Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S030916 Manihot esculenta HOM05D033829 ORTHO05D000378 3.3e-224 781.6 442 100.0
Manes.S041516 Manihot esculenta HOM05D033829 ORTHO05D000378 1.1e-195 686.8 442 91.2
Manes.S026816 Manihot esculenta HOM05D000691 ORTHO05D000922 4.1e-166 588.6 336 91.7
Manes.S030816 Manihot esculenta HOM05D033829 ORTHO05D000378 2.9e-132 476.1 292 99.7
Manes.06G126602 Manihot esculenta HOM05D000691 ORTHO05D000378 1.3e-55 221.5 139 78.4
Hund14991 Selenicereus undatus HOM05D000691 ORTHO05D000378 3.8e-23 113.6 159 37.1
Hund28766 Selenicereus undatus HOM05D000691 ORTHO05D000378 1.1e-22 112.1 122 45.9
Hund28768 Selenicereus undatus HOM05D000691 ORTHO05D000378 1.1e-22 112.1 122 45.9
Hund26399 Selenicereus undatus HOM05D000691 ORTHO05D000378 7.2e-22 109.4 161 39.8
Hund01785 Selenicereus undatus HOM05D000691 ORTHO05D000378 9.4e-22 109.0 187 35.3
Hund10876 Selenicereus undatus HOM05D000691 ORTHO05D000378 2.2e-18 97.8 110 43.6
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.3e-14 84.0 103 37.9
THA.LOC109117174 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.4e-10 69.7 123 28.5
Ah.14g080140 Amaranthus hybridus HOM05D000004 ORTHO05D000002 8.3e-10 69.3 107 31.8
Sp7g05810 Schrenkiella parvula HOM05D000004 ORTHO05D000002 1.1e-09 68.9 131 28.2
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.1e-09 68.9 123 28.5
ATR0026G029 Amborella trichopoda HOM05D000691 ORTHO05D000378 1.4e-09 68.6 103 34.0
Hma1.2p1_0637F.1_g193600 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.2e-09 67.4 117 30.8
Sp4g07530 Schrenkiella parvula HOM05D000691 ORTHO05D000378 3.2e-09 67.4 127 28.3
Hund17998 Selenicereus undatus HOM05D000691 ORTHO05D000378 3.2e-09 67.4 161 29.2
Oeu010110.1 Olea europaea HOM05D000691 ORTHO05D000378 4.1e-09 67.0 131 26.0
Sopen04g014770 Solanum pennellii HOM05D000004 ORTHO05D000002 5.4e-09 66.6 79 41.8
THA.LOC104809135 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.4e-09 66.6 144 25.7
Oeu043549.1 Olea europaea HOM05D000004 ORTHO05D000378 7.0e-09 66.2 120 30.0
Sopen01g013630 Solanum pennellii HOM05D000004 ORTHO05D000002 7.0e-09 66.2 97 35.1
Sopen12g015060 Solanum pennellii HOM05D000691 ORTHO05D000378 9.2e-09 65.9 114 31.6
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 1.2e-08 65.5 131 29.8
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 1.2e-08 65.5 140 28.6
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-08 65.5 102 33.3
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-08 65.1 102 32.4
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 1.6e-08 65.1 103 30.1
Oeu021941.1 Olea europaea HOM05D000691 ORTHO05D000378 1.6e-08 65.1 120 31.7
Sopen07g027860 Solanum pennellii HOM05D000691 ORTHO05D000378 1.6e-08 65.1 104 32.7
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.6e-08 65.1 123 27.6
Sopen05g021280 Solanum pennellii HOM05D000004 ORTHO05D000002 2.0e-08 64.7 79 40.5
Sopen07g016960 Solanum pennellii HOM05D000002 ORTHO05D000001 2.0e-08 64.7 79 40.5
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.7e-08 64.3 125 28.8
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 2.7e-08 64.3 140 28.6
Sopen05g028020 Solanum pennellii HOM05D000691 ORTHO05D000378 2.7e-08 64.3 114 31.6
Sopen10g005990 Solanum pennellii HOM05D000004 ORTHO05D000002 2.7e-08 64.3 79 40.5
Sopen12g010190 Solanum pennellii HOM05D000691 ORTHO05D000378 2.7e-08 64.3 114 29.8
CiPaw.05G045400 Carya illinoinensis HOM05D000691 ORTHO05D000378 3.5e-08 63.9 103 30.1
AUR62015857 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.5e-08 63.9 123 27.6
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 3.5e-08 63.9 108 31.5
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 3.5e-08 63.9 108 31.5
FvH4_1g29810 Fragaria vesca HOM05D000004 ORTHO05D000002 4.6e-08 63.5 108 31.5
