Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G138354 Manihot esculenta HOM05D005034 ORTHO05D006234 2.1e-46 188.7 99 100.0
RcHm_v2.0_CPg0502821 Rosa chinensis HOM05D005034 ORTHO05D006234 7.5e-36 153.7 95 83.2
Potri.001G342966 Populus trichocarpa HOM05D005034 ORTHO05D006234 9.8e-36 153.3 95 81.1
CAN.G1045.13 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-34 149.8 94 80.9
CAN.G134.8 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-34 149.8 94 80.9
CAN.G1526.4 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-34 149.8 94 80.9
CAN.G278.5 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-34 149.8 94 80.9
CAN.G413.9 Capsicum annuum HOM05D005034 ORTHO05D006234 1.1e-34 149.8 94 80.9
Hma1.2p1_0665F.1_g199050 Hydrangea macrophylla HOM05D005034 ORTHO05D006234 1.4e-34 149.4 91 83.5
PGR111G0056 Punica granatum HOM05D005034 ORTHO05D006234 1.4e-34 149.4 95 81.1
Sed0006489 Sechium edule HOM05D005034 ORTHO05D006234 5.4e-34 147.5 98 79.6
Sed0013321 Sechium edule HOM05D005034 ORTHO05D006234 5.4e-34 147.5 98 79.6
Sed0020615 Sechium edule HOM05D005034 ORTHO05D006234 5.4e-34 147.5 98 79.6
Solyc00g500085.1 Solanum lycopersicum HOM05D005034 ORTHO05D006234 9.2e-34 146.7 92 79.3
Gohir.1Z049831 Gossypium hirsutum HOM05D005034 ORTHO05D006234 2.0e-33 145.6 99 78.8
Gohir.A02G134200 Gossypium hirsutum HOM05D005034 ORTHO05D006234 2.0e-33 145.6 99 78.8
Gohir.A10G117233 Gossypium hirsutum HOM05D005034 ORTHO05D006234 2.0e-33 145.6 99 78.8
HanXRQChr00c0690g0576751 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr02g0059701 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr05g0152421 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr06g0182991 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr08g0212001 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr09g0258531 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr11g0323731 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQChr13g0413491 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
HanXRQCPg0580361 Helianthus annuus HOM05D005034 ORTHO05D006234 1.0e-32 143.3 95 75.8
Nn064s42213 Nelumbo nucifera HOM05D005034 ORTHO05D006234 2.9e-32 141.7 95 78.9
Nn212s45210 Nelumbo nucifera HOM05D005034 ORTHO05D006234 2.9e-32 141.7 95 78.9
Lalb_Chr07g0191731 Lupinus albus HOM05D005034 ORTHO05D006234 5.0e-32 141.0 94 78.7
Medtr4g006130 Medicago truncatula HOM05D005034 ORTHO05D006234 6.6e-32 140.6 95 76.8
PSO548G0041 Papaver somniferum HOM05D005034 ORTHO05D006234 6.6e-32 140.6 95 77.9
CSS0025903 Camellia sinensis var. sinensis HOM05D005034 ORTHO05D006234 4.3e-31 137.9 94 76.6
Lj2P1238T83 Lonicera japonica HOM05D005034 ORTHO05D006234 5.6e-31 137.5 96 74.0
SalBow1G5942 Salvia bowleyana HOM05D005034 ORTHO05D006234 7.3e-31 137.1 95 73.7
Solyc11g021210.2 Solanum lycopersicum HOM05D005034 ORTHO05D006234 7.3e-31 137.1 94 73.4
DCAR_032535 Daucus carota HOM05D005034 ORTHO05D006234 9.5e-31 136.7 95 76.8
LjContig00318g0021446 Lotus japonicus HOM05D005034 ORTHO05D006234 9.5e-31 136.7 95 74.7
LjContig00319g0026028 Lotus japonicus HOM05D005034 ORTHO05D006234 9.5e-31 136.7 95 74.7
Lj9P89T19 Lonicera japonica HOM05D005034 ORTHO05D006234 3.6e-30 134.8 96 74.0
Peaxi162Scf01164g00036 Petunia axillaris HOM05D005034 ORTHO05D006234 4.7e-30 134.4 106 69.8
arahy.Tifrunner.gnm1.ann1.ZFUC3L Arachis hypogaea HOM05D005034 ORTHO05D006234 8.0e-30 133.7 95 71.6
