Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.S008829 Manihot esculenta HOM05D007167 ORTHO05D000922 3.7e-16 87.0 43 100.0
Manes.S055516 Manihot esculenta HOM05D007167 ORTHO05D000922 3.7e-16 87.0 43 100.0
Manes.S056016 Manihot esculenta HOM05D007167 ORTHO05D000922 3.7e-16 87.0 43 100.0
Manes.S024416 Manihot esculenta HOM05D001319 ORTHO05D000922 1.4e-15 85.1 42 100.0
Manes.S030952 Manihot esculenta HOM05D001319 ORTHO05D000922 1.4e-15 85.1 42 100.0
Manes.S055616 Manihot esculenta HOM05D001319 ORTHO05D000922 1.4e-15 85.1 42 100.0
Migut.O00649 Erythranthe guttata HOM05D001319 ORTHO05D000922 1.5e-12 75.1 42 88.1
Potri.008G224111 Populus trichocarpa HOM05D007167 ORTHO05D000922 3.3e-12 73.9 43 86.0
PGSC0003DMG400034963 Solanum tuberosum HOM05D007167 ORTHO05D000922 3.3e-12 73.9 41 87.8
PGSC0003DMG400039430 Solanum tuberosum HOM05D007167 ORTHO05D000922 3.3e-12 73.9 41 87.8
Potri.008G224701 Populus trichocarpa HOM05D007167 ORTHO05D000922 9.5e-12 72.4 39 89.7
Sopen00g004060 Solanum pennellii HOM05D001828 ORTHO05D001745 9.5e-12 72.4 39 84.6
unitig_813.g34371 Utricularia gibba HOM05D007167 ORTHO05D000922 2.8e-11 70.9 41 82.9
BcaB04g16894 Brassica carinata HOM05D001319 ORTHO05D000922 8.1e-11 69.3 39 89.7
Carub.0002s0966 Capsella rubella HOM05D001319 ORTHO05D000922 8.1e-11 69.3 39 89.7
Carub.0026s0006 Capsella rubella HOM05D001319 ORTHO05D000922 8.1e-11 69.3 39 89.7
Thhalv10028274m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 8.1e-11 69.3 39 89.7
Thhalv10028342m.g Eutrema salsugineum HOM05D001319 ORTHO05D000922 8.1e-11 69.3 39 89.7
CiPaw.15G100800 Carya illinoinensis HOM05D001319 ORTHO05D000922 1.8e-10 68.2 40 80.0
Sopen00g007010 Solanum pennellii HOM05D007167 ORTHO05D000922 2.3e-10 67.8 36 88.9
CiPaw.15G104600 Carya illinoinensis HOM05D001319 ORTHO05D000922 3.1e-10 67.4 37 86.5
CiPaw.15G105500 Carya illinoinensis HOM05D001319 ORTHO05D000922 3.1e-10 67.4 37 86.5
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 3.1e-10 67.4 38 86.8
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.1e-10 67.4 38 86.8
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.1e-10 67.4 38 86.8
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 3.1e-10 67.4 38 86.8
ScUNg0000510 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.1e-10 67.4 38 86.8
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
ScUNg0000950 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.1e-10 67.4 38 86.8
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.1e-10 67.4 38 86.8
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.1e-10 67.4 38 86.8
Migut.A01243 Erythranthe guttata HOM05D001319 ORTHO05D000922 4.0e-10 67.0 36 88.9
ScUNg0001100 Simmondsia chinensis HOM05D007167 ORTHO05D000922 5.2e-10 66.6 36 88.9
BcaC06g35655 Brassica carinata HOM05D001319 ORTHO05D000922 1.5e-09 65.1 39 84.6
Glyma.13G012200 Glycine max HOM05D007167 ORTHO05D000922 4.4e-09 63.5 40 82.5
Glyma.U007802 Glycine max HOM05D001319 ORTHO05D000922 4.4e-09 63.5 40 82.5
Lj2g0014759 Lotus japonicus HOM05D001319 ORTHO05D000922 4.4e-09 63.5 40 82.5
Lj6g0022573 Lotus japonicus HOM05D001319 ORTHO05D000922 4.4e-09 63.5 40 82.5
LjContig00006g0020595 Lotus japonicus HOM05D001319 ORTHO05D000922 4.4e-09 63.5 40 82.5
LjContig00488g0020088 Lotus japonicus HOM05D001319 ORTHO05D000922 4.4e-09 63.5 40 82.5
BcaC03g17344 Brassica carinata HOM05D000920 ORTHO05D000922 5.8e-09 63.2 39 84.6
Cre14.g634322 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 9.9e-09 62.4 39 74.4
Cre14.g634365 Chlamydomonas reinhardtii HOM05D007167 ORTHO05D000922 9.9e-09 62.4 39 74.4
MELO3C027007.2 Cucumis melo HOM05D007167 ORTHO05D000922 2.2e-08 61.2 42 73.8
Cpa.g.sc0.66 Carica papaya HOM05D007167 ORTHO05D000922 2.9e-08 60.8 35 82.9
Migut.A01195 Erythranthe guttata HOM05D001319 ORTHO05D000922 2.9e-08 60.8 35 82.9
EL10Ac4g08190 Beta vulgaris HOM05D007167 ORTHO05D000922 6.4e-08 59.7 31 90.3
A06p26520 Brassica napus HOM05D007167 ORTHO05D000922 8.4e-08 59.3 33 87.9
Psat0s1917g0080 Pisum sativum HOM05D001828 ORTHO05D001745 8.4e-08 59.3 37 81.1
Nn213s45230 Nelumbo nucifera HOM05D001319 ORTHO05D000922 3.2e-07 57.4 33 84.8
Nn236s45578 Nelumbo nucifera HOM05D001319 ORTHO05D000922 3.2e-07 57.4 33 84.8
Nn3g20492 Nelumbo nucifera HOM05D001319 ORTHO05D000922 3.2e-07 57.4 33 84.8
BcaNung07382 Brassica carinata HOM05D000920 ORTHO05D000922 1.2e-06 55.5 31 87.1
PGSC0003DMG400043107 Solanum tuberosum HOM05D007167 ORTHO05D000922 3.5e-06 53.9 34 76.5
unitig_135.g35492 Utricularia gibba HOM05D007167 ORTHO05D000922 3.5e-06 53.9 28 85.7


User provided reference genes

Program Settings