FvH4_4g13904 Fragaria vesca HOM05D000004 ORTHO05D000002 4.6e-08 63.5 103 34.0
Hma1.2p1_0177F.1_g077930 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 4.6e-08 63.5 117 29.1
Sopen00g002900 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen02g010330 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen02g012390 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen03g033370 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen04g014160 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen05g012140 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen05g026540 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen06g010510 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen07g025250 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen08g014040 Solanum pennellii HOM05D000691 ORTHO05D000378 4.6e-08 63.5 104 30.8
Sopen08g019200 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen09g023470 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
Sopen11g013950 Solanum pennellii HOM05D000004 ORTHO05D000002 4.6e-08 63.5 79 39.2
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 5.9e-08 63.2 108 31.5
Oeu055027.1 Olea europaea HOM05D000691 ORTHO05D000378 5.9e-08 63.2 120 30.0
Sopen01g046930 Solanum pennellii HOM05D000691 ORTHO05D000378 5.9e-08 63.2 104 30.8
Sopen02g006530 Solanum pennellii HOM05D000004 ORTHO05D000002 5.9e-08 63.2 131 30.5
Sopen10g015830 Solanum pennellii HOM05D000691 ORTHO05D000378 5.9e-08 63.2 104 29.8
AUR62038792 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.8e-08 62.8 166 26.5
Oeu058971.1 Olea europaea HOM05D000004 ORTHO05D000378 7.8e-08 62.8 120 30.0
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 7.8e-08 62.8 106 29.2
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 7.8e-08 62.8 106 29.2
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 7.8e-08 62.8 106 29.2
RcHm_v2.0_Chr4g0401341 Rosa chinensis HOM05D000004 ORTHO05D000002 7.8e-08 62.8 117 32.5
Sopen03g019760 Solanum pennellii HOM05D000004 ORTHO05D000378 7.8e-08 62.8 137 26.3
Sopen10g026170 Solanum pennellii HOM05D000691 ORTHO05D000378 7.8e-08 62.8 103 31.1
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-07 62.4 106 32.1
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.0e-07 62.4 106 32.1
Sopen04g020730 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 62.4 79 39.2
Sopen09g013140 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 62.4 131 29.8
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 62.4 79 39.2
THA.LOC104807978 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.0e-07 62.4 104 30.8
Lj2C116T7 Lonicera japonica HOM05D000691 ORTHO05D000378 1.3e-07 62.0 129 27.1
Sopen10g019040 Solanum pennellii HOM05D000691 ORTHO05D000378 1.3e-07 62.0 114 30.7
Sopen11g020970 Solanum pennellii HOM05D000691 ORTHO05D000378 1.3e-07 62.0 114 31.6
CAN.G4114.1 Capsicum annuum HOM05D000691 ORTHO05D000378 1.7e-07 61.6 104 31.7
Oeu039051.1 Olea europaea HOM05D000004 ORTHO05D008835 1.7e-07 61.6 120 30.0
Sopen07g008180 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 61.6 79 39.2
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-07 61.6 79 39.2
CSS0044219 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D008835 2.3e-07 61.2 99 31.3
Oeu046609.1 Olea europaea HOM05D000004 ORTHO05D000378 2.3e-07 61.2 120 29.2
Sopen00g004130 Solanum pennellii HOM05D000691 ORTHO05D001745 2.3e-07 61.2 111 30.6
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-07 61.2 79 38.0
Sopen01g025680 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-07 61.2 79 39.2
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 2.3e-07 61.2 106 33.0
Sopen09g027070 Solanum pennellii HOM05D000002 ORTHO05D000378 2.3e-07 61.2 104 30.8
AUR62002706 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.0e-07 60.8 123 26.8
