Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 4.9e-274 947.2 479 100.0
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 5.7e-230 800.8 479 83.5
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 7.9e-224 780.4 479 80.8
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 2.3e-223 778.9 478 81.6
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 6.7e-223 777.3 496 79.4
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 1.9e-222 775.8 479 81.8
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.4e-222 773.9 477 81.1
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 2.2e-221 772.3 479 81.0
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 2.8e-221 771.9 479 81.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.8e-221 771.9 474 81.4
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.7e-221 771.5 477 81.1
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 5.0e-218 761.1 479 79.7
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 5.0e-218 761.1 479 80.2
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 1.9e-217 759.2 479 79.7
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 5.5e-217 757.7 480 79.4
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.2e-216 756.5 479 78.7
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 6.1e-216 754.2 479 79.1
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 7.9e-216 753.8 479 78.5
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.0e-215 753.4 479 78.5
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 1.8e-215 752.7 479 78.5
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.8e-215 752.7 479 78.1
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 6.7e-215 750.7 477 79.7
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 6.7e-215 750.7 480 79.8
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.1e-214 750.0 479 78.9
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 4.3e-214 748.0 480 79.0
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 3.7e-213 745.0 515 74.6
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 8.2e-213 743.8 479 77.9
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 1.8e-212 742.7 479 78.7
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 1.2e-211 740.0 479 77.9
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.0e-210 736.9 479 77.7
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 2.9e-210 735.3 479 78.3
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 3.8e-210 734.9 479 77.9
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 5.0e-210 734.6 479 76.4
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 1.9e-209 732.6 480 77.9
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 4.2e-209 731.5 477 78.8
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 7.2e-209 730.7 476 77.5
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 1.6e-208 729.6 479 78.1
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 7.9e-208 727.2 480 77.5
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 1.0e-207 726.9 480 77.1
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 1.0e-207 726.9 481 78.6
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 3.0e-207 725.3 479 76.0
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 3.3e-206 721.8 475 77.1
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 9.7e-206 720.3 479 77.2
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.7e-202 709.5 477 73.2
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 3.8e-202 708.4 477 75.5
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 2.5e-201 705.7 479 73.7
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 7.2e-201 704.1 479 75.4
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 1.2e-200 703.4 479 74.5
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 1.0e-199 700.3 510 70.8
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.0e-199 700.3 479 73.3
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 1.0e-199 700.3 481 72.8
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 5.2e-199 698.0 485 71.8
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 6.7e-199 697.6 479 73.7
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 8.8e-199 697.2 477 73.4
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 8.8e-199 697.2 485 71.8
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 1.1e-198 696.8 485 71.5
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.5e-198 696.4 480 74.4
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 2.0e-198 696.0 485 71.5
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 9.7e-198 693.7 421 81.9
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 1.3e-197 693.3 480 74.6
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 8.2e-197 690.6 479 72.7
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.1e-196 690.3 481 74.0
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 1.8e-196 689.5 479 72.2
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 3.1e-196 688.7 480 73.5
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 9.1e-196 687.2 477 75.5
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 4.5e-195 684.9 478 72.4
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 4.5e-195 684.9 479 73.7
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 7.7e-195 684.1 478 71.3
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 2.9e-194 682.2 477 72.7
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.5e-193 679.9 478 73.4
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 3.6e-192 675.2 480 72.3
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 3.6e-192 675.2 480 72.3
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 3.6e-192 675.2 480 72.3
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 4.7e-192 674.9 480 71.9
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 5.2e-191 671.4 480 72.1
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 5.7e-190 667.9 480 71.2
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 1.4e-188 663.3 480 71.2
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 5.4e-188 661.4 477 70.9
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.5e-185 653.3 480 71.2
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 1.0e-183 647.1 421 77.9
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 2.3e-183 646.0 473 73.2
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 3.0e-183 645.6 478 69.5
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 8.8e-183 644.0 533 64.5
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 2.0e-182 642.9 479 69.3
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 6.6e-178 627.9 486 66.0
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.8e-176 622.5 479 69.1
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 6.1e-176 621.3 478 68.4
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 8.0e-176 620.9 496 65.5
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 3.0e-175 619.0 375 84.0
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 1.2e-174 617.1 476 68.1
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.6e-174 615.9 423 72.3
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 5.7e-174 614.8 442 72.4
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 7.5e-174 614.4 479 67.6
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.9e-173 612.5 375 81.1
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 5.4e-172 608.2 469 66.7
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 2.7e-171 605.9 477 66.9
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 4.3e-169 598.6 580 57.9
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 5.6e-169 598.2 480 66.9
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 2.6e-166 589.3 432 72.5
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.7e-163 579.3 383 74.7
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 2.1e-155 553.1 377 72.7
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 5.1e-154 548.5 478 60.9
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 2.5e-153 546.2 486 59.5
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 8.4e-149 531.2 338 79.3
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.0e-143 512.3 311 82.3
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 7.9e-131 471.5 809 38.9
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 7.3e-129 464.9 316 75.6
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 4.0e-127 459.1 345 68.1
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 2.2e-125 453.4 477 52.6
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 1.3e-120 437.6 375 59.5
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 6.9e-119 431.8 452 54.0
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.5e-116 423.3 452 52.9
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 3.2e-116 422.9 450 51.6
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 7.1e-116 421.8 452 53.1
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 5.1e-114 415.6 453 51.9
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 1.1e-113 414.5 453 51.9
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 2.5e-113 413.3 475 50.9
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 2.5e-113 413.3 450 52.0
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 6.5e-109 398.7 453 51.0
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 7.9e-107 391.7 369 56.4
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.9e-105 387.1 370 55.7
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 9.7e-105 384.8 444 49.3
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 6.5e-101 372.1 404 52.2
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 1.8e-98 364.0 404 52.0
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 2.2e-96 357.1 249 73.1
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 2.2e-96 357.1 228 77.2
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 3.4e-94 349.7 240 73.8
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.4e-92 344.4 494 41.9
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 1.1e-89 334.7 450 46.2
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 7.2e-84 315.5 250 65.2
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 2.7e-78 297.0 490 39.4
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 6.1e-59 232.6 309 45.3
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 3.7e-56 223.4 191 61.3
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 1.2e-51 208.4 210 54.3
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 2.2e-48 197.6 204 51.0
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 3.6e-43 180.3 445 31.5
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 6.8e-42 176.0 102 80.4
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 7.1e-39 166.0 522 29.5
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 3.5e-38 163.7 106 72.6
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 1.0e-21 109.0 90 58.9
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 4.9e-16 90.1 77 62.3
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 7.1e-15 86.3 143 37.1
SEGI_07227 Sequoiadendron giganteum HOM05D001663 ORTHO05D015595 3.8e-08 63.9 88 37.5


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