Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g16911 Brassica carinata HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
A06p24390 Brassica napus HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.18G141021 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.18G143501 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S001308 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S003270 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S005559 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S009810 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S011445 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S014715 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S015369 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S017659 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S019948 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S022652 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S022952 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S023252 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S024152 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S024916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S025152 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S025316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S025616 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S026116 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S026152 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S026552 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S026852 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S026916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S027252 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S027816 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S029316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S029452 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S029652 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S029716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S029916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S030316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S030552 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S031416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S032816 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S034716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S035316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S035616 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S035916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S037416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S037716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S038216 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S039016 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S040516 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S041716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S043416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S044016 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S045316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S046516 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S047916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S049416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S050716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S051216 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S051716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S053416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S053916 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S055316 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S055716 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S056416 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Manes.S056816 Manihot esculenta HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Potri.008G224120 Populus trichocarpa HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Potri.008G224147 Populus trichocarpa HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
Potri.008G224174 Populus trichocarpa HOM05D000920 ORTHO05D004854 4.7e-16 86.7 41 100.0
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
Manes.S028416 Manihot esculenta HOM05D000920 ORTHO05D004854 6.1e-16 86.3 40 100.0
Sc14g0004110 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.0e-15 85.5 41 97.6
ScUNg0000740 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.0e-15 85.5 41 97.6
ScUNg0001120 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.0e-15 85.5 41 97.6
ScUNg0001170 Simmondsia chinensis HOM05D000920 ORTHO05D004854 1.0e-15 85.5 41 97.6
A06p25510 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-15 84.7 40 97.5
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 1.8e-15 84.7 39 100.0
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.8e-15 84.7 39 100.0
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.8e-15 84.7 39 100.0
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.8e-15 84.7 39 100.0
A06p24060 Brassica napus HOM05D000920 ORTHO05D004854 3.0e-15 84.0 41 97.6
Thhalv10028144m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 3.0e-15 84.0 40 95.0
PGSC0003DMG400024428 Solanum tuberosum HOM05D000920 ORTHO05D004854 3.0e-15 84.0 41 95.1
BcaNung05884 Brassica carinata HOM05D000920 ORTHO05D004854 3.9e-15 83.6 39 97.4
BNapus_Darmor_BZH_scaffold_107p00560 Brassica napus HOM05D000920 ORTHO05D004854 3.9e-15 83.6 39 97.4
Manes.S026416 Manihot esculenta HOM05D000920 ORTHO05D004854 3.9e-15 83.6 41 97.6
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 3.9e-15 83.6 39 97.4
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 5.1e-15 83.2 40 95.0
unitig_548.g34904 Utricularia gibba HOM05D000920 ORTHO05D004854 8.8e-15 82.4 41 95.1
unitig_550.g34863 Utricularia gibba HOM05D000920 ORTHO05D004854 8.8e-15 82.4 41 95.1
unitig_676.g29553 Utricularia gibba HOM05D000920 ORTHO05D004854 8.8e-15 82.4 41 95.1
unitig_99.g29794 Utricularia gibba HOM05D000920 ORTHO05D004854 8.8e-15 82.4 41 95.1
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 1.1e-14 82.0 38 97.4
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-14 80.9 40 92.5
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 3.3e-14 80.5 39 94.9
unitig_659.g33188 Utricularia gibba HOM05D008864 ORTHO05D004854 3.3e-14 80.5 39 94.9
BNapus_Darmor_BZH_scaffold_107p00280 Brassica napus HOM05D000920 ORTHO05D004854 4.4e-14 80.1 37 100.0
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 4.4e-14 80.1 37 100.0
LjContig00092g0015566 Lotus japonicus HOM05D001828 ORTHO05D001745 4.4e-14 80.1 40 92.5
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 40 90.0
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 38 94.7
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 38 94.7
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 38 94.7
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 38 94.7
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-13 77.8 40 90.0
Mapoly4316s0001 Marchantia polymorpha HOM05D000920 ORTHO05D004854 6.3e-13 76.3 41 87.8
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 6.3e-13 76.3 38 89.5
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 8.2e-13 75.9 38 89.5
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 1.4e-12 75.1 40 87.5
BcaNung06295 Brassica carinata HOM05D000920 ORTHO05D004854 1.8e-12 74.7 37 97.3
Sopen00g002210 Solanum pennellii HOM05D000920 ORTHO05D004854 3.1e-12 73.9 38 86.8
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 3.1e-12 73.9 40 82.5
A05p22590 Brassica napus HOM05D000920 ORTHO05D004854 9.1e-12 72.4 41 82.9
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 9.1e-12 72.4 40 82.5
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 1.2e-11 72.0 34 97.1
A09p31330 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-11 71.2 39 87.2
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 2.6e-11 70.9 32 100.0
HPP92_007078 Vanilla planifolia HOM05D000920 ORTHO05D004854 7.7e-11 69.3 33 93.9
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-10 68.2 33 93.9
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 2.2e-10 67.8 35 91.4
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-10 67.4 56 64.3
unitig_8.g4074 Utricularia gibba HOM05D000920 ORTHO05D004854 2.9e-10 67.4 41 80.5
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 6.5e-10 66.2 32 93.8
BNapus_Darmor_BZH_scaffold_85p00030 Brassica napus HOM05D000920 ORTHO05D004854 6.5e-10 66.2 31 96.8
A05p22400 Brassica napus HOM05D000920 ORTHO05D004854 8.5e-10 65.9 31 93.5
A06p24970 Brassica napus HOM05D000920 ORTHO05D004854 1.6e-08 61.6 30 93.3
A09p22260 Brassica napus HOM05D000920 ORTHO05D004854 2.1e-08 61.2 33 87.9
EL10Ac8g19117 Beta vulgaris HOM05D000920 ORTHO05D004854 3.6e-08 60.5 38 76.3
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 5.2e-07 56.6 32 81.2
BNapus_Darmor_BZH_scaffold_107p00210 Brassica napus HOM05D000920 ORTHO05D004854 6.7e-07 56.2 28 92.9


User provided reference genes

Program Settings