Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S026416 Manihot esculenta HOM05D000920 ORTHO05D004854 7.2e-17 89.4 41 100.0
BcaB04g16911 Brassica carinata HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
A06p24060 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
A06p24390 Brassica napus HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.18G141021 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.18G143501 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S001308 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S003270 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S005559 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S009810 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S011445 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S014715 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S015369 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S017659 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S019948 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S022652 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S022952 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S023252 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S024152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S024916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S025152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S025316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S025616 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S026116 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S026152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S026552 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S026852 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S026916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S027252 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S027816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S029316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S029452 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S029652 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S029716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S029916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S030316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S030552 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S031416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S032816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S034716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S035316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S035616 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S035916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S037416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S037716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S038216 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S039016 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S040516 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S041716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S043416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S044016 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S045316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S046516 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S047916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S049416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S050716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S051216 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S051716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S053416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S053916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S055316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S055716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S056416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Manes.S056816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Potri.008G224120 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Potri.008G224147 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
Potri.008G224174 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.8e-15 84.7 41 97.6
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
Manes.S028416 Manihot esculenta HOM05D000920 ORTHO05D004854 2.3e-15 84.3 40 97.5
Sc14g0004110 Simmondsia chinensis HOM05D000920 ORTHO05D004854 3.9e-15 83.6 41 95.1
ScUNg0000740 Simmondsia chinensis HOM05D000920 ORTHO05D004854 3.9e-15 83.6 41 95.1
ScUNg0001120 Simmondsia chinensis HOM05D000920 ORTHO05D004854 3.9e-15 83.6 41 95.1
ScUNg0001170 Simmondsia chinensis HOM05D000920 ORTHO05D004854 3.9e-15 83.6 41 95.1
A06p25510 Brassica napus HOM05D000920 ORTHO05D004854 6.7e-15 82.8 40 95.0
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 8.8e-15 82.4 39 97.4
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.8e-15 82.4 39 97.4
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.8e-15 82.4 39 97.4
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 8.8e-15 82.4 39 97.4
Thhalv10028144m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 1.1e-14 82.0 40 92.5
PGSC0003DMG400024428 Solanum tuberosum HOM05D000920 ORTHO05D004854 1.1e-14 82.0 41 92.7
BcaNung05884 Brassica carinata HOM05D000920 ORTHO05D004854 2.0e-14 81.3 39 94.9
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-14 81.3 40 92.5
BNapus_Darmor_BZH_scaffold_107p00560 Brassica napus HOM05D000920 ORTHO05D004854 2.0e-14 81.3 39 94.9
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 2.0e-14 81.3 39 94.9
unitig_548.g34904 Utricularia gibba HOM05D000920 ORTHO05D004854 3.3e-14 80.5 41 92.7
unitig_550.g34863 Utricularia gibba HOM05D000920 ORTHO05D004854 3.3e-14 80.5 41 92.7
unitig_676.g29553 Utricularia gibba HOM05D000920 ORTHO05D004854 3.3e-14 80.5 41 92.7
unitig_99.g29794 Utricularia gibba HOM05D000920 ORTHO05D004854 3.3e-14 80.5 41 92.7
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 5.7e-14 79.7 38 94.7
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 7.4e-14 79.3 40 90.0
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 9.7e-14 79.0 40 90.0
BNapus_Darmor_BZH_scaffold_107p00280 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 37 97.3
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-13 78.2 37 97.3
LjContig00092g0015566 Lotus japonicus HOM05D001828 ORTHO05D001745 1.7e-13 78.2 40 90.0
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 1.7e-13 78.2 39 92.3
unitig_659.g33188 Utricularia gibba HOM05D008864 ORTHO05D004854 1.7e-13 78.2 39 92.3
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 8.2e-13 75.9 40 87.5
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 8.2e-13 75.9 38 92.1
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 8.2e-13 75.9 38 92.1
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 8.2e-13 75.9 38 92.1
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 8.2e-13 75.9 38 92.1
BcaNung06295 Brassica carinata HOM05D000920 ORTHO05D004854 1.1e-12 75.5 37 97.3
Sopen00g002210 Solanum pennellii HOM05D000920 ORTHO05D004854 1.4e-12 75.1 38 86.8
Mapoly4316s0001 Marchantia polymorpha HOM05D000920 ORTHO05D004854 2.4e-12 74.3 41 85.4
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 3.1e-12 73.9 38 86.8
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 3.1e-12 73.9 40 82.5
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 4.1e-12 73.6 38 86.8
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 4.1e-12 73.6 40 82.5
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 5.3e-12 73.2 40 85.0
A05p22590 Brassica napus HOM05D000920 ORTHO05D004854 9.1e-12 72.4 41 82.9
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 5.9e-11 69.7 34 94.1
A09p31330 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-10 68.9 39 84.6
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 1.3e-10 68.6 32 96.9
HPP92_007078 Vanilla planifolia HOM05D000920 ORTHO05D004854 2.9e-10 67.4 33 90.9
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 3.8e-10 67.0 35 91.4
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 6.5e-10 66.2 33 90.9
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-09 65.5 56 62.5
unitig_8.g4074 Utricularia gibba HOM05D000920 ORTHO05D004854 1.1e-09 65.5 41 78.0
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 3.2e-09 63.9 32 90.6
BNapus_Darmor_BZH_scaffold_85p00030 Brassica napus HOM05D000920 ORTHO05D004854 3.2e-09 63.9 31 93.5
A05p22400 Brassica napus HOM05D000920 ORTHO05D004854 4.2e-09 63.5 31 90.3
A09p22260 Brassica napus HOM05D000920 ORTHO05D004854 8.0e-08 59.3 33 84.8
A06p24970 Brassica napus HOM05D000920 ORTHO05D004854 1.0e-07 58.9 30 90.0
EL10Ac8g19117 Beta vulgaris HOM05D000920 ORTHO05D004854 1.4e-07 58.5 38 73.7
BNapus_Darmor_BZH_scaffold_107p00210 Brassica napus HOM05D000920 ORTHO05D004854 4.0e-07 57.0 28 92.9
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 4.0e-07 57.0 32 81.2
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 3.3e-06 53.9 28 85.7
A06p25590 Brassica napus HOM05D000920 ORTHO05D000922 5.7e-06 53.1 23 100.0


User provided reference genes

Program Settings