88 330.1 270 65.2
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 7.2e-88 328.2 246 66.7
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 2.7e-87 326.2 246 66.3
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.7e-87 326.2 282 61.3
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 7.9e-87 324.7 308 56.5
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 3.0e-86 322.8 301 58.5
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 3.0e-86 322.8 306 58.5
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 1.9e-85 320.1 275 61.1
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 1.9e-80 303.5 269 56.1
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 8.8e-78 294.7 260 58.1
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 4.2e-72 275.8 232 63.4
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 4.4e-69 265.8 256 53.5
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.3e-68 264.2 176 75.0
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 2.8e-68 263.1 176 73.3
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.9e-65 253.1 256 53.9
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 9.4e-64 248.1 306 50.3
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 4.7e-63 245.7 270 48.9
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 4.7e-63 245.7 220 61.4
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 7.5e-61 238.4 169 68.6
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 5.0e-57 225.7 189 61.9
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 7.0e-43 178.7 110 75.5
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 3.6e-39 166.4 160 56.9
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 8.0e-39 165.2 122 63.1
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 1.2e-37 161.4 115 67.0
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 9.8e-37 158.3 244 37.7
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 1.9e-32 144.1 134 56.0
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 9.5e-32 141.7 149 49.0
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.6e-31 139.8 143 51.0
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 1.8e-30 137.5 245 40.0
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 6.8e-30 135.6 87 67.8
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 7.0e-27 125.6 136 47.8
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.3e-22 110.5 223 37.2
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 3.7e-20 103.2 92 64.1
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 2.8e-15 87.0 54 72.2
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 3.0e-09 67.0 293 26.3


User provided reference genes

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