AUR62043063 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.0e-07 60.8 123 26.8
COL.COLO4_16141 Corchorus olitorius HOM05D000691 ORTHO05D000378 3.0e-07 60.8 103 31.1
Hma1.2p1_0370F.1_g137540 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.0e-07 60.8 140 24.3
Sopen07g017800 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-07 60.8 79 38.0
Sopen07g017950 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-07 60.8 79 40.5
Sopen11g021550 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-07 60.8 79 38.0
Sopen12g024530 Solanum pennellii HOM05D000004 ORTHO05D000002 3.0e-07 60.8 76 39.5
Oeu013774.1 Olea europaea HOM05D000004 ORTHO05D000378 3.9e-07 60.5 120 28.3
Sopen02g008030 Solanum pennellii HOM05D000004 ORTHO05D000002 3.9e-07 60.5 106 33.0
Sopen04g021910 Solanum pennellii HOM05D000691 ORTHO05D000378 3.9e-07 60.5 104 29.8
CiPaw.15G094100 Carya illinoinensis HOM05D000691 ORTHO05D000378 5.0e-07 60.1 114 29.8
AUR62005604 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.0e-07 60.1 123 26.8
Oeu008229.1 Olea europaea HOM05D000691 ORTHO05D000378 5.0e-07 60.1 104 32.7
Sopen09g016390 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-07 60.1 79 39.2
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 6.6e-07 59.7 106 34.0
Sopen03g013180 Solanum pennellii HOM05D000691 ORTHO05D000378 6.6e-07 59.7 98 30.6
Sopen04g017030 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-07 59.7 106 32.1
Sopen05g015410 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-07 59.7 79 38.0
Sopen06g018330 Solanum pennellii HOM05D000691 ORTHO05D000378 6.6e-07 59.7 98 30.6
Sopen07g022950 Solanum pennellii HOM05D000691 ORTHO05D000378 6.6e-07 59.7 98 30.6
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 6.6e-07 59.7 106 32.1
AL3G47720 Arabidopsis lyrata HOM05D000691 ORTHO05D000378 8.6e-07 59.3 99 30.3
Sopen05g029300 Solanum pennellii HOM05D000691 ORTHO05D000378 8.6e-07 59.3 97 33.0
Sopen10g020250 Solanum pennellii HOM05D000004 ORTHO05D000002 8.6e-07 59.3 79 38.0
Sopen12g015040 Solanum pennellii HOM05D000004 ORTHO05D000002 8.6e-07 59.3 79 39.2
CAN.G500.95 Capsicum annuum HOM05D000691 ORTHO05D000378 1.1e-06 58.9 106 30.2
AUR62005160 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-06 58.9 77 33.8
AUR62009972 Chenopodium quinoa HOM05D000691 ORTHO05D000002 1.1e-06 58.9 123 28.5
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-06 58.9 106 31.1
Sopen02g012540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.9 106 32.1
Sopen07g009540 Solanum pennellii HOM05D000691 ORTHO05D000378 1.1e-06 58.9 114 30.7
Sopen10g020620 Solanum pennellii HOM05D000691 ORTHO05D000378 1.1e-06 58.9 114 28.9
PGSC0003DMG400002344 Solanum tuberosum HOM05D000691 ORTHO05D000378 1.1e-06 58.9 104 30.8
CAN.G1036.12 Capsicum annuum HOM05D000691 ORTHO05D000378 1.5e-06 58.5 106 30.2
AUR62001812 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-06 58.5 138 25.4
Sp4g04190 Schrenkiella parvula HOM05D000004 ORTHO05D000378 1.5e-06 58.5 80 32.5
AUR62001473 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 58.2 123 26.0
AUR62032896 Chenopodium quinoa HOM05D001182 ORTHO05D000378 1.9e-06 58.2 123 26.0
AUR62037541 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 58.2 123 29.3
AUR62039231 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 58.2 123 28.5
AUR62040870 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-06 58.2 123 26.8
Sopen02g009180 Solanum pennellii HOM05D000004 ORTHO05D000002 1.9e-06 58.2 123 31.7
Oeu005834.1 Olea europaea HOM05D000691 ORTHO05D000378 2.5e-06 57.8 115 28.7
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 57.8 106 31.1
Sopen07g011820 Solanum pennellii HOM05D000691 ORTHO05D000378 2.5e-06 57.8 114 28.9