ATCG01040 Arabidopsis thaliana HOM05D005034 ORTHO05D006234 4.0e-29 131.3 98 70.4
BolC2t10593H Brassica oleracea HOM05D005034 ORTHO05D006234 8.9e-29 130.2 99 68.7
BraSC103t45426Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-28 129.0 98 68.4
BraSC138t45537Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-28 129.0 98 68.4
BraSC179t45777Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-28 129.0 98 68.4
BraSC25t45907Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-28 129.0 98 68.4
BraSC59t46548Z Brassica rapa HOM05D005034 ORTHO05D006234 2.0e-28 129.0 98 68.4
C07p33420 Brassica napus HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
C09p40380 Brassica napus HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
BolSC29t60503H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
BolSC35t60695H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
BolSC35t60701H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
BolSC46t60961H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
BolSC47t61067H Brassica oleracea HOM05D005034 ORTHO05D006234 3.4e-28 128.3 98 68.4
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 4.4e-28 127.9 89 74.2
Gohir.D01G134300 Gossypium hirsutum HOM05D005034 ORTHO05D006234 1.3e-27 126.3 99 71.7
BolSC49t61140H Brassica oleracea HOM05D005034 ORTHO05D006234 1.7e-27 125.9 96 67.7
BraSC143t45663Z Brassica rapa HOM05D005034 ORTHO05D006234 2.2e-27 125.6 96 66.7
BolSC29t60543H Brassica oleracea HOM05D005034 ORTHO05D006234 2.9e-27 125.2 97 68.0
Nitab4.5_0000100g0130 Nicotiana tabacum HOM05D005034 ORTHO05D006234 3.7e-27 124.8 86 74.4
BolC9t56928H Brassica oleracea HOM05D005034 ORTHO05D006234 2.7e-25 118.6 99 63.6
BolC6t36207H Brassica oleracea HOM05D005034 ORTHO05D006234 4.6e-25 117.9 98 64.3
Hund25564 Selenicereus undatus HOM05D005034 ORTHO05D006234 2.1e-22 109.0 95 66.3
Lalb_Chr05g0227101 Lupinus albus HOM05D005034 ORTHO05D006234 2.6e-20 102.1 65 83.1
HanXRQChr09g0251521 Helianthus annuus HOM05D005034 ORTHO05D006234 3.7e-19 98.2 62 74.2
Eucgr.C03526 Eucalyptus grandis HOM05D005034 ORTHO05D006234 2.4e-18 95.5 51 86.3
Migut.D01256 Erythranthe guttata HOM05D005034 ORTHO05D006234 3.2e-18 95.1 58 74.1
GSVIVG01004975001 Vitis vinifera HOM05D005034 ORTHO05D006234 9.2e-18 93.6 51 86.3
MBI10_g47592_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 2.0e-17 92.4 67 71.6
Gohir.D03G077700 Gossypium hirsutum HOM05D005034 ORTHO05D006234 8.6e-16 87.0 53 77.4
Oeu010692.1 Olea europaea HOM05D005034 ORTHO05D006234 7.3e-15 84.0 51 76.5
arahy.Tifrunner.gnm1.ann1.RW0ZF5 Arachis hypogaea HOM05D005034 ORTHO05D006234 3.6e-14 81.6 57 66.7
Ciclev10010882m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
Ciclev10013963m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
Ciclev10018423m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
Ciclev10027633m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
Ciclev10027652m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
Ciclev10030457m.g Citrus clementina HOM05D005034 ORTHO05D006234 7.5e-12 73.9 51 64.7
HanXRQChr17g0557781 Helianthus annuus HOM05D005034 ORTHO05D006234 7.8e-09 63.9 95 47.4
PRCOL_00005002 Prasinoderma coloniale HOM05D005034 ORTHO05D006234 6.2e-06 54.3 44 59.1
Pp3c2_30980 Physcomitrium patens HOM05D005034 ORTHO05D006234 8.1e-06 53.9 86 37.2


User provided reference genes

Program Settings