Sopen08g015760 Solanum pennellii HOM05D000004 ORTHO05D000378 2.5e-06 57.8 106 33.0
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-06 57.8 75 37.3
CSS0025611 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 57.4 102 28.4
CSS0026872 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 57.4 102 28.4
CSS0035253 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.3e-06 57.4 102 28.4
AUR62042240 Chenopodium quinoa HOM05D000004 ORTHO05D000378 3.3e-06 57.4 98 30.6
Oeu053644.1 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-06 57.4 122 27.9
Hund04739 Selenicereus undatus HOM05D000691 ORTHO05D000378 3.3e-06 57.4 81 34.6
Sopen00g007000 Solanum pennellii HOM05D000691 ORTHO05D001745 3.3e-06 57.4 114 28.9
Sopen05g005110 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-06 57.4 106 32.1
CSS0026792 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 4.3e-06 57.0 137 24.8
AUR62006162 Chenopodium quinoa HOM05D000394 ORTHO05D000299 4.3e-06 57.0 98 32.7
AUR62010243 Chenopodium quinoa HOM05D000187 ORTHO05D000378 4.3e-06 57.0 98 32.7
AUR62013145 Chenopodium quinoa HOM05D001385 ORTHO05D000378 4.3e-06 57.0 98 32.7
AUR62014239 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.3e-06 57.0 123 26.8
AUR62036824 Chenopodium quinoa HOM05D000691 ORTHO05D000378 4.3e-06 57.0 123 26.8
AUR62036964 Chenopodium quinoa HOM05D000030 ORTHO05D000378 4.3e-06 57.0 98 32.7
Sopen02g008020 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-06 57.0 106 31.1
Sopen04g024190 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-06 57.0 79 36.7
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-06 57.0 95 34.7
CSS0024510 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.6e-06 56.6 123 24.4
FvH4_2g00261 Fragaria vesca HOM05D000691 ORTHO05D000378 5.6e-06 56.6 108 29.6
Sopen05g028610 Solanum pennellii HOM05D000691 ORTHO05D000378 5.6e-06 56.6 114 25.4
Sopen11g025100 Solanum pennellii HOM05D000004 ORTHO05D000002 5.6e-06 56.6 106 29.2
THA.LOC109116810 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.6e-06 56.6 78 35.9
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.3e-06 56.2 123 26.8
ClCG10G006760 Citrullus lanatus HOM05D000691 ORTHO05D000378 7.3e-06 56.2 115 26.1
Duzib128G0055 Durio zibethinus HOM05D000691 ORTHO05D000378 7.3e-06 56.2 103 31.1
HanXRQChr01g0029471 Helianthus annuus HOM05D000691 ORTHO05D000378 7.3e-06 56.2 146 27.4
Oeu039205.1 Olea europaea HOM05D000691 ORTHO05D000378 7.3e-06 56.2 85 32.9
Hund15082 Selenicereus undatus HOM05D000691 ORTHO05D000378 7.3e-06 56.2 68 41.2
Sopen02g010700 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-06 56.2 97 33.0
AUR62004840 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.5e-06 55.8 123 25.2
AUR62020514 Chenopodium quinoa HOM05D005323 ORTHO05D006820 9.5e-06 55.8 98 30.6
AUR62021227 Chenopodium quinoa HOM05D000196 ORTHO05D000378 9.5e-06 55.8 98 30.6
AUR62032358 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.5e-06 55.8 123 26.8
AUR62041848 Chenopodium quinoa HOM05D004398 ORTHO05D005268 9.5e-06 55.8 91 31.9
FvH4_3g10531 Fragaria vesca HOM05D000691 ORTHO05D000378 9.5e-06 55.8 82 32.9
Lj4C714G8 Lonicera japonica HOM05D000691 ORTHO05D000378 9.5e-06 55.8 106 28.3
Oeu031297.1 Olea europaea HOM05D000004 ORTHO05D000378 9.5e-06 55.8 103 28.2
Sopen02g006770 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 55.8 106 29.2
Sopen05g011920 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 55.8 79 36.7
Sopen07g016640 Solanum pennellii HOM05D000004 ORTHO05D000378 9.5e-06 55.8 96 32.3
Sopen08g015530 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 55.8 79 35.4
Sopen10g015550 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 55.8 79 36.7
Sopen11g021390 Solanum pennellii HOM05D000004 ORTHO05D000002 9.5e-06 55.8 79 35.4


User provided reference genes

Program Settings